mRNA_H-elongata_contig6354.13930.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6354.13930.1
Unique NamemRNA_H-elongata_contig6354.13930.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 7.200e-48
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTFN+ T A +G N IGH + ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E I    G++   +ECIS  L+K R+ I     VTFVV YAPTE   +T G     K  +  A+++ +  V +R+++ +L+ ANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:    8 DLSFGTFNVHTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGRRRDGCCDA--KIMGANGRDIMNNNGERLLELASDNQLSLTNTYFPTPKGGVQHTF 231          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.230e-46
Identity = 96/226 (42.48%), Postives = 139/226 (61.50%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTF+V YAPTE    TEG     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:  174 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 397          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 5.450e-46
Identity = 96/226 (42.48%), Postives = 139/226 (61.50%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT++  PK GV +TF
Sbjct:   85 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYVQTPKGGVQHTF 308          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 6.020e-45
Identity = 93/226 (41.15%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R G   I   GY + +S    G K ++  HGVG+ I E +    G++   +ECI   L+K R+ I     V FVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:   80 DLSFGTFNVRTLACSGRNPIGHNVMTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 303          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 2.010e-44
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTFN+ T A +G N IGH + ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:  656 DLSFGTFNVCTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 879          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.360e-44
Identity = 96/226 (42.48%), Postives = 138/226 (61.06%), Query Frame = 1
Query:   37 DELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAP-TEEATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            D++ FGTFN+RT A +G N IGH + ++++ C T GCDVIGLQET+R+G   I   GY V +S    G K ++  HGVG+AI E + + AG++   +ECIS  L+K R+ I     VTFVV YAP T   T G     K     A+++ +  V +R+++ +L+DANA T  R +G  DA  K++G  GRD++N NG+        N+L+L NT+   PK GV +TF
Sbjct:  121 DDVSFGTFNVRTLAYSGRNPIGHNVMTVMQICSTNGCDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAIREVHSRDHLVVLMDANAHTGGRRDGCCDA--KIMGAYGRDIMNNNGERFLGLALGNQLSLTNTYFRTPKGGVQHTF 344          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5L660_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L660_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.740e-43
Identity = 89/218 (40.83%), Postives = 132/218 (60.55%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIP 669
            +L FGTFN+RT A +G N IGH + ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECI   L+K R+ I     +TFVV YAPTE    T G     K  +  A+++ +  V + +++ +L+DANART +R +G  DA  K++GV GRD++N NG+ L      N+L+L NT+   P
Sbjct:  147 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLMKVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVHSHDHLVVLMDANARTGRRRDGCCDA--KIMGVYGRDIMNNNGERLLGLASNNQLSLTNTYFRTP 362          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.530e-42
Identity = 92/226 (40.71%), Postives = 136/226 (60.18%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTEEA--TEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTF++RT   +G N IGH +  +++     GCDVIGLQET+R+G   I   GY + +S    G K ++ + GVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+ L      N+L+L NT+   PK GV +TF
Sbjct:  154 DLSFGTFSVRTLVYSGRNPIGHNVMKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTF 377          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5K5A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A7_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 6.400e-41
Identity = 91/226 (40.27%), Postives = 135/226 (59.73%), Query Frame = 1
Query:   40 ELIFGTFNIRTAAVNGVNGIGH-IDSLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            +L FGTFN+RT A +G N IGH + ++++     GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I +   V  VV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R +G  DA  K++G  GRD++N NG+        N+L+L NT+   PK  V +TF
Sbjct:  132 DLSFGTFNVRTLAYSGRNPIGHNVMTVMQIWSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGHTCGVISVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDA--KIMGAYGRDIMNNNGERRLGLASDNQLSLTNTYFRTPKGKVQHTF 355          
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.140e-39
Identity = 82/201 (40.80%), Postives = 120/201 (59.70%), Query Frame = 1
Query:  112 SLLRPCDTRGCDVIGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNKAGKDDIAIECISACLLKARISIKYNF-VTFVVAYAPTE--EATEG----EKAKYIEAINSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKNGKLLPSFTEYNKLALLNTFLCIPKNGVSYTF 693
            ++++ C   GCDVIGLQET+R+G   I   GY + +S    G K ++  HGVG+AI E +    G++   +ECIS  L+K R+ I     VTFVV YAPTE    T G     K  +  A+++ +  V +R+++ +L+DANART +R   GG  ++KVLG  GRD++N NG+ L      N+ +L NT+   PK GV +TF
Sbjct:    2 TVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTF 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6354.13930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZE6_9PHAE7.200e-4842.04Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE2.230e-4642.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JMB4_9PHAE5.450e-4642.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KV75_9PHAE6.020e-4541.15Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K1H7_9PHAE2.010e-4442.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDU4_9PHAE2.360e-4442.48Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L660_9PHAE5.740e-4340.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN7_9PHAE4.530e-4240.71Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K5A7_9PHAE6.400e-4140.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBZ6_9PHAE2.140e-3940.80Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6354contigH-elongata_contig6354:1045..1740 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score73.2
Seed ortholog evalue1.8e-10
Seed eggNOG ortholog7668.SPU_010878-tr
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGs39VM0@33154,3BKMM@33208,3D1CS@33213,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size696
Cds size696
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931018.9157217-CDS-H-elongata_contig6354:1044..17401622931018.9157217-CDS-H-elongata_contig6354:1044..1740Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6354 1045..1740 -
1691679664.4500432-CDS-H-elongata_contig6354:1044..17401691679664.4500432-CDS-H-elongata_contig6354:1044..1740Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6354 1045..1740 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6354.13930.1prot_H-elongata_contig6354.13930.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6354 1045..1740 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6354.13930.1

>prot_H-elongata_contig6354.13930.1 ID=prot_H-elongata_contig6354.13930.1|Name=mRNA_H-elongata_contig6354.13930.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MKHRTTRVRSLLDELIFGTFNIRTAAVNGVNGIGHIDSLLRPCDTRGCDV
IGLQETKRDGYSEITASGYRVYFSCGCTGVKGEKEQHGVGLAIMEEIVNK
AGKDDIAIECISACLLKARISIKYNFVTFVVAYAPTEEATEGEKAKYIEA
INSTVSSVPAREYVFILIDANARTEKRGEGGGDAESKVLGVCGRDVLNKN
GKLLPSFTEYNKLALLNTFLCIPKNGVSYTF*
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mRNA from alignment at H-elongata_contig6354:1045..1740-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6354.13930.1 ID=mRNA_H-elongata_contig6354.13930.1|Name=mRNA_H-elongata_contig6354.13930.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=696bp|location=Sequence derived from alignment at H-elongata_contig6354:1045..1740- (Himanthalia elongata Himel1 dioecious)
ATGAAACACAGGACCACCAGGGTGAGGTCTCTGCTGGACGAGCTTATTTT CGGCACGTTCAACATTCGCACAGCAGCTGTAAACGGCGTCAACGGCATTG GTCATATTGACTCCCTCTTGAGACCCTGTGATACGAGAGGGTGTGATGTG ATTGGATTGCAGGAGACAAAGCGGGACGGATATTCTGAAATAACTGCATC TGGATACCGGGTCTATTTCAGTTGTGGTTGCACCGGGGTCAAAGGGGAAA AGGAGCAACATGGGGTGGGACTAGCAATAATGGAGGAAATCGTTAACAAG GCCGGCAAGGACGACATCGCAATCGAGTGCATCAGCGCATGTCTCCTGAA GGCTCGAATATCGATTAAATATAATTTTGTCACGTTTGTGGTAGCCTACG CTCCGACCGAGGAAGCGACGGAGGGAGAGAAGGCCAAGTATATCGAAGCC ATCAACAGCACCGTATCATCAGTGCCCGCTCGGGAATACGTCTTCATTTT GATCGACGCGAATGCTAGGACAGAGAAAAGGGGTGAGGGAGGCGGGGACG CTGAAAGCAAGGTATTGGGCGTATGTGGCCGAGACGTGCTCAACAAAAAT GGCAAACTACTGCCGAGTTTCACAGAATACAACAAACTCGCTCTTCTTAA CACATTTTTATGTATCCCCAAAAATGGCGTGTCGTACACATTTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig6354:1045..1740-

>mRNA_H-elongata_contig6354.13930.1 ID=mRNA_H-elongata_contig6354.13930.1|Name=mRNA_H-elongata_contig6354.13930.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig6354:1045..1740- (Himanthalia elongata Himel1 dioecious)
ATGAAACACAGGACCACCAGGGTGAGGTCTCTGCTGGACGAGCTTATTTT
CGGCACGTTCAACATTCGCACAGCAGCTGTAAACGGCGTCAACGGCATTG
GTCATATTGACTCCCTCTTGAGACCCTGTGATACGAGAGGGTGTGATGTG
ATTGGATTGCAGGAGACAAAGCGGGACGGATATTCTGAAATAACTGCATC
TGGATACCGGGTCTATTTCAGTTGTGGTTGCACCGGGGTCAAAGGGGAAA
AGGAGCAACATGGGGTGGGACTAGCAATAATGGAGGAAATCGTTAACAAG
GCCGGCAAGGACGACATCGCAATCGAGTGCATCAGCGCATGTCTCCTGAA
GGCTCGAATATCGATTAAATATAATTTTGTCACGTTTGTGGTAGCCTACG
CTCCGACCGAGGAAGCGACGGAGGGAGAGAAGGCCAAGTATATCGAAGCC
ATCAACAGCACCGTATCATCAGTGCCCGCTCGGGAATACGTCTTCATTTT
GATCGACGCGAATGCTAGGACAGAGAAAAGGGGTGAGGGAGGCGGGGACG
CTGAAAGCAAGGTATTGGGCGTATGTGGCCGAGACGTGCTCAACAAAAAT
GGCAAACTACTGCCGAGTTTCACAGAATACAACAAACTCGCTCTTCTTAA
CACATTTTTATGTATCCCCAAAAATGGCGTGTCGTACACATTTTAAATGA
AACACAGGACCACCAGGGTGAGGTCTCTGCTGGACGAGCTTATTTTCGGC
ACGTTCAACATTCGCACAGCAGCTGTAAACGGCGTCAACGGCATTGGTCA
TATTGACTCCCTCTTGAGACCCTGTGATACGAGAGGGTGTGATGTGATTG
GATTGCAGGAGACAAAGCGGGACGGATATTCTGAAATAACTGCATCTGGA
TACCGGGTCTATTTCAGTTGTGGTTGCACCGGGGTCAAAGGGGAAAAGGA
GCAACATGGGGTGGGACTAGCAATAATGGAGGAAATCGTTAACAAGGCCG
GCAAGGACGACATCGCAATCGAGTGCATCAGCGCATGTCTCCTGAAGGCT
CGAATATCGATTAAATATAATTTTGTCACGTTTGTGGTAGCCTACGCTCC
GACCGAGGAAGCGACGGAGGGAGAGAAGGCCAAGTATATCGAAGCCATCA
ACAGCACCGTATCATCAGTGCCCGCTCGGGAATACGTCTTCATTTTGATC
GACGCGAATGCTAGGACAGAGAAAAGGGGTGAGGGAGGCGGGGACGCTGA
AAGCAAGGTATTGGGCGTATGTGGCCGAGACGTGCTCAACAAAAATGGCA
AACTACTGCCGAGTTTCACAGAATACAACAAACTCGCTCTTCTTAACACA
TTTTTATGTATCCCCAAAAATGGCGTGTCGTACACATTTTAA
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