mRNA_H-elongata_contig63633.13938.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: A0A7S2XRC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRC2_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.460e-26 Identity = 65/149 (43.62%), Postives = 89/149 (59.73%), Query Frame = 1
Query: 22 FRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDEL---MGEGDPPSPSPDLFDAAFHDSRFLFPSMHLCPLTDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
+ L RD+PV VADI+N YR VVT+GCCGA EF+KL +YTL + V+HLD+DTLVL P+D+L M P S S F ++ + L +DA +T D M+ K + VQGGFL++RP L VYE+ + I+R+
Sbjct: 134 YELLVRDLPVPVADIQNAEYREKVVTNGCCGASEFVKLHAYTLVQHDIVVHLDLDTLVLKPLDDLFDAMLHHSPSSSSSSSLTTEFAVTKDIEFGKPLPANHRIDA--FFTRDYNMASKRMKHVGVQGGFLVLRPSLSVYEEFQTIIRE 280
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: W7U427_9STRA (Glycosyl transferase, family 8 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U427_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.840e-26 Identity = 59/145 (40.69%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 22 FRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELMGEGDPPSPSPDLFDAAFHDSRFLFPSMHLCPLTDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVR 456
+++ ERDIPV + DI+ F R H+ SGCCGA E LKL ++TLTDYHRV+HLD+D+++L PMDEL FD D + +YT D M+ + VQGGFLL+RP++ +E+L D V+
Sbjct: 29 WKVIERDIPVDITDIQGTFLREHIAKSGCCGATELLKLYAWTLTDYHRVVHLDMDSMLLQPMDEL-------------FDKE-------------------DKTFMYTCDYGMTNERLKACMVQGGFLLLRPNVTEFERLVDTVK 141
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: D7FZ22_ECTSI (Putative zinc-protease albF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ22_ECTSI) HSP 1 Score: 107 bits (268), Expect = 1.480e-25 Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 1
Query: 22 FRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELM 219
+R+ E+D+PVAV DIEN+ YR HVV SGCCGA+EF+KL +YTLT YHRV+H+D DTL+LHPMDELM
Sbjct: 135 WRVVEKDLPVAVEDIENETYRKHVVKSGCCGANEFIKLHAYTLTQYHRVMHVDADTLMLHPMDELM 200
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: B7G706_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G706_PHATC) HSP 1 Score: 110 bits (274), Expect = 2.040e-25 Identity = 65/150 (43.33%), Postives = 83/150 (55.33%), Query Frame = 1
Query: 16 LYFRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELMG--EGDPPSPSPDLFDAAFHDSRFLFPSMHLCPLTDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
L + L RD PVAV +I DF R + +GCCG E LKL++YTLT + V+ LD+D L+L P+D L P P DL +P L D LLYT D AM G+ V P QGG L++RPD VYE+LR+IVR+
Sbjct: 158 LNYTLLRRDTPVAVHEIRGDFLREKITANGCCGEKELLKLEAYTLTSHEIVVLLDLDVLLLQPLDRLFDFLTYGTPLPRDDL----------QWPDRPLATTAYRDIGLLYTVDYAMVNPGRAVKPFQGGVLVLRPDRNVYEELRNIVRE 297
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: A0A7S2SCU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCU9_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.170e-24 Identity = 55/156 (35.26%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 16 LYFRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELMGEGDPPSPSPDLFDAAFHDS--RFLFPSMHLCP------LTDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
L +++ DIP++V +IE +F R H+ T+GCCG E +KLQ+YTLT + V+HLD+DT+VL P+D DLFD ++ + + P+ H+ P + VD ++T D M+ + + VQGGF ++RP L + E+++ ++R+
Sbjct: 1 LNYKVHVVDIPISVDEIEGEFLRTHIATNGCCGEKELIKLQAYTLTQHSIVVHLDLDTIVLKPLD-------------DLFDTMLQNTIAKKVIPAHHIMPKYLERNINSVD--FIFTRDYNMAQNLKKSVGVQGGFFVLRPSLPILEEMKVLLRK 141
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: D8LCJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ8_ECTSI) HSP 1 Score: 104 bits (259), Expect = 1.060e-23 Identity = 58/148 (39.19%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 16 LYFRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELMGEGDPPSPSPDLFDAAFHDSRFLFPSMHLCPLTDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
L FR+ +P+++ +IE+ R + GCCG E +KL +YTLT+YHRV+HLD DT+VL P+D L+ D + SLLYT D M VMPVQGGFL+VRPD EV++ L IV++
Sbjct: 118 LGFRVMRPGLPLSLDEIEDPVTRGRIAKGGCCGLAELMKLFAYTLTEYHRVVHLDTDTIVLQPLDALL---------------------------------DAEESLLYTADINMGSSYTPVMPVQGGFLVVRPDPEVFQDLVQIVKR 232
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: A0A7S4MEJ2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEJ2_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.480e-23 Identity = 60/144 (41.67%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 37 RDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELMGEGDPPSPSPDLFDAAFHDSRFLFPSMHLCPL---TDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
RD+PV V DI D+ R VV +GCCG EF+KL++YTL D+ V+HLD+DTL L PMDEL L D P+ PL T +DA +T D M G+ + VQGGFL++RP + YE+ + I+R+
Sbjct: 76 RDVPVRVEDIRGDYLRTKVVDNGCCGEKEFVKLEAYTLVDHPIVVHLDLDTLALRPMDELFDAM--------LLSPGSSDFAAAVPTHADAPLPKGTPIDA--YFTRDYNMVRPGRKHVGVQGGFLVLRPSMSAYEEFKSIIRE 209
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: A0A7S3NFL9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFL9_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.360e-23 Identity = 55/147 (37.41%), Postives = 85/147 (57.82%), Query Frame = 1
Query: 22 FRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDELMGEGDPPSPSPDLFDAAFHDSRFLFPSMHLCPLTDVDASLLYTTDPAMSLKGQ-TVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
+R+ ERD+P+ +ADI+ ++ RN + +GCCGA E LKL ++TLT+YHRV+H+D+D L+L P+DEL + D + P + +YT D M+ T P QGGF++ +PD+EV+ L D+VR+
Sbjct: 130 YRVLERDLPLRIADIQGEYLRNRIEKNGCCGAWELLKLYAWTLTEYHRVVHVDMDVLILQPLDEL-----------------YDDLKIWGPQVRA----------VYTYDWTMARPPWGTNPPTQGGFIIAKPDIEVFNSLVDVVRK 249
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: A0A7S4T1G8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T1G8_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.440e-23 Identity = 66/156 (42.31%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 16 LYFRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDEL---MGEGDPPSPSPDLFDAAF-HDSRFLFPSMHLCPLTDVDASL------LYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIV 453
L F++ RD P+ V +I+ F R HVV SGCCG E++KL SYTLTD+ V+HLD+D L+L P D+L M +G P SP+ + F HD T V+ SL +T D M G+ + VQGGFL+VRP L+V+E+ R I+
Sbjct: 161 LGFQILVRDTPINVTEIKGKFLREHVVKSGCCGEKEYIKLYSYTLTDHPIVVHLDLDCLILKPFDDLFDAMLDG-PESPARERIKLMFPHD-------------TSVEKSLPSHINAYFTRDYNMVNPGKKHVGVQGGFLVVRPSLDVFEEYRSII 302
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Match: A0A7S2Q4C4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q4C4_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.070e-23 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 16 LYFRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLTDYHRVLHLDIDTLVLHPMDEL---MGEGDPPSPSPDL------FDAAFHDSRFLFPSMHLCPLTDVDASLLYTTDPAMSLKGQTVMPVQGGFLLVRPDLEVYEKLRDIVRQ 459
L +++ RD+PV + +IE D+ RN V +GCCG EF+KL +YTL ++ V+HLD+DTLVL PMD L M +G P + D AF+D P P+ + +T D M+ G VQGGFL++RP +EVYE+ R+I+R+
Sbjct: 156 LGYQILVRDVPVPLQEIEGDYLRNKVPKNGCCGDKEFVKLHAYTLMEHPVVVHLDLDTLVLKPMDALYDVMMDGVTPHTTTKKNKNNGGIDVAFND-----PMQQQQPI-----NAFFTRDYNMAHPGMKHAGVQGGFLVLRPSMEVYEEFREIIRK 302 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63633.13938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63633.13938.1 >prot_H-elongata_contig63633.13938.1 ID=prot_H-elongata_contig63633.13938.1|Name=mRNA_H-elongata_contig63633.13938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp MRAWLLYFRLSERDIPVAVADIENDFYRNHVVTSGCCGADEFLKLQSYTLback to top mRNA from alignment at H-elongata_contig63633:354..1592- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63633.13938.1 ID=mRNA_H-elongata_contig63633.13938.1|Name=mRNA_H-elongata_contig63633.13938.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1239bp|location=Sequence derived from alignment at H-elongata_contig63633:354..1592- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63633:354..1592- >mRNA_H-elongata_contig63633.13938.1 ID=mRNA_H-elongata_contig63633.13938.1|Name=mRNA_H-elongata_contig63633.13938.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig63633:354..1592- (Himanthalia elongata Himel1 dioecious)back to top |