mRNA_H-elongata_contig63961.13982.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: D8LE92_ECTSI (Mannosyl-oligosaccharide glucosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE92_ECTSI) HSP 1 Score: 220 bits (560), Expect = 3.770e-64 Identity = 101/128 (78.91%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 82 RDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
RD LWSPHGLRSLSASDP YQVENNPGDEPYWRGHIWVNVNYLALAAL HYSQ +GPFR++ IY+ELR NLL TLLGG+ STG+FWEQYDDR+G GLRSHPFTGWTALVVLIMAEIY
Sbjct: 780 RDSTQLWSPHGLRSLSASDPFYQVENNPGDEPYWRGHIWVNVNYLALAALSHYSQAEGPFRKDAG-------RIYTELRTNLLRTLLGGYQSTGYFWEQYDDRSGRGLRSHPFTGWTALVVLIMAEIY 900
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: A0A7S3XS34_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS34_HETAK) HSP 1 Score: 170 bits (430), Expect = 2.920e-50 Identity = 76/128 (59.38%), Postives = 89/128 (69.53%), Query Frame = 1
Query: 82 RDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
RD LWSPHG+RSLS SD Y EN PGD PYWRG+IW+N+NYL L L HY VDGP+R+ R +Y ELR N++ T+LG + TG+FWEQY D G GLRSHPFTGWTALV+ IM E Y
Sbjct: 123 RDENELWSPHGVRSLSKSDLFYGRENAPGDAPYWRGYIWINMNYLVLDGLHHYGAVDGPYRE-------RCRALYEELRENVMQTVLGSYERTGYFWEQYHDVTGQGLRSHPFTGWTALVLHIMGETY 243
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: A0A835YSL1_9STRA (Glycoside hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL1_9STRA) HSP 1 Score: 172 bits (436), Expect = 2.310e-49 Identity = 79/150 (52.67%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 16 PVKTPRLKAVLNTDGANVERSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P +PRL +L+ DP HLWS +GLRSLS SDP Y NNPGD+PYWRG+IW+N+N+LA AAL HYS+ GP ++ R ++Y+ LR N+L+T+LG F TG+FWEQYDD G G R HPFTGWTA V+ I+ E Y
Sbjct: 270 PPDSPRLPPLLDLLA--------DPTHLWSEYGLRSLSKSDPFYLKANNPGDQPYWRGYIWININFLACAALHHYSKQSGPIQE-------RSADLYANLRGNILTTVLGEFQRTGYFWEQYDDATGHGRRGHPFTGWTATVLNIITEQY 404
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: UPI0019C309C8 (mannosyl-oligosaccharide glucosidase n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019C309C8) HSP 1 Score: 172 bits (436), Expect = 5.370e-47 Identity = 79/149 (53.02%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 28 PRLKAVLNTDGANVE---RSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P L +L D +E + RDP LW+P+GLRSLS SDP+Y N D PYWRG IW+N+NYLAL AL HYS ++GP+R+E EIY ELR N+++ + +H TG+ WEQY+D G G SHPFTGW+ALVVLIMAE Y
Sbjct: 700 PFLLHILTPDSQKLEHILKDIRDPTRLWTPYGLRSLSRSDPIYMKRNTEHDAPYWRGAIWININYLALKALHHYSSIEGPYREEAA-------EIYQELRTNVVNNIYKQYHETGYIWEQYNDGTGRGQGSHPFTGWSALVVLIMAEDY 841
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: W5UIZ1_ICTPU (Mannosyl-oligosaccharide glucosidase n=3 Tax=Ictaluridae TaxID=7996 RepID=W5UIZ1_ICTPU) HSP 1 Score: 168 bits (425), Expect = 1.750e-45 Identity = 76/149 (51.01%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 28 PRLKAVLNTDGANVE---RSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P L VL D +E + RDP LW+P+GLRSLS SDP+Y N D PYWRG IW+N+NYLAL AL HYS +DGP+++ ++Y ELR N+++ + +H TG+ WEQY D G G SHPFTGW+AL+VLIMAE Y
Sbjct: 699 PFLLHVLTPDSQKLEHILKDIRDPARLWTPYGLRSLSRSDPIYMKRNTEHDLPYWRGAIWININYLALRALHHYSSIDGPYQETAS-------DLYQELRTNIINNIYKQYHETGYIWEQYSDSTGRGQGSHPFTGWSALIVLIMAEEY 840
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: A0A5N5JGJ1_PANHP (Mannosyl-oligosaccharide glucosidase n=4 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5JGJ1_PANHP) HSP 1 Score: 168 bits (425), Expect = 1.840e-45 Identity = 76/149 (51.01%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 28 PRLKAVLNTDGANVE---RSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P L VL D +E + RDP HLW+P+GLRSLS DPLY N D PYWRG IW+N+NYLAL AL HYS ++GP+++ + ++Y ELR N+++ + +H TG+ WEQY D G G SHPFTGW+AL VLIMAE Y
Sbjct: 714 PFLLHVLTPDSKKLEHTLKDIRDPVHLWTPYGLRSLSRLDPLYMKHNTEHDPPYWRGAIWININYLALRALHHYSSIEGPYQE-------KAADLYQELRTNVINNIYKQYHETGYIWEQYSDSTGQGQGSHPFTGWSALTVLIMAEEY 855
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: A0A8C1CZ17_CYPCA (Mannosyl-oligosaccharide glucosidase n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1CZ17_CYPCA) HSP 1 Score: 164 bits (414), Expect = 7.370e-45 Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 1
Query: 28 PRLKAVLNTDGANVE---RSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P L +L D +E R +DP+ LW+P+GLRSLS SDPLY N D PYWRG IW+N+NYLA+ AL HY ++GP++++ T +Y +LR NL++ + + TG+ WEQY+D G G SHPFTGW+AL+VLIMAE Y
Sbjct: 430 PFLLQILTPDSPKIEHILRDIQDPERLWTPYGLRSLSHSDPLYMKRNTEHDAPYWRGPIWININYLAVRALHHYGSIEGPYKKKAAT-------LYQDLRTNLINNVYKQYMETGYIWEQYNDSTGRGQGSHPFTGWSALIVLIMAEEY 571
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: UPI000F4F51CE (mannosyl-oligosaccharide glucosidase n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4F51CE) HSP 1 Score: 165 bits (418), Expect = 1.600e-44 Identity = 73/149 (48.99%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 28 PRLKAVLNTDGANVE---RSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P L +L D +E + DP LW+P+GLRSLS SDP+Y N D PYWRG IW+N+NYLAL AL HYS+++GP+++ + E+Y ELR N+++ + +H TG+ WEQY D G G HPFTGW+AL+VLIMAE Y
Sbjct: 699 PFLLHILTPDSQKLEYILKDIHDPARLWTPYGLRSLSRSDPMYMKRNTEHDAPYWRGPIWININYLALRALHHYSRIEGPYQE-------KAAELYQELRTNVINNIYKQYHETGYIWEQYSDSTGRGQGCHPFTGWSALIVLIMAEEY 840
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: F0WCG1_9STRA (Mannosyl-oligosaccharide glucosidase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCG1_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.020e-44 Identity = 81/156 (51.92%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 16 PVKTPRLKAVLNTDGANVERSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRN------GAGLRSHPFTGWTALVVLIMAEIY 465
P TP+L+A+L S RDP HLW+P+GLRSLS DP ++V N P D+PYWRG IW+NVNYLAL AL +YS+ DGP++Q I+ + Y+ELR N++S + + TG+FWEQY+ G G RSHPFTGWT+LVV IMAE+Y
Sbjct: 827 PADTPQLEALL--------MSIRDPAHLWTPYGLRSLSTRDPFFEVGNRPDDKPYWRGAIWINVNYLALDALMYYSKQDGPYQQ---MIK----DTYTELRQNVISNIYSEYLRTGYFWEQYNGNARMKKSFGRGKRSHPFTGWTSLVVNIMAEVY 967
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Match: A0A556V483_BAGYA (Mannosyl-oligosaccharide glucosidase n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556V483_BAGYA) HSP 1 Score: 165 bits (417), Expect = 2.190e-44 Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 28 PRLKAVLNTDGANVE---RSDRDPKHLWSPHGLRSLSASDPLYQVENNPGDEPYWRGHIWVNVNYLALAALRHYSQVDGPFRQERWTIRFRRWEIYSELRANLLSTLLGGFHSTGHFWEQYDDRNGAGLRSHPFTGWTALVVLIMAEIY 465
P L +L D +E + RDP LW+P+GLRSLS SDP+Y N D PYWRG IW+N+NYLAL AL HYS ++GP++ + E+Y ELRAN+++ + + +G+ WEQY D G G SHPFTGW+AL+VLIMAE Y
Sbjct: 699 PFLLHILTPDSQKLEHVLKDVRDPARLWTPYGLRSLSRSDPMYMKRNTEHDAPYWRGSIWININYLALRALHHYSSIEGPYQ-------LKAAELYQELRANVINNIYKQYDESGYIWEQYSDSTGRGQGSHPFTGWSALIVLIMAEEY 840 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63961.13982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63961.13982.1 >prot_H-elongata_contig63961.13982.1 ID=prot_H-elongata_contig63961.13982.1|Name=mRNA_H-elongata_contig63961.13982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp LHHASPVKTPRLKAVLNTDGANVERSDRDPKHLWSPHGLRSLSASDPLYQback to top mRNA from alignment at H-elongata_contig63961:2677..3403- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63961.13982.1 ID=mRNA_H-elongata_contig63961.13982.1|Name=mRNA_H-elongata_contig63961.13982.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=727bp|location=Sequence derived from alignment at H-elongata_contig63961:2677..3403- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63961:2677..3403- >mRNA_H-elongata_contig63961.13982.1 ID=mRNA_H-elongata_contig63961.13982.1|Name=mRNA_H-elongata_contig63961.13982.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig63961:2677..3403- (Himanthalia elongata Himel1 dioecious)back to top |