mRNA_H-elongata_contig63505.13928.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: D8LJ83_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ83_ECTSI) HSP 1 Score: 285 bits (729), Expect = 7.450e-95 Identity = 133/180 (73.89%), Postives = 152/180 (84.44%), Query Frame = 1
Query: 10 QQHLVRLRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
++HL + PLV+MDI+L P +RPQRVVFQL+SQDCP TCENFR LCTGEK S NG +L YK SPFHRVVRDGWVQGGDIVSG GDGG S YG FGDE+F++KL+E GVLAMA+DGPHTN SQFLVTL PQ WLNH+VVGFGRVI GL VLR++SE ETLNQRPV ECKV+ CG++TP
Sbjct: 78 EKHLTSSQCPLVFMDISLDPSARPQRVVFQLYSQDCPTTCENFRALCTGEKGMSSNGKKLNYKGSPFHRVVRDGWVQGGDIVSGTGDGGWSIYGEVFGDESFAIKLNETGVLAMANDGPHTNGSQFLVTLAPQPWLNHKVVGFGRVIKGLKVLREMSEGETLNQRPVMECKVHKCGQITP 257
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: A0A7S2V0W8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W8_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.370e-62 Identity = 98/166 (59.04%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 46 YMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGEL 543
YMDI G S PQRV FQLFS CPKTCENFR+LC G N L YK SPFHRVV+ GWVQGGDI+SG+GDGG+S YG F DE F+V+ + G+LAMA+ GPHTN SQF +TL P WLN+R V FGRV G+ ++R ++ +ET NQRP +C V +CGE+
Sbjct: 142 YMDIKTG-NSDPQRVEFQLFSDICPKTCENFRVLCEG------NRQMLQYKGSPFHRVVKGGWVQGGDIISGSGDGGISIYGETFPDETFAVEFNTEGILAMANAGPHTNGSQFFITLGPLPWLNNRAVAFGRVARGMEIIRGMNNMETENQRPKMDCTVVDCGEI 300
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: A0A674HWS8_TERCA (Peptidyl-prolyl cis-trans isomerase n=10 Tax=Cryptodira TaxID=8464 RepID=A0A674HWS8_TERCA) HSP 1 Score: 196 bits (499), Expect = 3.450e-60 Identity = 90/183 (49.18%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 1 DLFQQHLVRLRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
D +H+ ++ VY+DIA+ + ++F+L+S CPKTCENFR LCTGE S +G LTYK S FHR+V++GW+QGGDI +G GDGG S YG F DENFS+ ++ G+L MA+ G H+N SQF +TL P +++ + V FG +I G VL+++ ++ T N+RPV ECK+NNCG L P
Sbjct: 68 DFCTKHMQNTKHVFVYLDIAIQEQPTGT-LLFELYSDMCPKTCENFRSLCTGEAGTSRSGLELTYKESVFHRLVKNGWIQGGDITAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGYLIEGTEVLQKLEDVSTYNERPVVECKINNCGVLVP 249
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: A0A3P8YMY6_ESOLU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YMY6_ESOLU) HSP 1 Score: 196 bits (498), Expect = 1.750e-59 Identity = 91/183 (49.73%), Postives = 128/183 (69.95%), Query Frame = 1
Query: 1 DLFQQHLVRLRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
D + +HL + VYMDI + +S R++F+LF++ CPKTC+NF+ LCTGE KS + L+YK S FHRVV +GW+QGGDI SG G+GG S YG FGDE+F+V + G+L MA+ GPH+NSSQF +TL P W++ + V FG+V+ G +VLR++ E+ T N+RP +C+V +CG P
Sbjct: 111 DYYSKHLRSTGHTFVYMDIFISGES-VGRLLFELFTELCPKTCKNFQTLCTGEAGKSQSDLLLSYKGSIFHRVVLNGWIQGGDIASGKGNGGESIYGPTFGDESFAVSHSKRGILGMANQGPHSNSSQFYITLQPALWMDRKYVAFGQVVEGQDVLRRLEEVPTYNERPKPQCEVADCGVFEP 292
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: W5KSE7_ASTMX (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=W5KSE7_ASTMX) HSP 1 Score: 196 bits (498), Expect = 1.800e-59 Identity = 91/184 (49.46%), Postives = 129/184 (70.11%), Query Frame = 1
Query: 1 DLFQQHLVRLRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIV-SGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
+ +QQHL+ + VYMD+ +G ++ R++F+LFS CPKTC+NF+ LCTGE S N L+YKNS FHRVV +GW+QGGDI +G G+GG S YGA FGDE F+V ++ G+L MA+ GPH+N SQF +TL P W++ V FG+V+ G +VLR++ E+ T N+RP ++C++ CG P
Sbjct: 111 EYYQQHLLNTGHVFVYMDVEIGGEAAG-RLLFELFSDLCPKTCKNFKALCTGEAGMSQNQLMLSYKNSLFHRVVPNGWLQGGDITPAGKGNGGESIYGATFGDEGFAVSHNKRGILGMANQGPHSNGSQFYITLQPALWMDTNYVAFGQVVEGTDVLRKLEEVPTYNERPKQDCRIVACGLFNP 293
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: A0A8C4K701_DRONO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=A0A8C4K701_DRONO) HSP 1 Score: 194 bits (493), Expect = 2.710e-59 Identity = 90/184 (48.91%), Postives = 129/184 (70.11%), Query Frame = 1
Query: 1 DLFQQHLVRLRNPLVYMDIALGPKSRP-QRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
D +H+ ++ VY+DIA+ + +P R++F+LFS CPKTCENFR+LCTG S +G +L Y+NS FHR+V++GW+QGGDIV+G GDGG S YG F DENFS++ ++ G+L MA+ G H+N SQF +TL P +L+ + V FG++I G L+++ + T N+RPV ECK+ NCG P
Sbjct: 67 DFCTKHMKNSQHVFVYLDIAV--QEQPIGRLLFELFSDACPKTCENFRVLCTGGWRSSSSGLKLAYRNSIFHRIVKNGWIQGGDIVAGRGDGGESIYGPTFEDENFSIRHNKRGILGMANKGRHSNGSQFYITLQPAPYLDKKHVAFGQLIEGTETLQKLEAVSTYNERPVEECKIINCGAFEP 248
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: A0A836C6W1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W1_9STRA) HSP 1 Score: 192 bits (488), Expect = 4.360e-58 Identity = 98/178 (55.06%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 28 LRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAY----GAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
+RNPLVYMD+ +G K PQRVVF+L+S CP+ CENFR LCT ++ TY +PFHRVV GWVQGGD+ GAGD G A F DE F VK D AGVLAMA+ GPHTN+SQFLV L WL+ R V FGRV G+ LR + ++ TLNQRP+R+ +V CGEL P
Sbjct: 111 VRNPLVYMDVDVGGK--PQRVVFELYSDVCPRACENFRRLCTSRRAGQ------TYLGTPFHRVVPGGWVQGGDVAGGAGDRGSCALDNCASGTFEDETFDVKFDAAGVLAMANAGPHTNASQFLVALAQLPWLDRRAVAFGRVARGMRALRALEDVATLNQRPLRDARVVACGELAP 280
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: UPI00193FA8DD (probable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X2 n=2 Tax=Testudinoidea TaxID=8486 RepID=UPI00193FA8DD) HSP 1 Score: 191 bits (486), Expect = 1.100e-57 Identity = 88/183 (48.09%), Postives = 125/183 (68.31%), Query Frame = 1
Query: 1 DLFQQHLVRLRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
D +H+ ++ VY+DIA+ + ++F+L+S CPKTC NFR LCTGE S +G LTYK S FHR+V++GW+QGGDI +G GDGG S YG F DENFS+ ++ G+L MA+ G H+N SQF +TL P +++ + V FG++I G VL+++ ++ T N+RPV ECK+ NCG L P
Sbjct: 110 DFCTKHMQNSKHVFVYLDIAIQEQPTGT-LLFELYSDMCPKTCANFRSLCTGEAGTSRSGMELTYKESVFHRLVKNGWIQGGDITAGRGDGGESIYGPTFEDENFSIPHNKRGILGMANKGRHSNGSQFYITLQPAPYMDKKYVAFGQLIEGTEVLQKLEDVSTYNERPVVECKIINCGVLVP 291
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: UPI00052F3E73 (LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase-like 6 n=1 Tax=Tinamus guttatus TaxID=94827 RepID=UPI00052F3E73) HSP 1 Score: 191 bits (485), Expect = 1.240e-57 Identity = 91/184 (49.46%), Postives = 126/184 (68.48%), Query Frame = 1
Query: 1 DLFQQHLVRLRNPLVYMDIALGPKSRP-QRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
D +H+ ++ VY+DI + + +P R++F+LFS CPKTCENFR+LCTG + +G LTYKNS FHRVV +GW+QGGDIV+G GDGG S YG F DENF+++ + G+L MA+ G H+N SQF VTL P +L+ + V FG++I G L+++ + T N+RPV ECK+ NCG P
Sbjct: 102 DFCTKHMRDSQHVFVYLDITI--QEQPIGRLLFELFSDVCPKTCENFRVLCTGGITSPSSGLHLTYKNSVFHRVVENGWIQGGDIVAGRGDGGESIYGPTFEDENFAIRHSKRGILGMANKGRHSNGSQFYVTLQPAPYLDKKHVAFGQLIEGTETLQKLEAVSTYNERPVEECKIVNCGVFEP 283
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Match: A0A7K9AUF6_DRONO (Peptidyl-prolyl cis-trans isomerase (Fragment) n=3 Tax=Casuariiformes TaxID=8784 RepID=A0A7K9AUF6_DRONO) HSP 1 Score: 190 bits (483), Expect = 1.800e-57 Identity = 88/170 (51.76%), Postives = 123/170 (72.35%), Query Frame = 1
Query: 43 VYMDIALGPKSRP-QRVVFQLFSQDCPKTCENFRMLCTGEKSKSPNGYRLTYKNSPFHRVVRDGWVQGGDIVSGAGDGGVSAYGAEFGDENFSVKLDEAGVLAMASDGPHTNSSQFLVTLMPQSWLNHRVVGFGRVITGLNVLRQISELETLNQRPVRECKVNNCGELTP 549
VY+DIA+ + +P R++F+LFS CPKTCENFR+LCTG S +G +L Y+NS FHR+V++GW+QGGDIV+G GDGG S YG F DENFS++ ++ G+L MA+ G H+N SQF +TL P +L+ + V FG++I G L+++ + T N+RPV ECK+ NCG P
Sbjct: 105 VYLDIAV--QEQPIGRLLFELFSDACPKTCENFRVLCTGGWRSSSSGLKLAYRNSIFHRIVKNGWIQGGDIVAGRGDGGESIYGPTFEDENFSIRHNKRGILGMANKGRHSNGSQFYITLQPAPYLDKKHVAFGQLIEGTETLQKLEAVSTYNERPVEECKIINCGAFEP 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63505.13928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63505.13928.1 >prot_H-elongata_contig63505.13928.1 ID=prot_H-elongata_contig63505.13928.1|Name=mRNA_H-elongata_contig63505.13928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp DLFQQHLVRLRNPLVYMDIALGPKSRPQRVVFQLFSQDCPKTCENFRMLCback to top mRNA from alignment at H-elongata_contig63505:1503..2570- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63505.13928.1 ID=mRNA_H-elongata_contig63505.13928.1|Name=mRNA_H-elongata_contig63505.13928.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1068bp|location=Sequence derived from alignment at H-elongata_contig63505:1503..2570- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63505:1503..2570- >mRNA_H-elongata_contig63505.13928.1 ID=mRNA_H-elongata_contig63505.13928.1|Name=mRNA_H-elongata_contig63505.13928.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1098bp|location=Sequence derived from alignment at H-elongata_contig63505:1503..2570- (Himanthalia elongata Himel1 dioecious)back to top |