prot_H-elongata_contig63472.13923.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63472.13923.1 vs. uniprot
Match: A0A0J7K9Y8_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K9Y8_LASNI) HSP 1 Score: 57.0 bits (136), Expect = 1.120e-6 Identity = 45/168 (26.79%), Postives = 73/168 (43.45%), Query Frame = 0
Query: 6 VQRSNAPNDAWRKLETHYRAKGTREILRVSHEINGKIMERRGDPFKFMMEIDRLAADLNRLGDKSVTELRKCVIIVSGLPTDYEMECRMLENNPVGLNRAEIERVVGNQYNRLLRQQQNPKAMSASKGHITVNHGKEGDRRHHPKFNRKCFNCGKGGHYARDCRTSEE 173
+Q S P +AW KL + +G + + + +E +++ I A L L D V E +++SGLP +Y+ LE++ + G+ L Q+ +A+ ++ G + K G + K RKCF CGK GH+A CR EE
Sbjct: 73 IQGSTTPREAWNKLNNAFEDRGLTRKVGLLRTLTSTRLEDCTSVEEYVNRITMTAHSLKEL-DFDVNEEMVGALLLSGLPEEYKPMIMGLESSGTP--------ITGDAMKVKLMQEVKLEAVQSTAGSEAALYTKAGKKNAKNKQKRKCFTCGKIGHFAAKCRNKEE 231
BLAST of mRNA_H-elongata_contig63472.13923.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 57.0 bits (136), Expect = 2.580e-6 Identity = 46/163 (28.22%), Postives = 76/163 (46.63%), Query Frame = 0
Query: 15 AWRKLETHYRAKGTREILRVSHEINGKIMERRGDPFKFMMEIDRLAADLNRLGDKSVTELRKCVIIVSGLPTDYEMECRMLENNPVGLNRAEIERVVGNQYNRLLRQQQNPKAMSASKGHITVN-----HGKEGDR----RHHPKFNRKCFNCGKGGHYARDC 168
AW L Y + ++ ++ ME K + + D L L LG+ + E R+ VI++S LPT+YE+ C ++EN E++ + +Y RL +++ +A+ A+ G +G + R + F KCFNCG+ GH RDC
Sbjct: 83 AWNTLRDFYNRTTMHNRVTMTRRLHEFKMEGGVTMAKHLDDFDELIVGLQTLGEP-LDEARQLVILLSSLPTEYELICSIVENAK-DFTLIEVKEKLLKEYERLDKKEGAERALKATANGSKFRCAKTFRGGKGSKAFGSRKNGGFKGKCFNCGQVGHMKRDC 243
BLAST of mRNA_H-elongata_contig63472.13923.1 vs. uniprot
Match: H3GVH0_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GVH0_PHYRM) HSP 1 Score: 52.0 bits (123), Expect = 9.200e-5 Identity = 44/170 (25.88%), Postives = 78/170 (45.88%), Query Frame = 0
Query: 6 VQRSNAPNDAWRKLETHYRAKGTREILRVSHEINGKIMERRGDPFKFMMEIDRLAADLNRLGDKSVTELRKCVIIVSGLPTDYEMECRMLENNPVGLNRAEIERVVGNQYNRLLRQQQNPK-----AMSASKGHITVNHGKEGDRRHHPKFNRKCFNCGKGGHYARDCRT 170
V + + +AW KLE +RA+ L + + + K + E+++L ++ G + E C ++ LP YE +++ + + ++ +VG +RQ+ + + A+ A+KG+ K+ R P CFNCGK GHYARDCR+
Sbjct: 59 VVTAKSAKEAWDKLEKFHRAQDVANRLWLKEKFSS-FKYTTSSVSKHVTELEQLVLEMKSAGCEPSDE-DVCATLLRSLPASYES---LVQAFRMSMTELKLTDLVGKSIAEEVRQKDSTRIEEATALLANKGYAKDTKKKQQGGRRKPSG--ACFNCGKIGHYARDCRS 221 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63472.13923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig63472.13923.1 ID=prot_H-elongata_contig63472.13923.1|Name=mRNA_H-elongata_contig63472.13923.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bpback to top |