prot_H-elongata_contig63880.13967.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig63880.13967.1
Unique Name	prot_H-elongata_contig63880.13967.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	105

Homology

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BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 3.130e-61
Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSKKSAKAPKKAG KK+TNKR ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 7.400e-54
Identity = 90/105 (85.71%), Postives = 99/105 (94.29%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSKKSAKAPKKAG K K  KR ESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSE
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSE 119

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 172 bits (436), Expect = 9.880e-54
Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAG-GKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAK PSKK+AKAPKKA  GKKK  KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSE 106

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 171 bits (434), Expect = 1.760e-53
Identity = 89/105 (84.76%), Postives = 100/105 (95.24%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSKK+AKAPKKAG K+  NKR+E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSE 103

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.060e-53
Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAG--GKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSKKSAKAPKK G  GK +  KRIESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSE 107

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A7S4S1B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S1B0_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.270e-52
Identity = 89/106 (83.96%), Postives = 99/106 (93.40%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKK-TNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSK+SAK PKKAG KKK + KR+ESYSSYIYKV+KQVHPDTGISK+GMSIMNSFI D+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    1 MAKTPSKQSAKPPKKAGDKKKRSKKRVESYSSYIYKVMKQVHPDTGISKKGMSIMNSFIKDIFERIATEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSE 106

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 5.950e-52
Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAG-GKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAK PSKK+AKAPKKA  GKKK  KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSE 239

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 167 bits (424), Expect = 7.330e-52
Identity = 90/105 (85.71%), Postives = 99/105 (94.29%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSKK+A APKKAGGK ++ KR ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    8 MAKTPSKKAA-APKKAGGK-RSRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSE 110

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 167 bits (423), Expect = 8.890e-52
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSK+SAKAPKKA    K+ KR E+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSE 105

[Close]

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Match: A0A7S2U5X6_9STRA (Histone H2B (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5X6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.550e-51
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 0

Query:    1 MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSE 105
            MAKTPSKKSA  PKKA   K+  KR+ESYSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSE
Sbjct:    6 MAKTPSKKSA-VPKKASTGKRNKKRVESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSE 109

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot

BLAST of mRNA_H-elongata_contig63880.13967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	3.130e-61	97.14	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6U0X3U9_9STRA	7.400e-54	85.71	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	9.880e-54	87.74	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
H2B_OLILU	1.760e-53	84.76	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
A0A485K2U0_9STRA	2.060e-53	85.05	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
A0A7S4S1B0_9STRA	2.270e-52	83.96	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A836CJT3_9STRA	5.950e-52	87.74	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A6U6DWX5_9STRA	7.330e-52	85.71	Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ...	[more]
B7FWR8_PHATC	8.890e-52	83.81	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
A0A7S2U5X6_9STRA	2.550e-51	83.81	Histone H2B (Fragment) n=1 Tax=Attheya septentrion...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 29..47 score: 84.56 coord: 48..68 score: 67.66 coord: 100..105 score: 41.97 coord: 70..87 score: 56.83 coord: 87..100 score: 90.61
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 19..105 e-value: 4.6E-55 score: 198.9
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 6..105
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 3..92 e-value: 2.9E-17 score: 63.3
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..105 e-value: 5.1E-50 score: 170.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig63880	contig	H-elongata_contig63880:2148..2462 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig63880.13967.1	mRNA_H-elongata_contig63880.13967.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig63880 2148..2462 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig63880.13967.1 ID=prot_H-elongata_contig63880.13967.1|Name=mRNA_H-elongata_contig63880.13967.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MAKTPSKKSAKAPKKAGGKKKTNKRIESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold