prot_H-elongata_contig6371.13941.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5KW89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW89_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.000e-26 Identity = 53/126 (42.06%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+Y L+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L EFP D+G+ +WY GCA + G K++Q A++DS++ RF
Sbjct: 1 MSGKVVKVERALYRLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELF-ASLNKEFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIDSMLQRF 124
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5JE75_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE75_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.430e-26 Identity = 52/126 (41.27%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L +FP D+G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 1 MSGKVVKVERALYGLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELF-ASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 124
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.590e-25 Identity = 52/126 (41.27%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L +FP D+G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 350 MSGKVVKVERALYGLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIVAADEGEREELF-ASLNKKFPVKDVGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 473
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5JXU1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU1_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.310e-25 Identity = 51/126 (40.48%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V + ++F A L +FP D+G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 70 MSGKVVKIERALYGLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGDREELF-ASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYIESMLKRF 193
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5JFS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFS2_9PHAE) HSP 1 Score: 109 bits (272), Expect = 2.920e-25 Identity = 52/126 (41.27%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ +GR+W + + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V ++F A L +FP D+G+ +WY GCAF G K++Q A+++S++ RF
Sbjct: 243 MSGKVVKVERALYGLKQSGREWGVEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGAREELF-ASLNKKFPVKDLGECTWYDGCAFAMGVENGITKLSQTAYIESMLKRF 366
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5JNU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU5_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.090e-25 Identity = 52/126 (41.27%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L +FP D+G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 395 MSGKVVKVERALYGLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELF-ASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 518
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5K738_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K738_9PHAE) HSP 1 Score: 103 bits (258), Expect = 3.190e-25 Identity = 49/126 (38.89%), Postives = 80/126 (63.49%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YG + +GR+W + L++ G EQ + DPCV+RKVVD EV + ++VDD+ V E ++ +A L +FP D+G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 70 MSGKVVKVERALYGPKQSGREWGFEAADALVEN-GYEQCRVDPCVFRKVVDREVVGLIVIYVDDIFVAADEGER-EVLFASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 193
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE) HSP 1 Score: 108 bits (271), Expect = 4.240e-25 Identity = 52/126 (41.27%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L +FP D+G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 637 MSGKVVKVERALYGLKQGGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELF-ASLNKKFPVKDLGECTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 760
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5L4A4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A4_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.280e-25 Identity = 51/126 (40.48%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+YGL+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L +FP +G+ +WY GCA + G K++Q A+++S++ RF
Sbjct: 119 MSGKVVKVERALYGLKQSGREWGFEAAGALIEN-GYEQCRVDPCVFRKVVDGEVVSLIVIYVDDILVVADEGEREELF-ASLNKKFPVESLGEYTWYDGCAIAMDVENGITKLSQTAYIESMLKRF 242
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE) HSP 1 Score: 106 bits (264), Expect = 7.820e-25 Identity = 52/126 (41.27%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 1 MSGEVVLLQSAVYGLRHAGRQWNLRLSRVLLQKTGMEQSKSDPCVYRKVVDGEVTLIPCVHVDDLDVTTKAKETFDIFYAKLKGEFPANDIGDLSWYLGCAFERNKMEGAVKMTQIAFVDSLVHRF 126
MSG+VV ++ A+Y L+ +GR+W + L++ G EQ + DPCV+RKVVDGEV + ++VDD+ V E ++F A L +FP D+G+ +WY GCA + G K++Q A+V+S++ RF
Sbjct: 1 MSGKVVKVERALYRLKQSGREWGFEAADALIEN-GYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELF-ASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRF 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6371.13941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6371.13941.1 ID=prot_H-elongata_contig6371.13941.1|Name=mRNA_H-elongata_contig6371.13941.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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