mRNA_H-elongata_contig63589.13935.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A6H5L121_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L121_9PHAE) HSP 1 Score: 333 bits (854), Expect = 2.530e-110 Identity = 158/183 (86.34%), Postives = 171/183 (93.44%), Query Frame = 1
Query: 1 QVFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKDRASAMA 549
+VFSE DVVDFPVSPYAATKKSCEL+AHTYSHLYGLN+AGLRFFTVYGPRGRPDMAPYKFIDLV RGQEIMQFGDGSTSRDYTYISDIVDGV+RSLDRP+GYQIYNLGNG+PV LS+FIKLVE+SVGT AKIRVCPEQPGDVPRTCAD+ KARAMLGYNP V FA+GI TV WY++RA+ A
Sbjct: 227 EVFSEKDVVDFPVSPYAATKKSCELMAHTYSHLYGLNIAGLRFFTVYGPRGRPDMAPYKFIDLVARGQEIMQFGDGSTSRDYTYISDIVDGVVRSLDRPAGYQIYNLGNGSPVSLSSFIKLVEKSVGTPAKIRVCPEQPGDVPRTCADISKARAMLGYNPSVAFADGIGKTVDWYQNRAAMNA 409
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A7S2V514_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V514_9STRA) HSP 1 Score: 288 bits (736), Expect = 9.410e-96 Identity = 133/176 (75.57%), Postives = 150/176 (85.23%), Query Frame = 1
Query: 7 FSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKDR 534
FSE DVVDFPVSPYAATKKSCELIAHTY HLYGLN+AGLRFFTVYGPRGRPDMAP+KFID + G EI QFGDGS+SRDYTY+ DIVDG++RS+D P GYQIYNLGNGNPV+L FI LVE+ G A I+ PEQPGDVPRTCA++ KAR +LGY+P+V F EGIR TV WYK+R
Sbjct: 68 FSEEDVVDFPVSPYAATKKSCELIAHTYHHLYGLNIAGLRFFTVYGPRGRPDMAPFKFIDRISSGVEIQQFGDGSSSRDYTYVDDIVDGIVRSIDTPLGYQIYNLGNGNPVKLLDFIHLVEKHCGQKAVIKQLPEQPGDVPRTCANISKARELLGYSPKVDFEEGIRRTVEWYKNR 243
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A835Z3G0_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G0_9STRA) HSP 1 Score: 293 bits (751), Expect = 8.630e-95 Identity = 136/177 (76.84%), Postives = 150/177 (84.75%), Query Frame = 1
Query: 1 QVFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKD 531
+VFSE D VD PVSPYAATKK+CEL+AHTY+HLYGLNVA LRFFTVYGPRGRPDMAPYKFI VC G+EI Q+GDGSTSRDYTYI DIVDGV+R+LDRP GYQ+YNLG G P RLS FI +VE VG A IRVCPEQPGDVPRTCAD+ KAR +LGY PRV F EGI TV+WYK+
Sbjct: 265 EVFSEDDAVDAPVSPYAATKKACELMAHTYAHLYGLNVAALRFFTVYGPRGRPDMAPYKFIAAVCAGREIQQYGDGSTSRDYTYIEDIVDGVVRALDRPLGYQVYNLGRGEPTRLSRFIGIVERCVGRAAVIRVCPEQPGDVPRTCADISKARRLLGYEPRVSFEEGIARTVAWYKE 441
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A6U1AQP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AQP1_9STRA) HSP 1 Score: 285 bits (730), Expect = 2.940e-93 Identity = 133/182 (73.08%), Postives = 151/182 (82.97%), Query Frame = 1
Query: 4 VFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKDRASAMA 549
+FSETDVVD+PVSPYAATKKSCEL+ +TY HLYGL+VAGLRFFTVYGPRGRPDMAP+KF+D V RG EI Q+GDGS+SRDYTYI DIVDGV+RSLDRP GYQIYNLGNGNPV L FI++VEES G A IR+ P+QPGDVPRT A++ KAR +LGY P+VPF EGI V WY MA
Sbjct: 165 LFSETDVVDYPVSPYAATKKSCELMGYTYHHLYGLHVAGLRFFTVYGPRGRPDMAPFKFVDRVVRGAEIQQYGDGSSSRDYTYIDDIVDGVVRSLDRPLGYQIYNLGNGNPVGLRDFIRIVEESTGKKATIRILPDQPGDVPRTAANINKARQLLGYEPKVPFREGIERLVKWYTTEYQTMA 346
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A835YHB0_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHB0_9STRA) HSP 1 Score: 286 bits (732), Expect = 3.670e-93 Identity = 132/175 (75.43%), Postives = 151/175 (86.29%), Query Frame = 1
Query: 4 VFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYK 528
+FSETD+VD PVSPYAA+KK+CEL+AHTY HLY LN+A LRFFTVYGPRGRPDMAP+KFID V RG+E+ QFGDGSTSRDYTYI+DIVDGV+R+LD P GYQIYNLG G P RLS FI LVE +VG A IRVCPEQPGDVPRTCAD+ KAR +LGY+P+V F +GI TV+WYK
Sbjct: 199 LFSETDLVDHPVSPYAASKKACELLAHTYHHLYNLNIAALRFFTVYGPRGRPDMAPFKFIDAVARGREMQQFGDGSTSRDYTYITDIVDGVLRALDTPLGYQIYNLGRGEPTRLSRFINLVEANVGRKAIIRVCPEQPGDVPRTCADISKARRLLGYDPKVSFEDGIAATVAWYK 373
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A7S4E526_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E526_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.140e-88 Identity = 127/177 (71.75%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 1 QVFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKD 531
Q+FSETD VD PVSPYAATKK+CEL+A+TY HLYG+NVAGLRFFTV+GPRGRPDMAP KF+D V +G I ++GDGS+SRDYTYI DIVDGVIR+LD P GYQIYNLGNG P RL+ FI+LVEE G A I V PEQPGDVPRTCAD+ KAR +LGY+P+ PF+EGI V WY +
Sbjct: 189 QLFSETDAVDAPVSPYAATKKACELLAYTYHHLYGMNVAGLRFFTVFGPRGRPDMAPLKFVDKVSKGLPIDRYGDGSSSRDYTYIDDIVDGVIRALDTPLGYQIYNLGNGRPTRLNDFIRLVEEHSGKQAIINVMPEQPGDVPRTCADISKARELLGYDPKTPFSEGIAKLVKWYNE 365
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: F0Y216_AURAN (NAD(P)-bd_dom domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y216_AURAN) HSP 1 Score: 270 bits (691), Expect = 1.580e-87 Identity = 122/182 (67.03%), Postives = 150/182 (82.42%), Query Frame = 1
Query: 4 VFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKDRASAMA 549
+FSETD VD PVSPYAATKK+CEL+A+TY HLY +N+AGLRFFTV+GPRGRPDMAP KF+D + RG+ I +FGDGS+SRDYTY+ D+VDGV+++LDRP GYQIYNLGNG+P RL+ FIKLVE+ G A IR P+QPGDVPRTCAD+ KA+ +L Y+P+ PF EGIR V WY+ +A A
Sbjct: 180 LFSETDAVDLPVSPYAATKKACELLAYTYHHLYKMNIAGLRFFTVFGPRGRPDMAPLKFVDKISRGEPIDRFGDGSSSRDYTYVDDVVDGVLKALDRPLGYQIYNLGNGSPTRLNDFIKLVEKYTGKNAVIRQKPDQPGDVPRTCADISKAKTLLDYDPQTPFPEGIRKLVEWYQSAEAAAA 361
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: F0YC12_AURAN (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC12_AURAN) HSP 1 Score: 268 bits (685), Expect = 4.590e-87 Identity = 119/176 (67.61%), Postives = 144/176 (81.82%), Query Frame = 1
Query: 4 VFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKD 531
+FSE D VDFPVSPYAATKK+CEL+A+TY HLY LN+A LRFFTV+GPRGRPDMAP KF+D + RG I QFGDGS+SRDYTY+ D+V G++ SLD P GYQ+YNLGNG+P +L FI LVEE+ G A+I + PEQPGDVPRTCAD+ KAR +LGY+P+ PF EGIR V+WY +
Sbjct: 154 LFSEKDSVDFPVSPYAATKKACELLAYTYHHLYKLNIAALRFFTVFGPRGRPDMAPLKFVDKISRGAPIQQFGDGSSSRDYTYVDDVVQGIVLSLDTPLGYQVYNLGNGSPTKLGDFIALVEEATGRKAEIEILPEQPGDVPRTCADISKARELLGYDPKTPFPEGIRKLVAWYNE 329
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A4D9DEP6_9STRA (NAD(P)-bd_dom domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEP6_9STRA) HSP 1 Score: 268 bits (686), Expect = 8.170e-85 Identity = 124/173 (71.68%), Postives = 144/173 (83.24%), Query Frame = 1
Query: 7 FSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWY 525
F E D VD PVSPYAATKK+CEL+ HTY LY +NV GLRFFTVYGPRGRPDMAP+KF+D V RG EI QFGDGS+SRDYTYI DIVDGV+R+LDRP GYQI+NLGNG+P RLS FI+LVE++VG A I+V P+QPGDVPRTCA++ KA+ +LGY P+V F EGI TV WY
Sbjct: 293 FGEDDYVDNPVSPYAATKKACELMTHTYHSLYKMNVTGLRFFTVYGPRGRPDMAPFKFVDRVSRGLEIQQFGDGSSSRDYTYIDDIVDGVVRALDRPLGYQIFNLGNGSPYRLSDFIRLVEKNVGKAAVIKVLPDQPGDVPRTCANISKAQELLGYQPKVSFEEGIARTVEWY 465
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Match: A0A7S1UNJ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNJ6_9STRA) HSP 1 Score: 259 bits (661), Expect = 3.340e-84 Identity = 119/175 (68.00%), Postives = 142/175 (81.14%), Query Frame = 1
Query: 7 FSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRGRPDMAPYKFIDLVCRGQEIMQFGDGSTSRDYTYISDIVDGVIRSLDRPSGYQIYNLGNGNPVRLSTFIKLVEESVGTTAKIRVCPEQPGDVPRTCADVCKARAMLGYNPRVPFAEGIRHTVSWYKD 531
FSE + V+ PVSPYAA+KK+CEL+A+TY HLY LNV GLRFFTVYGPRGRPDMAP+KFID + RG EI QFGDGS+SRDYTYI DIVDG++R++DRP Y+I+NLG G+ L FI LV++ VG AKI+V P+QPGDVP TCADV KA+ MLGY +VPF EGIR T WYK+
Sbjct: 65 FSEEEAVEHPVSPYAASKKACELLAYTYHHLYKLNVTGLRFFTVYGPRGRPDMAPFKFIDRISRGVEIQQFGDGSSSRDYTYIDDIVDGIVRAVDRPHRYEIFNLGKGSGTSLGDFISLVQKHVGKEAKIKVLPDQPGDVPYTCADVRKAQQMLGYRSKVPFEEGIRRTAKWYKE 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63589.13935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63589.13935.1 >prot_H-elongata_contig63589.13935.1 ID=prot_H-elongata_contig63589.13935.1|Name=mRNA_H-elongata_contig63589.13935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp QVFSETDVVDFPVSPYAATKKSCELIAHTYSHLYGLNVAGLRFFTVYGPRback to top mRNA from alignment at H-elongata_contig63589:245..1336+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63589.13935.1 ID=mRNA_H-elongata_contig63589.13935.1|Name=mRNA_H-elongata_contig63589.13935.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1092bp|location=Sequence derived from alignment at H-elongata_contig63589:245..1336+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63589:245..1336+ >mRNA_H-elongata_contig63589.13935.1 ID=mRNA_H-elongata_contig63589.13935.1|Name=mRNA_H-elongata_contig63589.13935.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1176bp|location=Sequence derived from alignment at H-elongata_contig63589:245..1336+ (Himanthalia elongata Himel1 dioecious)back to top |