prot_H-elongata_contig63488.13925.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63488.13925.1
Unique Nameprot_H-elongata_contig63488.13925.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.920e-58
Identity = 96/105 (91.43%), Postives = 97/105 (92.38%), Query Frame = 0
Query:   35 RPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            RPDFPALTAREMGGGKDDFR IRCPPHRLTPLRN WENIVTP+VEHMKLQIR   FNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDA ALLRL  L
Sbjct:   48 RPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNCWENIVTPTVEHMKLQIR---FNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAVALLRLDDL 149          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK)

HSP 1 Score: 147 bits (370), Expect = 1.230e-41
Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0
Query:   27 ETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            ET      RP+FPAL+A+EM GG ++FR IR P HR TPLR  WENI+ P VEHMKLQIR   FN KTR+VE+K+S+HTED  A+QK ADFIQAFM+GFEVQDA ALLRL  L
Sbjct:   27 ETEQSGTIRPNFPALSAQEMAGGIEEFRRIRVPAHRYTPLREQWENIMQPVVEHMKLQIR---FNPKTRSVEMKTSEHTEDVGAIQKAADFIQAFMMGFEVQDAVALLRLEDL 136          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.350e-41
Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 0
Query:   31 GAAPRPDFPALTAREM-GGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            G A +P+FP L+A+++  G K D R IRCPPHRLTPLR SWE+IV P VEHMKLQIR   FN K RNVELK+S+ TED SALQ++ADF+QAFMLGFEVQDA ALLRL  L
Sbjct:   38 GGAMKPNFPPLSAQQLRAGAKSDIRRIRCPPHRLTPLRASWEHIVAPVVEHMKLQIR---FNPKARNVELKASQFTEDPSALQRSADFVQAFMLGFEVQDAVALLRLEDL 144          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: A0A2D4BJV4_PYTIN (RNA-binding protein PNO1-like protein n=4 Tax=Pythium TaxID=4797 RepID=A0A2D4BJV4_PYTIN)

HSP 1 Score: 144 bits (362), Expect = 2.210e-40
Identity = 77/133 (57.89%), Postives = 96/133 (72.18%), Query Frame = 0
Query:    7 ATGVVEAAKGDVEMDMEESGETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            A  + + A+ D  MDME      D AA RP+FPAL+A+E  GGK+DFR +R P HR TPL+N W N++TP V+H+KLQIR    N KTR +ELK+S  TED+ ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   15 AQAIAQQAQHDHAMDMEAD----DAAAMRPNFPALSAQEAEGGKNDFRRVRVPAHRYTPLKNDWPNLMTPIVDHLKLQIR---MNTKTRCIELKNSPFTEDSGALQKAADFVQAYMMGFEVQDAVALLRLEDL 140          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: H3G8F2_PHYRM (KH domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G8F2_PHYRM)

HSP 1 Score: 142 bits (357), Expect = 9.040e-40
Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 0
Query:   18 VEMDMEESGETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            V+M++EE G        RP+FPAL+A++  GGK+DFR +R P HR TPL+N W NI+ P VEH+KLQIR    N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   16 VDMEIEEDG------VVRPNFPALSAQQQAGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDL 128          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: G4Z4N5_PHYSP (KH domain-containing protein n=15 Tax=Peronosporaceae TaxID=4777 RepID=G4Z4N5_PHYSP)

HSP 1 Score: 142 bits (358), Expect = 9.370e-40
Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 0
Query:   17 DVEMDMEESGETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            D  MD EE+    D    RP+FPAL+A++  GGK+DFR +R P HR TPL+N W NI+ P VEH+KLQIR    N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   27 DTMMDTEEN----DSGVVRPNFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDL 142          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: A0A6A3YBU7_9STRA (KH domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3YBU7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.290e-39
Identity = 73/121 (60.33%), Postives = 87/121 (71.90%), Query Frame = 0
Query:   19 EMDMEESGETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            E DM E  E  +    RP FPAL+A++  GGK+DFR +R P HR TPL+N W NI+ P VEH+KLQIR    N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   24 ETDMMEVEEVEEQGVVRPHFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPVVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDL 141          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: A0A2P4X7L0_9STRA (RNA-binding protein PNO1-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7L0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.540e-39
Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   18 VEMDMEESGETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            ++MD EE          RP+FPAL+A++  GGK+DFR +R P HR TPL+N W NI+ P VEH+KLQIR    N KTR +ELK+S HT DA ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   27 MDMDTEED-------VVRPNFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQDAVALLRLEDL 138          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: K3WKW4_GLOUD (KH domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WKW4_GLOUD)

HSP 1 Score: 138 bits (348), Expect = 3.000e-38
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 0
Query:   35 RPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            RP FPAL+A+E  GGK+DFR +R P HR TPL+N W NI+ P VEH++LQIR    N KTR +ELK+S+HT DA ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   41 RPSFPALSAQEQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLRLQIR---MNTKTRCIELKNSEHTIDAGALQKAADFVQAYMMGFEVQDAVALLRLEDL 142          
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Match: A0A3M6VD79_9STRA (KH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD79_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.250e-38
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 0
Query:   18 VEMDMEESGETADGAAPRPDFPALTAREMGGGKDDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL 139
            +++++EE+G        RP+FPAL+A++  GGK+DFR +R P HR TPL+N W NI+ P VEH+KLQIR    N KTR +ELK+S HT D  ALQK ADF+QA+M+GFEVQDA ALLRL  L
Sbjct:   30 MDVEIEENG------VVRPNFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIR---MNTKTRCIELKNSPHTTDVGALQKAADFVQAYMMGFEVQDAVALLRLEDL 142          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63488.13925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD80_ECTSI2.920e-5891.43KH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6T5QRH5_HETAK1.230e-4166.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZET5_9STRA4.350e-4169.09RNA-binding protein PNO1-like protein n=1 Tax=Trib... [more]
A0A2D4BJV4_PYTIN2.210e-4057.89RNA-binding protein PNO1-like protein n=4 Tax=Pyth... [more]
H3G8F2_PHYRM9.040e-4059.84KH domain-containing protein n=3 Tax=Peronosporace... [more]
G4Z4N5_PHYSP9.370e-4060.16KH domain-containing protein n=15 Tax=Peronosporac... [more]
A0A6A3YBU7_9STRA1.290e-3960.33KH domain-containing protein n=6 Tax=Peronosporace... [more]
A0A2P4X7L0_9STRA2.540e-3959.02RNA-binding protein PNO1-like protein (Fragment) n... [more]
K3WKW4_GLOUD3.000e-3864.76KH domain-containing protein n=2 Tax=Pythiaceae Ta... [more]
A0A3M6VD79_9STRA4.250e-3857.38KH domain-containing protein n=1 Tax=Peronospora e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039912Pre-rRNA-processing protein PNO1-likePANTHERPTHR12826:SF13RNA-BINDING PROTEIN PNO1coord: 25..137
NoneNo IPR availablePANTHERPTHR12826FAMILY NOT NAMEDcoord: 25..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63488contigH-elongata_contig63488:27..1765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63488.13925.1mRNA_H-elongata_contig63488.13925.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63488 27..1765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63488.13925.1 ID=prot_H-elongata_contig63488.13925.1|Name=mRNA_H-elongata_contig63488.13925.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
QVEAAAATGVVEAAKGDVEMDMEESGETADGAAPRPDFPALTAREMGGGK
DDFRSIRCPPHRLTPLRNSWENIVTPSVEHMKLQIRRVEFNRKTRNVELK
SSKHTEDASALQKTADFIQAFMLGFEVQDAAALLRLGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039912PNO1-like