mRNA_H-elongata_contig63840.13960.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: D8LCV2_ECTSI (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV2_ECTSI) HSP 1 Score: 167 bits (422), Expect = 4.080e-48 Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQSFVVACA+LAHN+HELR GR++ NHTFSAMLLLPFI TTL LLR+NWYPAR FVGDTYCYFAGMTFA VGIHGHFSKTLILMF+PQV
Sbjct: 246 GQSFVVACAILAHNMHELRRGRDTGNHTFSAMLLLPFIGTTLGLLRYNWYPARAFVGDTYCYFAGMTFAVVGIHGHFSKTLILMFLPQV 334
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A7S0FMV2_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMV2_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.480e-35 Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGR-NSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+V+ CAVL HN+ E+R G +SENH FS M++L FIS TLALLR NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQ+
Sbjct: 282 GQSYVMGCAVLFHNLIEIRLGTASSENHLFSVMIMLSFISVTLALLRHNWYPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQI 371
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: K0R4D1_THAOC (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4D1_THAOC) HSP 1 Score: 132 bits (332), Expect = 4.480e-35 Identity = 60/90 (66.67%), Postives = 75/90 (83.33%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRS-GRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+++ C+VL HN+ E+R +SENH FSAM++LPF+ +LALLR NWYPA+VFVGDTYCYFAGMT A VGI GHFSKTL+L F+PQ+
Sbjct: 234 GQSYIIGCSVLLHNLIEIRCRSLSSENHVFSAMIMLPFLGVSLALLRHNWYPAQVFVGDTYCYFAGMTLAVVGISGHFSKTLLLFFIPQL 323
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A7S4NEZ8_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ8_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.770e-35 Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGR-NSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+V+ CAVL HN E+R+G ++ENH FSAM++L F+ TL LLR NWYPA VFVGDT+CYFAGM FA VGI GHFSKTL+L FMPQV
Sbjct: 215 GQSYVIGCAVLFHNFIEIRAGSLSAENHMFSAMIMLSFVGVTLGLLRHNWYPASVFVGDTFCYFAGMAFAVVGILGHFSKTLLLFFMPQV 304
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A8J9X392_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X392_PHATR) HSP 1 Score: 127 bits (318), Expect = 1.050e-34 Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGRN-SENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+V+ CAVL HN+ E+R N ENH FS M++L F+ TL LL+ NW+PA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct: 32 GQSYVIGCAVLVHNLLEIRFHNNLEENHLFSVMVMLSFVGVTLGLLKHNWFPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQV 121
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A1Z5K570_FISSO (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K570_FISSO) HSP 1 Score: 132 bits (331), Expect = 1.170e-34 Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+V+ACAVL HN+ E++ ++NH FS ML+L FI TL LLR NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L+F+PQV
Sbjct: 261 GQSYVIACAVLLHNLMEIQRDGPADNHLFSVMLMLCFIGVTLGLLRHNWYPATVFVGDTFCYFAGMTFAVVGILGHFSKTLLLLFIPQV 349
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: B8BWM8_THAPS (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWM8_THAPS) HSP 1 Score: 129 bits (324), Expect = 2.430e-34 Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGRNS-ENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+V+ CAVL HN+ E+++ + ENH FSAM+LL F+ +LALLR NWYPA VFVGDTYCYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct: 178 GQSYVIGCAVLFHNLIEIQARSIAWENHVFSAMILLSFLGVSLALLRHNWYPASVFVGDTYCYFAGMTFAVVGILGHFSKTLLLFFIPQV 267
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A6U5M6M7_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5M6M7_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.360e-34 Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSG--RNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS++VACA+L HN+ EL S + H FSAM++ F+ TL LLR NWYPARVFVGDTYCYFAGM FA VGIHGHFSKTL+L FMPQV
Sbjct: 308 GQSYIVACAILVHNLLELFSSDATAAAPHLFSAMIMFSFVGVTLGLLRHNWYPARVFVGDTYCYFAGMAFAVVGIHGHFSKTLLLFFMPQV 398
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A448ZTD2_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTD2_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.630e-34 Identity = 61/90 (67.78%), Postives = 71/90 (78.89%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRS-GRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+V+ CA+L HN E+RS ENH FSAM++L F+ TL LLR NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct: 255 GQSYVIGCAILLHNFIEIRSQSLTQENHLFSAMIILSFVGVTLGLLRHNWYPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQV 344
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A7S3V6M9_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6M9_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.110e-33 Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 1
Query: 1 GQSFVVACAVLAHNVHELRSGRNS-ENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 267
GQS+++ CAVL HN+ E++ G + ENH FSAM++L FI T+ALL+ NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct: 316 GQSYIIGCAVLLHNLIEIKHGSYARENHLFSAMIMLSFIGVTMALLKHNWYPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQV 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63840.13960.1 >prot_H-elongata_contig63840.13960.1 ID=prot_H-elongata_contig63840.13960.1|Name=mRNA_H-elongata_contig63840.13960.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp GQSFVVACAVLAHNVHELRSGRNSENHTFSAMLLLPFISTTLALLRFNWYback to top mRNA from alignment at H-elongata_contig63840:300..2602+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63840.13960.1 ID=mRNA_H-elongata_contig63840.13960.1|Name=mRNA_H-elongata_contig63840.13960.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2303bp|location=Sequence derived from alignment at H-elongata_contig63840:300..2602+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63840:300..2602+ >mRNA_H-elongata_contig63840.13960.1 ID=mRNA_H-elongata_contig63840.13960.1|Name=mRNA_H-elongata_contig63840.13960.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=534bp|location=Sequence derived from alignment at H-elongata_contig63840:300..2602+ (Himanthalia elongata Himel1 dioecious)back to top |