mRNA_H-elongata_contig6379.13951.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6379.13951.1
Unique NamemRNA_H-elongata_contig6379.13951.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: D8LRP8_ECTSI (Rab GDP dissociation inhibitor n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP8_ECTSI)

HSP 1 Score: 751 bits (1939), Expect = 3.470e-262
Identity = 365/418 (87.32%), Postives = 388/418 (92.82%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPEVEEE 1254
            +VLHVDRNNYYGG+CASLNLTNLYNKFR GQ P   LGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVK G+INKVPATPDEALRTSLMGIFEKRRFR FL YLA YDE  P TF+GRDLR+MTM +LYE+FGLD+NTQSF GHAMALQRDD+YLH PALET+KS+QLYVRSLER+G SPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDD GVAWGIKAT+DGVPQVAKATMLIGDPSYFPSRMVKPTG VARSICI +HPFNGTN+AESTQIIIPGRQVNR +DIYVCMVSFSHCVAS GKYVAIASTTVET  P+AEL PAF+LLGPV+ERFD VS T  PVEDGTADRCFISESYDATSHFETTA DVQSLYERVTG+ +DL+IDPEVE+E
Sbjct:   58 KVLHVDRNNYYGGECASLNLTNLYNKFRPGQPPAPELGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKGGKINKVPATPDEALRTSLMGIFEKRRFRNFLQYLAGYDEQQPDTFKGRDLRRMTMLQLYEDFGLDENTQSFTGHAMALQRDDTYLHKPALETIKSIQLYVRSLERYGKSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDSGVAWGIKATMDGVPQVAKATMLIGDPSYFPSRMVKPTGMVARSICIMDHPFNGTNDAESTQIIIPGRQVNRHNDIYVCMVSFSHCVASPGKYVAIASTTVETSDPLAELAPAFELLGPVMERFDDVSNTLTPVEDGTADRCFISESYDATSHFETTAADVQSLYERVTGQKMDLSIDPEVEQE 475
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: A0A835ZGN9_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN9_9STRA)

HSP 1 Score: 593 bits (1528), Expect = 2.440e-200
Identity = 287/417 (68.82%), Postives = 339/417 (81.29%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPEVEE 1251
            +VLHVDRN++YGGDCASLNLTNLY KFR G  PP +LGHPTRDYNVDLIPKF+MA GNLVKMLL+TKVTRYLEFK VDGSYV K G+I KVPATPDEALR+SLMG+FEKRRFRKFL++++ Y+E  P+T++G DL+ ++M+++YE +GLD+NTQSFIGHAMALQRD++YL+ PAL+ VKS+QLY  SLER+G SPYIYPMYGLGGLPEGFSRLCA+HGGTFMLQCPVEE+LFD +G AWGIKATIDGVPQVAKA +++GDPSYFP   V+  G V RSICI +HP   T +AESTQIIIPGRQV R  DIYVCMVSFSH VA+AGKY+AIASTTVET  P++EL                      PV  G AD C++S SYDATSHFETT++D+  LYER+TG  L L I+ +  E
Sbjct:   51 KVLHVDRNSWYGGDCASLNLTNLYGKFRAGADPPPSLGHPTRDYNVDLIPKFIMACGNLVKMLLLTKVTRYLEFKNVDGSYVYKQGKILKVPATPDEALRSSLMGLFEKRRFRKFLIWISNYEEDKPATYEGLDLKVLSMRQVYEHYGLDENTQSFIGHAMALQRDETYLNLPALDAVKSIQLYCYSLERYGKSPYIYPMYGLGGLPEGFSRLCAVHGGTFMLQCPVEEILFDGEGKAWGIKATIDGVPQVAKAPIVVGDPSYFPKEKVRCYGRVVRSICILDHPIPNTADAESTQIIIPGRQVGRTEDIYVCMVSFSHNVAAAGKYIAIASTTVETADPISELXXXXXXXXXXXXXXXXXXXXXEPVGSGAADSCYVSASYDATSHFETTSQDILDLYERITGSKLSLEINADTTE 467
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: F0W0X7_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0X7_9STRA)

HSP 1 Score: 543 bits (1400), Expect = 2.910e-181
Identity = 261/414 (63.04%), Postives = 327/414 (78.99%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPE 1242
            +VLH+DRN+YYGGDCASLNL NLY K++ G  PPS LG  +RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYVVK+G+  KVPAT +EALR+SLMGIFEKR+FRK ++Y+  Y+E NP TF+G DL+K  M +++E+FG+D NTQSF+GHAMAL  DD YL  PA+ET+K+++LY  SLER+G SPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+E+L+DD G AWGIK       +VAK  +LIGDPSYF S  +  TG   RSI I +HP   TN+AES QIIIP  Q NRQ+DIYVCMVS++H +A+ G YVAI ST  ET  P++E+ P  +LLGP  +RFDSVS+ + P+ DG+ D C+IS SYD TSHFETT++DV S+Y+R+TG+ LD++I+ +
Sbjct:   48 KVLHLDRNSYYGGDCASLNLANLYEKYKPGTKPPSELGS-SRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKNGKSYKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDNPKTFEGLDLKKQPMSQVFEKFGVDANTQSFMGHAMALWTDDRYLEKPAIETIKAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDDTGRAWGIKCD----NEVAKGKLLIGDPSYFSSEKMTLTGKAVRSIFILDHPIPNTNDAESLQIIIPAAQANRQNDIYVCMVSYAHMIAAKGMYVAIVSTVAETADPLSEIAPGVNLLGPFFDRFDSVSDMYEPIHDGSTDNCYISASYDPTSHFETTSEDVLSMYKRITGEELDMSINAD 456
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: A0A8K1CTA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTA6_PYTOL)

HSP 1 Score: 539 bits (1388), Expect = 1.760e-179
Identity = 262/417 (62.83%), Postives = 328/417 (78.66%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPEVEE 1251
            +VLH+DRN YYGG+CASLNLTNLYNKF+  Q P S+LG   RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYVVK G+  KVPATP+EAL++SLMGIFEKR+FRK ++Y+  Y+E +P T +G DL    M +L+E+FG+D NTQSF+GHAMAL RDDSY+  PA+ETV++++LY  SLER+G SPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+E+L DD G AWG++A      +VAK  ++IGDPSYF S  ++P G   RSI I +HP   TNN+ES QIIIP  Q NR++DIYVC+VS +HCVA+ G YVAI ST VET+ P++EL+P   LLG  I+RFDSV++ + P+ DG+ D CFIS+SYD TSHFETT+ DV  LY+R+TG+ LD+ I+ +  E
Sbjct:   48 KVLHMDRNPYYGGECASLNLTNLYNKFKPDQEPRSDLGS-NRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKGGKTYKVPATPEEALKSSLMGIFEKRKFRKLILYIYNYEEEDPKTHEGMDLFTQPMSELFEKFGVDANTQSFMGHAMALMRDDSYISRPAIETVRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILKDDSGRAWGVRAG----NEVAKGKLIIGDPSYFSSDKLRPNGKAVRSIFILDHPVPNTNNSESLQIIIPAAQANRRNDIYVCVVSHAHCVAAEGMYVAIVSTVVETEDPLSELEPGVVLLGSYIDRFDSVTDMYEPIGDGSDDNCFISKSYDPTSHFETTSDDVLDLYKRITGEALDMNINADSTE 459
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: T0Q659_SAPDV (Rab GDP dissociation inhibitor n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q659_SAPDV)

HSP 1 Score: 537 bits (1383), Expect = 1.020e-178
Identity = 265/414 (64.01%), Postives = 317/414 (76.57%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPE 1242
            +VLH+DRN+YYGGDCASLNLTNLY KFRNG  P + LG   RDYN+DLIPKF+MA G LVKMLL TKVTRYL+FK VDGSYV K G+I KVPAT +EAL++SLMGIFEKRRFR  LMY+  Y+E +PSTF G DL+   M  LY +FG+D NTQSF GH MAL RDD YL  PA+E V+++++Y  SLER+G SPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+EVL +D G AWGI+       +VAK  ++IGDPSYFP+   + TG V RSI I  HP N T N+ES QIIIP  Q NR  DIYVC+VSF+HCVA+   Y+AI STTVET  P+AEL+    LLG  ++RFDSVS+   P+ DG AD CFIS SYDATSHFETT+ DV SLY+R+TG+ LD+ I+ +
Sbjct:   49 KVLHIDRNDYYGGDCASLNLTNLYGKFRNGAEPLTGLGS-NRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLDFKNVDGSYVYKGGKIYKVPATGEEALKSSLMGIFEKRRFRSMLMYIYNYEEDDPSTFDGLDLKTQPMSDLYAKFGVDANTQSFTGHTMALMRDDEYLRQPAIEAVRAIKMYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLHRSVDEVLIED-GKAWGIRCG----NEVAKGKIIIGDPSYFPAEKTRTTGQVVRSIFILRHPINNTANSESCQIIIPAAQANRHSDIYVCVVSFAHCVAAKDTYIAIVSTTVETSNPLAELELGISLLGEYVDRFDSVSDQLEPIGDGKADNCFISASYDATSHFETTSDDVLSLYKRITGEELDMNINAD 456
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: A0A024FZZ5_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ5_9STRA)

HSP 1 Score: 537 bits (1383), Expect = 1.670e-176
Identity = 258/414 (62.32%), Postives = 327/414 (78.99%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPE 1242
            +VLH+DRN+YYGGDCASLNL NLY K++ G  PPS LG  +RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYVVK+G+  KVPAT +EALR+SLMGIFEKR+FRK ++Y+  Y+E +P TF+G DL+K  M ++YE+FG+D NTQSF+GHAMAL  DD YL  PA+ET+++++LY  SLER+G SPY+YP+YGLGGLPEGFSRLCAIHGGTFML   V+E+L+D  G AWGIK       +VAK  +LIGDPSYF +  +  TG   RSI I +HP   TN+AES QIIIP  Q NRQ+DIYVCMVS++H +A+ G YVAI ST  ET  P++E+ P   LLGP ++RFDSVS+ + P++DG+ D C+IS SYD TSHFETT++DV S+Y+R+TG+ LD++I+ +
Sbjct:   48 KVLHLDRNSYYGGDCASLNLANLYEKYKPGTKPPSELGS-SRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVVKNGKSYKVPATGEEALRSSLMGIFEKRKFRKLILYIYNYEEDDPKTFEGLDLKKQPMSQVYEKFGVDANTQSFMGHAMALWTDDRYLGKPAIETIRAIKLYAYSLERYGKSPYLYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILYDATGRAWGIKCG----NEVAKGKLLIGDPSYFDNEKMTLTGKAVRSIFILDHPIPNTNDAESLQIIIPAAQANRQNDIYVCMVSYAHMIAAKGMYVAIVSTVAETADPLSEIAPGVSLLGPFLDRFDSVSDMYEPIQDGSNDNCYISASYDPTSHFETTSEDVLSMYKRITGEELDMSINAD 456
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: K3X8R5_GLOUD (Rab GDP dissociation inhibitor n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8R5_GLOUD)

HSP 1 Score: 530 bits (1365), Expect = 5.220e-176
Identity = 254/417 (60.91%), Postives = 324/417 (77.70%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPEVEE 1251
            +VLH+DRN YYGG+CASLNLTNLY KF+ GQ P  +LG   RDYN+DL+PKF+MA G LVKMLL TKVTRYLEFK VDGSYV K G+  KVPAT +EALR+SLMG+FEKR+FRK +MY+  Y+E +P T++G DL K  M +L+E+FG+D NTQSF+GHAMAL RD+SY+  PA+ETV++++LY  SLER+G SPYIYP+YGLGGLPEGFSRLCAI+GGTFML   V+E+LFD +G AWGI+A      +VAK  ++IGDPSYFP   ++  G   RSI I NHP   TN+AES QIIIP  Q  R +DIYVC+VS +HCV++ G Y+AI ST VET+ P+ EL P  +LLGP ++RFD++++ + P+ +G  D CFIS+SYD TSHFETT+ DV  LY+R+TG+ LD+ I+ +  E
Sbjct:   49 KVLHLDRNAYYGGECASLNLTNLYQKFKPGQPPRDDLG-ANRDYNIDLVPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVFKGGKTYKVPATGEEALRSSLMGMFEKRKFRKLIMYIYNYEEDDPKTYEGMDLFKQPMSELFEKFGVDANTQSFMGHAMALMRDESYISRPAIETVRAIKLYAYSLERYGKSPYIYPIYGLGGLPEGFSRLCAINGGTFMLNRGVDEILFDGEGKAWGIRAG----NEVAKGKLIIGDPSYFPQEKLRKDGKAVRSIFILNHPVPNTNDAESLQIIIPASQAQRHNDIYVCVVSSAHCVSAKGMYIAIVSTVVETEDPLLELAPGVNLLGPYLDRFDAITDMYEPIANGLQDNCFISKSYDPTSHFETTSDDVLDLYQRITGEALDMNINADSTE 460
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: A0A7S0SWM9_9STRA (Rab GDP dissociation inhibitor n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWM9_9STRA)

HSP 1 Score: 525 bits (1353), Expect = 4.310e-174
Identity = 261/412 (63.35%), Postives = 322/412 (78.16%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTF-QGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTI 1233
            +VLHVDRNNYYG D ASL+L NLY KFRN    P+ LGH  RD+NVDLIPKF+MA GNLVK+LL TKVTRYLEFK++DGSYV K G+I KVP+TP EAL +SLMG FEKR+FR FL+Y+  YD++ P+TF +G+ L ++ M++LY E+GLD NTQSFIGHAMAL RDD Y+  PA ETV+++QLY+ S+ER+G SPYIYP+YGLGGLPEGFSRLCAIHGGTFML   ++E+L++D   AW +K       ++AK  + IGDPSYF S   + TG V RSICI +HP   T+N ES QIIIP  QV R++DIYVCMVS +H VAS GKY+AI STTVET  P+ E++    LLG ++ERFDSV++ + PV DGT D C+IS+SYDATSHFET A DV SLYER+TG+ LD+TI
Sbjct:   56 RVLHVDRNNYYGADTASLSLNNLYQKFRNTSEYPNVLGH-ARDWNVDLIPKFIMACGNLVKILLHTKVTRYLEFKSIDGSYVYKDGKILKVPSTPAEALSSSLMGFFEKRKFRNFLLYVNDYDKTKPNTFFKGKPLDRVPMKELYNEYGLDANTQSFIGHAMALHRDDDYIDKPASETVEAIQLYIYSMERYGNSPYIYPLYGLGGLPEGFSRLCAIHGGTFMLNKGIDEILYNDNK-AWAVKTG----NEIAKGKVFIGDPSYFGSNKTRVTGKVIRSICILDHPIANTDNVESVQIIIPAVQVKRRNDIYVCMVSSAHNVASKGKYIAIVSTTVETTNPIKEIEVGLQLLGKILERFDSVTDLYEPVLDGTTDNCYISKSYDATSHFETMANDVLSLYERITGEKLDMTI 461
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: W4GVI1_9STRA (Rab GDP dissociation inhibitor n=6 Tax=Aphanomyces TaxID=100860 RepID=W4GVI1_9STRA)

HSP 1 Score: 522 bits (1344), Expect = 6.970e-173
Identity = 259/417 (62.11%), Postives = 315/417 (75.54%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPEVEE 1251
            +VLH+DRNNYYGGDCASLNL+NLY KFR   + P       RDYN+DLIPKF+MA G LVK+LL TKVTRYLEFK VDGSYV K   I KVPAT +EAL +SLMGIFEKRRFR  +M++  Y+E NP T QG DL K  M  +Y +FG+D NTQSF GHAMAL RDD+Y++ PA+ETV+++++Y  SLER+G SPYIYP+YGLGGLPEGFSRLCAIHGGTFML   V+EVLF D G AWGI++      +VAK  ++IGDPSYFP    +  G V RSI I  HP   TNN+ES QIIIP  Q NR++D+YVC+VSF+HCVA+   Y+AI STTVET  P+AEL+    LLG  ++RFD VS+   PV +GT D C+IS SYDATSHFETT+ DV SLY+R+TG+ LD+TI+ +  E
Sbjct:   48 KVLHLDRNNYYGGDCASLNLSNLYTKFRGEHAEPLTGLGSNRDYNIDLIPKFIMACGKLVKILLHTKVTRYLEFKNVDGSYVYKGSRIYKVPATGEEALSSSLMGIFEKRRFRGLIMFVYNYEEENPDTHQGLDLFKQPMSDVYAKFGVDANTQSFTGHAMALMRDDNYINRPAIETVRALKMYSYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEVLFKD-GKAWGIRSG----NEVAKGKLIIGDPSYFPKEKTRSVGKVVRSIFILRHPIANTNNSESCQIIIPAAQANRRNDVYVCVVSFAHCVAAKDTYIAIVSTTVETSSPLAELEIGVSLLGEYVDRFDEVSDQLEPVGNGTVDNCYISSSYDATSHFETTSDDVLSLYQRITGEQLDMTINADTTE 459
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BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Match: A0A2D4BVL6_PYTIN (Rab GDP dissociation inhibitor n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVL6_PYTIN)

HSP 1 Score: 525 bits (1351), Expect = 3.790e-172
Identity = 264/422 (62.56%), Postives = 321/422 (76.07%), Query Frame = 1 
Query:    1 QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIPKFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALRTSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLDDNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPMYGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQVAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIPGRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDLLGPVIERFDSVSETFAPVEDGTAD-----RCFISESYDATSHFETTAKDVQSLYERVTGKTLDLTIDPEVEE 1251
            +VLH+DRN YYGGDCASLNLTNLY KF+ G+ P S LG   RDYN+DLIPKF+MA G LVKMLL TKVTRYLEFK VDGSYV KSG+  KVPAT +EAL++SLMGIFEKR+FRK LMY+  Y+E +P T +G DL    M KLYE FG+D NTQSF+GHAMAL RD+SY+  PA+ETV++++LY  SLER+G SPYIYP+YGLGGLPEGFSRLCAIHGGTFML   V+E+LFDD G AWGI+A      +VAKA +LIGDPSYFPS  ++  G   RSI I +HP   TN++ES QIIIP  Q NR++DIYVC+VS +HCVA+ G YVAI ST  ET  P++EL     LLGP ++RFDS+S+ + PV+DG+ D     R     SYD TSHFETT+ DV  LY+R+TG+ LD+ I+ +  E
Sbjct:   48 KVLHLDRNPYYGGDCASLNLTNLYGKFKPGEEPSSALGS-NRDYNIDLIPKFIMACGKLVKMLLHTKVTRYLEFKNVDGSYVYKSGKTYKVPATGEEALKSSLMGIFEKRKFRKLLMYIYNYEEEDPKTHEGLDLFTQPMSKLYEYFGVDANTQSFMGHAMALMRDESYISRPAIETVRAIKLYAYSLERYGKSPYIYPIYGLGGLPEGFSRLCAIHGGTFMLNRGVDEILFDDSGRAWGIRAG----NEVAKAKLLIGDPSYFPSSKLRKGGKTVRSIFILDHPVPNTNDSESLQIIIPAAQANRENDIYVCVVSHAHCVAAKGMYVAIVSTMAETSDPLSELDVGVKLLGPYLDRFDSISDMYEPVDDGSRDNXGRRREAAGPSYDPTSHFETTSDDVLDLYKRITGEALDMNINADSTE 464
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6379.13951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP8_ECTSI3.470e-26287.32Rab GDP dissociation inhibitor n=2 Tax=Ectocarpus ... [more]
A0A835ZGN9_9STRA2.440e-20068.82Rab GDP dissociation inhibitor n=1 Tax=Tribonema m... [more]
F0W0X7_9STRA2.910e-18163.04Rab GDP dissociation inhibitor n=1 Tax=Albugo laib... [more]
A0A8K1CTA6_PYTOL1.760e-17962.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0Q659_SAPDV1.020e-17864.01Rab GDP dissociation inhibitor n=3 Tax=Saprolegnia... [more]
A0A024FZZ5_9STRA1.670e-17662.32Rab GDP dissociation inhibitor n=1 Tax=Albugo cand... [more]
K3X8R5_GLOUD5.220e-17660.91Rab GDP dissociation inhibitor n=2 Tax=Pythiaceae ... [more]
A0A7S0SWM9_9STRA4.310e-17463.35Rab GDP dissociation inhibitor n=1 Tax=Chromulina ... [more]
W4GVI1_9STRA6.970e-17362.11Rab GDP dissociation inhibitor n=6 Tax=Aphanomyces... [more]
A0A2D4BVL6_PYTIN3.790e-17262.56Rab GDP dissociation inhibitor n=1 Tax=Pythium ins... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6379contigH-elongata_contig6379:443..9532 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score752.3
Seed ortholog evalue1.2e-214
Seed eggNOG ortholog2880.D8LRP8
Preferred nameGDI2
KEGG koko:K03662,ko:K17255
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko05110,ko05120,ko05152,ko05161,ko05323,map00190,map01100,map04142,map04145,map05110,map05120,map05152,map05161,map05323
KEGG ModuleM00160
GOsGO:0000323,GO:0001505,GO:0001558,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005092,GO:0005093,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005794,GO:0005829,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006955,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007399,GO:0008021,GO:0008047,GO:0008104,GO:0008150,GO:0008361,GO:0009966,GO:0009987,GO:0010035,GO:0010038,GO:0010646,GO:0010720,GO:0010721,GO:0010769,GO:0010770,GO:0010771,GO:0010975,GO:0010976,GO:0010977,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017016,GO:0017137,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023061,GO:0030133,GO:0030141,GO:0030154,GO:0030234,GO:0030307,GO:0030424,GO:0030496,GO:0030516,GO:0030695,GO:0031267,GO:0031344,GO:0031345,GO:0031346,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032386,GO:0032387,GO:0032482,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033157,GO:0034613,GO:0034774,GO:0035556,GO:0035578,GO:0036230,GO:0036477,GO:0040008,GO:0042119,GO:0042221,GO:0042582,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043085,GO:0043087,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043547,GO:0044093,GO:0044297,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045773,GO:0045927,GO:0046903,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050769,GO:0050770,GO:0050771,GO:0050772,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051051,GO:0051056,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051336,GO:0051345,GO:0051592,GO:0051641,GO:0051649,GO:0051716,GO:0051960,GO:0051961,GO:0051962,GO:0060205,GO:0060284,GO:0060341,GO:0060589,GO:0061387,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090066,GO:0090087,GO:0090313,GO:0090315,GO:0090317,GO:0097458,GO:0097708,GO:0098772,GO:0098793,GO:0098916,GO:0099503,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120035,GO:1902531,GO:1903533,GO:1903827,GO:1903828,GO:1904950,GO:1905475,GO:1905476,GO:2000026
EggNOG free text desc.Rab GDP-dissociation inhibitor activity
EggNOG OGsCOG5044@1,KOG1439@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionrab GDP dissociation inhibitor protein
Ec32 orthologEc-12_000600.1
Exons11
Model size3061
Cds size1260
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6379.13951.1prot_H-elongata_contig6379.13951.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6379 443..7685 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931020.9441411-CDS-H-elongata_contig6379:442..6431622931020.9441411-CDS-H-elongata_contig6379:442..643Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 443..643 +
1691679665.3500202-CDS-H-elongata_contig6379:442..6431691679665.3500202-CDS-H-elongata_contig6379:442..643Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 443..643 +
1622931020.9634597-CDS-H-elongata_contig6379:1707..17761622931020.9634597-CDS-H-elongata_contig6379:1707..1776Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 1708..1776 +
1691679665.3747528-CDS-H-elongata_contig6379:1707..17761691679665.3747528-CDS-H-elongata_contig6379:1707..1776Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 1708..1776 +
1622931020.9782515-CDS-H-elongata_contig6379:2593..27171622931020.9782515-CDS-H-elongata_contig6379:2593..2717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 2594..2717 +
1691679665.3850896-CDS-H-elongata_contig6379:2593..27171691679665.3850896-CDS-H-elongata_contig6379:2593..2717Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 2594..2717 +
1622931020.992791-CDS-H-elongata_contig6379:3384..35051622931020.992791-CDS-H-elongata_contig6379:3384..3505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 3385..3505 +
1691679665.395534-CDS-H-elongata_contig6379:3384..35051691679665.395534-CDS-H-elongata_contig6379:3384..3505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 3385..3505 +
1622931021.010537-CDS-H-elongata_contig6379:4010..41821622931021.010537-CDS-H-elongata_contig6379:4010..4182Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 4011..4182 +
1691679665.4130208-CDS-H-elongata_contig6379:4010..41821691679665.4130208-CDS-H-elongata_contig6379:4010..4182Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 4011..4182 +
1622931021.0323894-CDS-H-elongata_contig6379:4383..44461622931021.0323894-CDS-H-elongata_contig6379:4383..4446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 4384..4446 +
1691679665.4258788-CDS-H-elongata_contig6379:4383..44461691679665.4258788-CDS-H-elongata_contig6379:4383..4446Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 4384..4446 +
1622931021.0494623-CDS-H-elongata_contig6379:4748..49071622931021.0494623-CDS-H-elongata_contig6379:4748..4907Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 4749..4907 +
1691679665.4364157-CDS-H-elongata_contig6379:4748..49071691679665.4364157-CDS-H-elongata_contig6379:4748..4907Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 4749..4907 +
1622931021.0694525-CDS-H-elongata_contig6379:5397..55581622931021.0694525-CDS-H-elongata_contig6379:5397..5558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 5398..5558 +
1691679665.4454875-CDS-H-elongata_contig6379:5397..55581691679665.4454875-CDS-H-elongata_contig6379:5397..5558Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 5398..5558 +
1622931021.0869493-CDS-H-elongata_contig6379:6256..63431622931021.0869493-CDS-H-elongata_contig6379:6256..6343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 6257..6343 +
1691679665.454699-CDS-H-elongata_contig6379:6256..63431691679665.454699-CDS-H-elongata_contig6379:6256..6343Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 6257..6343 +
1622931021.1036193-CDS-H-elongata_contig6379:7582..76851622931021.1036193-CDS-H-elongata_contig6379:7582..7685Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 7583..7685 +
1691679665.4648457-CDS-H-elongata_contig6379:7582..76851691679665.4648457-CDS-H-elongata_contig6379:7582..7685Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6379 7583..7685 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931021.1308298-UTR-H-elongata_contig6379:7685..91671622931021.1308298-UTR-H-elongata_contig6379:7685..9167Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6379 7686..9167 +
1691679665.4748428-UTR-H-elongata_contig6379:7685..91671691679665.4748428-UTR-H-elongata_contig6379:7685..9167Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6379 7686..9167 +
1622931021.1502004-UTR-H-elongata_contig6379:9213..95321622931021.1502004-UTR-H-elongata_contig6379:9213..9532Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6379 9214..9532 +
1691679665.484912-UTR-H-elongata_contig6379:9213..95321691679665.484912-UTR-H-elongata_contig6379:9213..9532Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6379 9214..9532 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6379.13951.1

>prot_H-elongata_contig6379.13951.1 ID=prot_H-elongata_contig6379.13951.1|Name=mRNA_H-elongata_contig6379.13951.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=420bp
QVLHVDRNNYYGGDCASLNLTNLYNKFRNGQSPPSNLGHPTRDYNVDLIP
KFLMANGNLVKMLLMTKVTRYLEFKTVDGSYVVKSGEINKVPATPDEALR
TSLMGIFEKRRFRKFLMYLAAYDESNPSTFQGRDLRKMTMQKLYEEFGLD
DNTQSFIGHAMALQRDDSYLHSPALETVKSVQLYVRSLERFGTSPYIYPM
YGLGGLPEGFSRLCAIHGGTFMLQCPVEEVLFDDQGVAWGIKATIDGVPQ
VAKATMLIGDPSYFPSRMVKPTGSVARSICITNHPFNGTNNAESTQIIIP
GRQVNRQHDIYVCMVSFSHCVASAGKYVAIASTTVETDKPMAELKPAFDL
LGPVIERFDSVSETFAPVEDGTADRCFISESYDATSHFETTAKDVQSLYE
RVTGKTLDLTIDPEVEEEG*
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mRNA from alignment at H-elongata_contig6379:443..9532+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6379.13951.1 ID=mRNA_H-elongata_contig6379.13951.1|Name=mRNA_H-elongata_contig6379.13951.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9090bp|location=Sequence derived from alignment at H-elongata_contig6379:443..9532+ (Himanthalia elongata Himel1 dioecious)
CAGGTGCTCCACGTCGACCGCAACAACTACTACGGCGGCGATTGTGCGTC
GCTGAACCTGACAAACCTTTACAACAAGTTCAGGAACGGGCAGTCCCCGC
CGTCGAACCTGGGACACCCCACCCGCGACTACAACGTGGACCTCATCCCC
AAGTTTCTCATGGCCAACGGTAACCTCGTGAAGATGTTGCTCATGACCAA
GGTTAGCCCGTCCCCCGAGCGCCAGCGGGGTGCTGGTTGTGGTTTGGAGA
CGCGAAATCTTATCTAGGCTTGATCCATTATAGCCCAAGCATCGAAAGTA
GAGTTTTACTTCGACCACTTTTAAGAAACGTCCCTGTTGGGCTGCCTCTT
TACCATGGAAACCTAGTGAGGATAGGAGGGTAAAAGGGGGAAGGACTGAG
AATATAACCTGAGCGACTTACCTTGGAGGCATTTTCGGTTGCAGTACGTG
CTTTCGCGTCGTGTGCGTACGATTTTTTTTTGCAGGGTTTGGGGCTATGA
TGTGACGTGTGAACTCTGGGGGCAGATTAAGGAGAGCCTTTAAAAAATAC
ACTGTTGTCGAGTGTGGTATATTGCCGCAGCAGCGAAAACCTCTAGGGCT
AGGGCTAGAAGGTGACGAGGAGAAGAATGGGTTTTGTTTCGCGGAAGTCT
CAAAGCTTCTACGACTGCTGTGCGTGGACGAGGTCGGTGGATATTATATT
GCGGTCGCCATAACTTTCTAGCGTCACTCTGGCGCCGCGATATGTGATGG
TCCTTTCGGCTGCAGGACTAGTTTCGATGTCAAATGCCAGACAAAAACGA
TGTTATCCCGTCACGACAAGGTTGATGTTAATGTTGGGGTGATTTCCTCC
ACGCGGATGCCTAAGGGGTGGAGGAAGGGACATCGTGTGCCCGAGAGCGA
GGACAAGGGCGATCAGAGGCGGGGTAACCGGTCTGGACAGGGCGAGTGGA
AAAGCTCCGAAGGAGGGACGAGAGGCGGGGACCGCCGTCGTGGAGTTGAT
TTCGGCGACCTAACGGTCCATGCTGATGCGTGACCTAACGTGGCATGCGG
CAGTCCCTTTTAGTAGTGTTGACTGACCTAACCTGGAGTAACGATTCACC
CGTGCCGAGAAGTTTCCCAAGTGCCGAGTGGACCACGACTGCGGCGAACC
GCCTTCGATGCTTTGATCCGCGCCATCATGTTGAATGCTTGCTTAATTCA
ATCGCCGGCAATATCGACTGCATTTGTCATGGAAAAATCCCTTTTTTCCT
CTATTTCCGTCATAGGTCACTCGGTACCTGGAGTTCAAGACAGTGGACGG
CAGTTACGTGGTGAAGAGTGGTGAGATCAACAAGGTGCGATGGAAATTGC
TGAACGTTTCTCCCCTTCCCCCTACCGTACTTTAGAATAATTAATCCTAA
TAACCCTTAGCCCCTATGGAACTTGATCTGTTTTGTACATACCTAAATTC
AACATAAAAAATGAAATCCCGTTCATAAAGGGTTAATAAGCCTTCAAGTC
GTATGTGTGGTATGTATCTTTTCAGACAGTATTAATTTAACAAAAGAGGA
ACACGAATACATTCGAACCCGACGAGAGCTGGTCCCCTGGACTATACCCC
TCACGGGGCTAAGGTTTGGATGGATGTTCGGAGGGTTGGAATGAGTTCAT
TTATTTTAAATTGTTTTTTTAAGGGAAAACACGATTTTGTACTTACATGT
AGTAAAAATGTCCACATTCGAACCTAATGATAGTTGGTCCCTTGAACTAA
AACTCTCATGGTGTGCTAAAAAGTCGTGGATGTTCGGGGAGGGTTCTAAT
GAGTTCATATGTTTTTTGTAATAATAAAAATGTTTTCTCGTTAACGATCA
CTCTCTCTAGACGCTCGGGTTTGGCGTATTATCCCCACATAATTTATCGA
TCACATGTTATTTTACCCTCCAAATTTTATATTGAATTTAGTGTGTAAAA
AAACAGATCGAGTTCCATAGGGGTTAAGTAGCCACTAATGTATATATACA
CTCGAACCTGACGATGGTTGATCTCCTAGACTTCACTCTTCTCGTGGTAT
AAATAAGTTATCGATATTCGAAGCTCTATAGTAGTGTGCTCCCAAGAGCG
AAGGCGGTTCGTTAATTTTTTTTTTTTTTTGGGAAACCCCAACGCCCCCA
GGTGCCGGCGACGCCTGATGAGGCCCTTCGGACATCCTTGATGGGCATCT
TCGAAAAGCGTCGCTTTCGCAAATTCCTCATGTATCTCGCCGCCTACGAC
GAGAGCAACCCGAGCACGTTCCAGGGTGGGTTTGGTTTGGTTTGGAAGAG
CACCGACCTCGAGCGATGGATCGATTCTCATCGTAGGGTTTATTTCGGCG
ACATCCCTTTTTTATTGTAACAAGTCGTGTGTAATAGTTGTTTTGTTGTT
GGTCTGTAGCACTTTTAGCAAAAATAACAACCGGATTTGGTTGCCTTCTG
CTCGTGGTCAGCTGAACAGGGAAAATGATTTTCCCCTGTCCCCGTTCGCG
CCTAAGAATTTGGTCTCGCGAGAGTGTTTCAGCACTCCCGTCCCGCGTGG
GTGTGGGAAAAGAGAGGCGCACAATAATTGGTCCATGGGGTTACCTGATT
AGGCTGCACCCGTTACTCAAACTTACCTTGAGGACTGCTGGCAGCGAACG
GGGATAACGAAAAAAACTCATGTGTACCTGACTATAAGGAGGAGCCAACC
AAATCCGGTTGATCCATGCTTTGTTAAATGTTATGACGTCATGACCATAC
ATTTTAAAAAAAGGAGGGGAATTAGATGACGGCCTTGATGTGTTTGAACA
GTGGGAAATGAGAGAGCGCTCCCCCGGCCTCCATGCGTGTAGTCTACTCG
TCCGTGTAGCCTGCGGTTACTCTCCGTATTTAACGGATACGTTTGAATGT
TATTATTGCGTTTGTCAAACGCGCGGTTGATCGAACGGACAGGACGTGAC
CTGAGGAAGATGACGATGCAAAAGCTGTACGAGGAGTTTGGACTCGACGA
CAACACCCAGTCCTTTATCGGACACGCGATGGCGCTGCAGAGGGACGACT
CGTACCTGCACAGGTGTAATGCCTAATTAGAACAACACGCCACGCTCCTT
TCTAAAAAAGATTACCGTATGCTCAAACGTTCCACGAGTACGACTTGTGA
GCCACGGTTTTGTTATAGATCATAACACGCTTATCGTCTGTCCCAAGACG
GGTTGCGGTCCTCGAGGGTGCAACGCGTTACGCCTTAGAACGTAAGCGAC
AAGATCCCGTCGCTGTGGTTCATCGTGACCCCTCCCCCGACCACGTTGAC
CTCAGCTTCTTTCAAGTGAAATTTAATATTTATAAAAAAAAACATGTGAG
CTCATTCCAACCCTCCGAACATCCACGTCTTATCGTAGGGCGAGGTACAC
TGACCTGGCTAATGTCTGTGATGAAATATGACCGAATCGAGGTGACGCTA
TGCCATAGATTATGCCTCCGCCCCTATTTATATGCAGTCCAACCGCAGTA
CCATCCCACTTAGACCGTTTCGTGACATGTTGCGATGCGGCTATGTTTTG
CCCCGGCCGGCTTCGCAGCCCCGCTTTGGAGACGGTGAAGAGCGTCCAAC
TTTACGTGCGATCGCTGGAGAGGTTTGGGACGTCTCCATACATCTACCCG
ATGTACGGCCTCGGAGGCCTACCCGAAGGGTTCTCGCGCCTGTGCGCCAT
CCACGGAGGGACGTTTATGCTGCAGTGTCCTGTTGAGGAGGTTTGATAAC
GTGTCGCATGCTTGGTGGTTTGTCGAGAGCCACATGTTCGTCACTGACAA
CGATAGCGAGACGGAATGGAAACCCCGGAGTAGCTGTATCACGTAGGGGT
AGTAGCTGTTAGGCGAAACGAGGCTGCTATCGATATTTTCTTTTTGGTGT
ACGGCATGACTTTTTTTCTTCCGGATATCCCTCATTGCCAGGTGCTCTTC
GATGACCAAGGCGTGGCGTGGGGAATCAAGGCCACGATCGATGGTGTGCC
CCAGGTTAGCACGTGATCAATTTAATCCGCCCGAGAGGTGCCGTGCACAT
CCTTAATTGATCTCTTTCTGCCGATCGCACTAGAGCTGTTCAGTGCGAGA
AGAGCGCCAGGTTGTAAAAATAAATAAATCTCGACTTGGCGAATGTTGTA
TAAGTGTTGGGCTTTGGTTGTGGGAGCGGCGCGAAAGCCTTAGTCTTGGG
AACGCCCTCCTGGAGTACATAACACTACGGACGTGTGTGTGTTCCAAGTA
CACCCCCCGCTTCGCCCACTTGCTCTATGCCGATCTTGATGCAATTTGTA
ACGCAGGTGGCTAAGGCGACCATGCTAATCGGAGACCCCAGCTACTTTCC
CAGCCGCATGGTGAAGCCCACGGGCTCGGTGGCGCGGAGCATCTGCATAA
CGAATCACCCCTTCAATGGCACCAACAATGCGGAGTCGACGCAGATTATC
ATCCCGGGGAGGCAGGTGCACGCCCCAGCAGCCAGACGCAGACAGTCTTA
GTAAAACATTTGTCCCTATTTACCCCCCCCCCCCCCCCCCCCCCCCCTCC
CCCTTTTTTCCGTTCCTCCTTCCTAACACTCCCCTCCTCTGCGATCCNNN
NNNNNNNCCCCCCCCCACACCCACCCAGTCTTAGTAAACCCTTTGTCCCT
ATTTCCCCCCCCCCCCCCTCCCCTTCCCCGTTACCTTCTTGTGGGATTCT
CCTGTCATAAAACTCTCCGCGTTGACGACCCCTAAAATATATAGCTTCGA
TAGTGTTCCTTGTTTGATTGTTTCTCGAATTATTTGATTGGAGATATTAT
CTATTATAGGAGGCTACTCTCTTGCCAGACAAAATACGAAGGCACTGGGC
ACTGCGGAGCAACGTGTTCGAGTGTGTGATCCACCACCGTCGCCACTTTC
TCACGATATCCTATTTTTCTTTGTTCGGGCGGCGTAAAAACGCCTCTTTT
AAAAGGTGAACCGCCAGCACGACATCTACGTATGCATGGTGTCGTTCTCT
CACTGCGTGGCGAGCGCCGGCAAGTACGTGGCAATCGCCTCTACGACCGT
CGAAACCGACAAACCTATGGCTGAGCTTAAGCCGGCTTTCGACCTGCTTG
GACCGGTGATTGAGAGGTAAGACGTTCAGCGCCCGCACGAACATACACAC
ACATGTACAATCCCGACTGGGAGGATCAATTCGAGAGTAGCCTAGAAAGG
CTGGCATGAAAGAGACGGATTGTGTGGTTCTGTGCAATTCCATAAATACG
CACATACACGCAATGCTTTACACTCTCTCGAAGGGTTTTGGAAATAATTG
TCAAATGACTGCACCTTTCATGGCGCCAAGAAGGCTTAAATGTTCGGAGG
GTTTTTAATAAGTTCATATCTTTAAAAAATAAACATAATACGTACCAGAT
TTTTTTAAATTTTTTTCTCCGTTCTTGCAAAACTAATCCGTCTTTTGAAT
ATTTTCGCACTAGAGAAAAAAAAAAAATCACGCAGAATATTGTGAAAGAA
GCTTTTTCGTTTTTGTTTTCTGCACCACCTGGTGCATGAATATGACCCCT
AGCCGTCCGTACCTTCCTTGCTCAAATTTTGAACACCGACGATGTCACTT
GTTCCTCTTCGACGATCCCTTGAGCGGCGCACACTTACCCAGCGCGTTCT
TCGTCGCTATGATCCTGCATGCGCGTCCGCTGGGATAGATAAATCGTTTT
AGCCTCGCTGGAACGAACGATTGTGTCAGATTCGCATTTTTACTTCTGTA
TATATATATTTTTTCTGTTTCTCGTGTCTTCCACATCCCATCACGTCACT
GATTGAATTGACAGGTTCGACTCGGTGTCGGAAACCTTCGCCCCCGTCGA
GGACGGAACCGCGGACCGTTGTTTCATCAGCGAATCGTACGACGCCACCA
GGTACGGTTGTCTTTATTTTTTAAAGTGAGGGTGTGGGGTGTCGGATCAG
CTCGAAGGGTAAAATATCAGCGGTGCGCACGTGTGGAAGGGTCGGAAGGT
TTTCCCTCTTGTGTAGAACGTATTAACGTTTCTAAAGATCAAAATTAAAA
AAATAAAGGAAAATGCTCAACCGGTGCTGCAGGGCGCTGCTAACGCCACT
AATATGTAAAACCATTGTTAGTGTCGGAAAAATCAGGTTGGAAATTCAAG
TCACACCGAAGACGCAGTAGTAGCAGTAGTTGTTGTACTAGTGTCTGTCT
CCCTCCCTCGCCTATCATAGTGACTGCAAGGTTGTCTAGTGCTGTTGATG
GTGGTGGTGACTGCGGGGCTGTTGTTTTTTTACATTTTGTCGGTGTGCAA
CAAATCGAGTCCGTCGTCCCCCCCTCCAAAAAAATAAATAAAAATTGGAC
GTGCCAGAACCTGACGTACACGAGAGAGAAGAACTTTTCCATGGGGATGG
AATGGGGGGGCAATCACGTCTATAAATATATCACAAAAATTCCGTCAGCT
AAGGACGCGACGGAAAAATTCTCGAGACCAAGTTGTTGCTAGTTGCGGAG
TCTATCTACGTGCTGGTGTTGTTTTTTATTCATTATAATAGTAAGTGATA
ATGTTGCGTTGTCTAGACGGCAGCAACGAGGGGTGCAGTACACGGAACCA
TCTATCGTCAGTTTCGAATGTGTACTCACCGCTCCTTGCTCCATCCCCGA
CTACTATCTGTTAGAGGTGCTGGTTCCTCGTCGCGGGCGAACCGTTGGCG
TGGTACAGAAATTGTGGAGTCTGTCTACGTACTGCTATTGTGCTGATGCC
CTTCGTTTGCATCATTAATTTGGAGCAGATTCATTCGGAAAGCCTTTGAT
CAACCAAACACCCTTTCTTTGATTTTCCATAAAATCTAAAAGAAGTCCCT
GCGGACTTCTTTGGATGACAGATATTTGCAAAAAATCAAAATGTGCCGTC
GGTAAGTTGTAGAACTTCGACCAATCAGAGCACGATTTTGATTTTGATTT
TTTCCAATTTTGATTTTTTCCAATTTTGATTTTTATGAAACTCGTTAATA
GCCGCCCTTAGATAAGGTTGTTTCTGCACATTCCTGTTTGCTAGATTTTC
TCGCTCATGTCTCCTCGCGCTTGACCGCTGACCCCGTGTTCTTCTCTCCC
CCGTCTCCCGCCATCCCCCCAAAACGGCTGAGATGCGTAGCCACTTCGAG
ACGACCGCGAAGGACGTGCAGAGCCTCTACGAGCGGGTGACCGGGAAAAC
GCTGGACCTCACCATCGACCCCGAAGTGGAGGAAGAAGGCTAAATCATTT
CTTCGGAGACACGAGGCAGCTGAATAGATATCAAGCGGGACTGTTTATTC
GCTCTCCCCTAGGGAAAAGTGTTCGCCGAAGATCGGTCGATATTGGGGCG
AGGAGTCTTGGTACCATACACACCTTGTAGGAGAGAGGACTTGAGACAGG
TTTTCAGGGGTGTGGGGAGGGGTTAATTAAGGGAGATAGATGAAAGAAGG
TTGGCAGTATTTTGATGAATCTGCTTGGTGCAGCCGTGGTTCGTCGCTGG
ATGGTGGTGAGTCTTACGTTGCAGTTTTATCGATTTATCGACATGGCTCT
GGTCCCGTGAGCTCGAAGGCCGTGTGCGAACCATTATCTTCTGCGTCCCC
GACGCCAACAAGACATGGAGGGGAGAAAAACGCGAGGCCGGACGCGAAGG
GTTCATACGCTTCAATGAAAACAGAAATCAAAACATTCGAACCTGACGAT
AGTTGGTCCCCTGGAGTGCACCTCTCACGGTGCGAAGGTGTGGATGTTCG
AAGGGTTGGGATGAGTTCATCTGTTTTTTATTAAGAATAATTTTTGTCCC
TTCACCCCCCGCACGAAAAAAATATCTACCTTAACCCGTAGTAATCGCTT
CAAGTATACCGCGTGCTGCGCGCGAGAAACCCGCGTTAAGTATACCGCGT
TACCGTGCCTGGGATATAGTTAAAGTTCCATATCAACGCGTTACCGTGCC
AGAAAACTACTTAGGGATCAATTCGCGTGTCTTTTTTGCAGGAGGGGGGG
GGGGCTTGAGGAGGGTTGTTGGCGGGAAGGGAAGTAATCCGGTTGAGGAT
GGGGTTATAGGCGGGATCCATTAGCGGGTGTGTAGCTTCTAAATTAAGAA
CCAGCTCATTATTCCAAGGGGAGTAAAATAGCATCCAAAACGTTTTAGCA
CCTTGGGATGAGTCCCATGAGAAGAGGCCTATTTCACTCGAGGCCCCGAT
CCGATCCGCCATTTGATAGTTTTGCTTTTTTGAACGGGTGCGGACGCAGG
GCGAGTTATCTTAAGCGAGGATCTTTATATCTAATGTGACAAGGCAGATT
TCTGCTCCTTCCCTCGCGAGATTAAGTAAAACAGATGGTGTCATTACTCG
AATGCCTCCGCGTATTCCGGCTAAAATTCGCTCGAACACGGACTTCCGTT
AAACTTTTGTCACTCGATTAATAGTGAGAGGGTTTTTAGTTTTTTTTCTT
CGTGTTGGAATTAAATGTGATTGGATATAAAGATATTGCGCATGCGGCTT
TTTTTCTCCTCAAGTCACTTGCTCTCACAGCTCTGACACAACGTTCCCTG
GTACAATCGGCAATCAAAGCTTCGAAAGGTCCCGTGAAATATTCCCCCCC
TGACCCCAACCCTGACTCGTGTGGAAGGATAAGCTTTGAGCCTCTCGCCC
GTACTCGTTGGTTGGTTGAGACCGCCCTAGCCCCAACGTCTCTACCGATA
AATGATGCAATAATGCGATCGAAATTCCGGATACAGAAACGTCATGTCGA
TCGTTTCGAAAAAAATCACAACGGCAGCGGGCCTCGACATCTTCCAAGAA
CACAGGGTTTCTCGGGGTGAAGCACATTTATTTCCCGATTTTGGGGCTCA
CGGAGTAACCCCAACCCTCTATATTTTGGATCCGTTCCTTTTCTCTCTTT
TTCGATGTAATTCTATTTATAAAAGACTTTCAATATTGTAGAGTTAAAAC
AACTTTATGCGAAAGGAAAATCTATCTAGCGTCAGCACACGCCGCTCGAC
ACAAATCCTTGATGCGGGCGAAGTACTTGAACGCTGTTGACTCTGTATCT
CTATACCCAAGACTACACCCCCACCCCCACAGGAGTACAC
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Coding sequence (CDS) from alignment at H-elongata_contig6379:443..9532+

>mRNA_H-elongata_contig6379.13951.1 ID=mRNA_H-elongata_contig6379.13951.1|Name=mRNA_H-elongata_contig6379.13951.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2520bp|location=Sequence derived from alignment at H-elongata_contig6379:443..9532+ (Himanthalia elongata Himel1 dioecious)
CAGGTGCTCCACGTCGACCGCAACAACTACTACGGCGGCGATTGTGCGTC
GCTGAACCTGACAAACCTTTACAACAAGTTCAGGAACGGGCAGTCCCCGC
CGTCGAACCTGGGACACCCCACCCGCGACTACAACGTGGACCTCATCCCC
AAGTTTCTCATGGCCAACGGTAACCTCGTGAAGATGTTGCTCATGACCAA
GCAGGTGCTCCACGTCGACCGCAACAACTACTACGGCGGCGATTGTGCGT
CGCTGAACCTGACAAACCTTTACAACAAGTTCAGGAACGGGCAGTCCCCG
CCGTCGAACCTGGGACACCCCACCCGCGACTACAACGTGGACCTCATCCC
CAAGTTTCTCATGGCCAACGGTAACCTCGTGAAGATGTTGCTCATGACCA
AGGTCACTCGGTACCTGGAGTTCAAGACAGTGGACGGCAGTTACGTGGTG
AAGAGTGGTGAGATCAACAAGGTCACTCGGTACCTGGAGTTCAAGACAGT
GGACGGCAGTTACGTGGTGAAGAGTGGTGAGATCAACAAGGTGCCGGCGA
CGCCTGATGAGGCCCTTCGGACATCCTTGATGGGCATCTTCGAAAAGCGT
CGCTTTCGCAAATTCCTCATGTATCTCGCCGCCTACGACGAGAGCAACCC
GAGCACGTTCCAGGGTGCCGGCGACGCCTGATGAGGCCCTTCGGACATCC
TTGATGGGCATCTTCGAAAAGCGTCGCTTTCGCAAATTCCTCATGTATCT
CGCCGCCTACGACGAGAGCAACCCGAGCACGTTCCAGGGACGTGACCTGA
GGAAGATGACGATGCAAAAGCTGTACGAGGAGTTTGGACTCGACGACAAC
ACCCAGTCCTTTATCGGACACGCGATGGCGCTGCAGAGGGACGACTCGTA
CCTGCACAGGACGTGACCTGAGGAAGATGACGATGCAAAAGCTGTACGAG
GAGTTTGGACTCGACGACAACACCCAGTCCTTTATCGGACACGCGATGGC
GCTGCAGAGGGACGACTCGTACCTGCACAGCCCCGCTTTGGAGACGGTGA
AGAGCGTCCAACTTTACGTGCGATCGCTGGAGAGGTTTGGGACGTCTCCA
TACATCTACCCGATGTACGGCCTCGGAGGCCTACCCGAAGGGTTCTCGCG
CCTGTGCGCCATCCACGGAGGGACGTTTATGCTGCAGTGTCCTGTTGAGG
AGCCCCGCTTTGGAGACGGTGAAGAGCGTCCAACTTTACGTGCGATCGCT
GGAGAGGTTTGGGACGTCTCCATACATCTACCCGATGTACGGCCTCGGAG
GCCTACCCGAAGGGTTCTCGCGCCTGTGCGCCATCCACGGAGGGACGTTT
ATGCTGCAGTGTCCTGTTGAGGAGGTGCTCTTCGATGACCAAGGCGTGGC
GTGGGGAATCAAGGCCACGATCGATGGTGTGCCCCAGGTGCTCTTCGATG
ACCAAGGCGTGGCGTGGGGAATCAAGGCCACGATCGATGGTGTGCCCCAG
GTGGCTAAGGCGACCATGCTAATCGGAGACCCCAGCTACTTTCCCAGCCG
CATGGTGAAGCCCACGGGCTCGGTGGCGCGGAGCATCTGCATAACGAATC
ACCCCTTCAATGGCACCAACAATGCGGAGTCGACGCAGATTATCATCCCG
GGGAGGCAGGTGGCTAAGGCGACCATGCTAATCGGAGACCCCAGCTACTT
TCCCAGCCGCATGGTGAAGCCCACGGGCTCGGTGGCGCGGAGCATCTGCA
TAACGAATCACCCCTTCAATGGCACCAACAATGCGGAGTCGACGCAGATT
ATCATCCCGGGGAGGCAGGTGAACCGCCAGCACGACATCTACGTATGCAT
GGTGTCGTTCTCTCACTGCGTGGCGAGCGCCGGCAAGTACGTGGCAATCG
CCTCTACGACCGTCGAAACCGACAAACCTATGGCTGAGCTTAAGCCGGCT
TTCGACCTGCTTGGACCGGTGATTGAGAGGTGAACCGCCAGCACGACATC
TACGTATGCATGGTGTCGTTCTCTCACTGCGTGGCGAGCGCCGGCAAGTA
CGTGGCAATCGCCTCTACGACCGTCGAAACCGACAAACCTATGGCTGAGC
TTAAGCCGGCTTTCGACCTGCTTGGACCGGTGATTGAGAGGTTCGACTCG
GTGTCGGAAACCTTCGCCCCCGTCGAGGACGGAACCGCGGACCGTTGTTT
CATCAGCGAATCGTACGACGCCACCAGGTTCGACTCGGTGTCGGAAACCT
TCGCCCCCGTCGAGGACGGAACCGCGGACCGTTGTTTCATCAGCGAATCG
TACGACGCCACCAGCCACTTCGAGACGACCGCGAAGGACGTGCAGAGCCT
CTACGAGCGGGTGACCGGGAAAACGCTGGACCTCACCATCGACCCCGAAG
TGGAGGAAGAAGGCTAACCACTTCGAGACGACCGCGAAGGACGTGCAGAG
CCTCTACGAGCGGGTGACCGGGAAAACGCTGGACCTCACCATCGACCCCG
AAGTGGAGGAAGAAGGCTAA
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