prot_H-elongata_contig63795.13953.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63795.13953.1
Unique Nameprot_H-elongata_contig63795.13953.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: D7FJ37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ37_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.770e-52
Identity = 82/93 (88.17%), Postives = 88/93 (94.62%), Query Frame = 0
Query:   12 MIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQMEVRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVR 104
            MIDY +EFLARNDVKEVFVFCVSHAKQLE+YLQSS W + MEVRIITSNNCLSAGDALRDIDQRGVVRSDPF+LVSGDVVSNIDL+ VIK+VR
Sbjct:    1 MIDYTMEFLARNDVKEVFVFCVSHAKQLEEYLQSSTWAAHMEVRIITSNNCLSAGDALRDIDQRGVVRSDPFVLVSGDVVSNIDLKSVIKQVR 93          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A835YX04_9STRA (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX04_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.860e-39
Identity = 66/101 (65.35%), Postives = 81/101 (80.20%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQMEVRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIK 101
            PKVLCPLVN PMIDY LE LA N V+EVFVFCV+HA+QL +YL +  W   MEVR +TS NCLSAGDALR++DQ G+V  DPF+L+ GDVVS +DL+ V++
Sbjct:   43 PKVLCPLVNTPMIDYTLELLASNGVQEVFVFCVNHAQQLSEYLSAGAWGDGMEVRCVTSTNCLSAGDALRELDQMGIVHGDPFVLIHGDVVSTVDLKAVLR 143          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A2V0PMJ8_9CHLO (Translation initiation factor eIF-2B subunit epsilon n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PMJ8_9CHLO)

HSP 1 Score: 124 bits (310), Expect = 6.130e-34
Identity = 61/108 (56.48%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQMEVRIIT--SNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            PKVL PLVN P+I+Y LE+LA N V+E+FVFC +HA Q++ YL  SKW  Q   RIIT  + NCLSAG+ALR +DQ+ +++ D F+LVSGD VSN+DL P +   R R
Sbjct:   36 PKVLLPLVNTPLIEYTLEWLALNKVEEIFVFCCAHADQIKKYLADSKWLRQRSPRIITVVARNCLSAGEALRALDQKDIIKGD-FVLVSGDTVSNVDLGPALAAHRAR 142          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A0D2LRH9_9CHLO (Putative translation initiation factor eIF-2B subunit epsilon n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LRH9_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 4.700e-33
Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQMEVRIIT--SNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            PKVL PLVN P+I+Y LE+LA N V+E++VFC +HA Q++ YL  SKW  Q   RIIT  S NCLS G+ALR +DQ+ +++ D FILVSGD V+N+DL P +   R R
Sbjct:   35 PKVLLPLVNAPLIEYTLEWLALNKVEEIYVFCCAHADQIKKYLADSKWLKQRSPRIITVVSRNCLSVGEALRALDQKDLIKGD-FILVSGDTVANVDLAPALAAHRAR 141          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A699Z023_HAELA (W2 domain-containing protein (Fragment) n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z023_HAELA)

HSP 1 Score: 122 bits (306), Expect = 7.070e-33
Identity = 60/108 (55.56%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQMEVRI--ITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            PKVL PLVNVPMI+Y LE+LA N V+EVFVFC +HA Q++ YL  SKW +  E+ +  + S +CLSAG+ALR I+QR +++SD F+L+SGD V+N++L PV+   R R
Sbjct:   38 PKVLLPLVNVPMIEYTLEWLAMNKVEEVFVFCCAHADQIKRYLSESKWAASREMVVTPVVSTSCLSAGEALRIIEQRDLIKSD-FVLISGDTVANLNLAPVLAAHRAR 144          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A6U1ISH3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1ISH3_9CHLO)

HSP 1 Score: 121 bits (304), Expect = 3.740e-32
Identity = 56/108 (51.85%), Postives = 83/108 (76.85%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQ--MEVRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            P VL PLVN P++DY LE+LA NDV+EVF+FC S+A ++++Y+ S+KW S    +V+++ S NC SAG+A+R IDQ+ +++ D FILVSGD +SN+ L+PVI+  + R
Sbjct:   94 PNVLLPLVNAPLLDYTLEWLASNDVEEVFLFCCSNADKVQEYINSTKWGSDPSFDVKVVVSTNCFSAGEAMRLIDQQDIIKDD-FILVSGDCISNMQLKPVIEAHKKR 200          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A7S0RA62_9CHLO (Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RA62_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 4.230e-32
Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPS--QMEVRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            PKVL PLVNVPMI+Y LE+LA N V+EVFVFC +HA Q++ YL  SKW    +M V  + S +CLSAG+ALR IDQ+ +++SD F+LVSGD VSN++L PV++  R R
Sbjct:   38 PKVLLPLVNVPMIEYTLEWLAMNKVEEVFVFCCAHADQIKRYLAESKWAHSREMTVTAVVSTSCLSAGEALRLIDQKDIIKSD-FVLVSGDTVSNMNLAPVLEAHRAR 144          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A2R6WUZ5_MARPO (eIF-2B GDP-GTP exchange factor subunit epsilon n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WUZ5_MARPO)

HSP 1 Score: 125 bits (315), Expect = 2.140e-31
Identity = 65/104 (62.50%), Postives = 78/104 (75.00%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQMEVRI--ITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKE 102
            PKVL PLVNVPMIDY LE+LA   V+EV VFC +HAKQ+  YL+ S+W SQ    +  I S +C+SAGDALR IDQR VVR D FIL+SGD VSN+ L+ V+KE
Sbjct:   42 PKVLLPLVNVPMIDYTLEWLASAGVEEVLVFCCAHAKQVTSYLEHSRWTSQSNFTVTPIESRDCVSAGDALRVIDQRNVVRGD-FILISGDTVSNMSLKEVLKE 144          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A6A7G7T2_9CRUS (eIF-2B GDP-GTP exchange factor subunit epsilon n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G7T2_9CRUS)

HSP 1 Score: 124 bits (312), Expect = 5.350e-31
Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQME--VRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            PKVL PLVNVP++DY LEFLA  +VKE+++ C SH+ Q+E+Y++ S W    E  V ++  +N    GDALR + Q  V+RSDPF+LVS DVV+N+DL+ VIK+ R+R
Sbjct:   40 PKVLMPLVNVPLLDYTLEFLAAGEVKEIYILCHSHSNQIEEYIRESSWSDDDECVVHVLKLDNVYGTGDALRAVHQADVIRSDPFVLVSADVVANVDLQDVIKQHRLR 147          
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Match: A0A7S0ICH0_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0ICH0_MICPS)

HSP 1 Score: 120 bits (300), Expect = 7.590e-31
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPSQ--MEVRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVIKEVRMR 106
            PK L PL NVPMI+Y LEFLA N V+EVF+FC +HA QL  Y+++S W S     V  I S NC+SAG+ALR ID + V+RSD FIL+SGD V+N+DLR  ++  R R
Sbjct:   53 PKTLLPLANVPMIEYTLEFLASNGVEEVFIFCCAHADQLTQYIENSAWSSTAGFVVHTIVSTNCISAGEALRLIDHKHVIRSD-FILISGDTVANMDLRRALEAHRER 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63795.13953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ37_ECTSI1.770e-5288.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX04_9STRA1.860e-3965.35eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A2V0PMJ8_9CHLO6.130e-3456.48Translation initiation factor eIF-2B subunit epsil... [more]
A0A0D2LRH9_9CHLO4.700e-3355.56Putative translation initiation factor eIF-2B subu... [more]
A0A699Z023_HAELA7.070e-3355.56W2 domain-containing protein (Fragment) n=2 Tax=Ha... [more]
A0A6U1ISH3_9CHLO3.740e-3251.85Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7S0RA62_9CHLO4.230e-3258.33Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Chlam... [more]
A0A2R6WUZ5_MARPO2.140e-3162.50eIF-2B GDP-GTP exchange factor subunit epsilon n=2... [more]
A0A6A7G7T2_9CRUS5.350e-3152.78eIF-2B GDP-GTP exchange factor subunit epsilon n=1... [more]
A0A7S0ICH0_MICPS7.590e-3156.48Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..106
e-value: 1.1E-19
score: 72.7
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..102
NoneNo IPR availablePANTHERPTHR45887FAMILY NOT NAMEDcoord: 1..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63795contigH-elongata_contig63795:2700..3450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63795.13953.1mRNA_H-elongata_contig63795.13953.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63795 2700..3450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63795.13953.1 ID=prot_H-elongata_contig63795.13953.1|Name=mRNA_H-elongata_contig63795.13953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
PKVLCPLVNVPMIDYALEFLARNDVKEVFVFCVSHAKQLEDYLQSSKWPS
QMEVRIITSNNCLSAGDALRDIDQRGVVRSDPFILVSGDVVSNIDLRPVI
KEVRMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans