mRNA_H-elongata_contig6344.13919.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6344.13919.1
Unique NamemRNA_H-elongata_contig6344.13919.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 2.010e-74
Identity = 167/358 (46.65%), Postives = 210/358 (58.66%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKP-QVDPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLAT--AGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFWR 1066
            LN+V +W LGI G++ T  N  ME LM++LAA VG FSHSAVNN ELK +Q L  +   IYE IRRNDTRW +Q  MM RLL LK AIV+YFR + ++ R+LS RE +VTNEVCS+LD VAEVT+K+ GA +T+ISQ  F M E+ +I      +IR PD+P   D V  + I+  DL  E     +V +  M KK LG    P+ERI  LLDPRRK  S +  VNGS D+K  AI ++ +VA  F            A         XXXXXXXX      +P  KK +VLS +E+RR+ RLA   A SAG A     S    +      V +EL  Y+AE    EE  FSL  FW+
Sbjct:   52 LNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF------------AEADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVS----TARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQ 393          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.250e-71
Identity = 167/358 (46.65%), Postives = 210/358 (58.66%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKP-QVDPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLAT--AGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFWR 1066
            LN+V +W LGI G++ T  N  ME LM++LAA VG FSHSAVNN ELK +Q L  +   IYE IRRNDTRW +Q  MM RLL LK AIV+YFR + ++ R+LS RE +VTNEVCS+LD VAEVT+K+ GA +T+ISQ  F M E+ +I      +IR PD+P   D V  + I+  DL  E     +V +  M KK LG    P+ERI  LLDPRRK  S +  VNGS D+K  AI ++ +VA  F            A         XXXXXXXX      +P  KK +VLS +E+RR+ RLA   A SAG A     S    +      V +EL  Y+AE    EE  FSL  FW+
Sbjct:  380 LNSVTMWALGINGSIRTGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQGATDTHISQTMFNMREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF------------AEADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVS----TARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQ 721          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.040e-67
Identity = 143/358 (39.94%), Postives = 207/358 (57.82%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKPQV----DPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFW 1063
            LNT VVW LGI G      N  M  LM+KLAA VG FSHSAVNN ELK LQ L    S+IYE +RRNDTRWT+Q  MM R+L LK  I +YF+ +  ++R+L+  E ++TNEVCS+L  V+EVTI++ G+ +T++ QA F++ EL++++G  +  IR P+   +    + +P DD +  DL  E Q  ++V  E M +K +G     VER+  L+DPRRK++   +  NGS D+++ A D+L  V   FD         PA                        EP  KK + LS +E+RR  R+A A + G     +E  S PS T +V + +E+  Y+AE  +L+ +GF++ G+W
Sbjct:  392 LNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGMGSAQVAVERLSALMDPRRKSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNLDP----------------VEPAPKKKK-LSRLEERRAARVAAATTGGDETGSLEDQS-PSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYW 729          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 3.900e-66
Identity = 140/358 (39.11%), Postives = 205/358 (57.26%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKPQV----DPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFW 1063
            LNT VVW LGI G      N  M  LM+KLAA VG FSHSAVNN ELK LQ L    S+IYE +R NDTRWT+Q  MM R+L LK  I +YF+ +  ++R+L+  E ++TNEVCS+L  V+EVTI++ G+ +T++ QA F++ EL++++G  +  IR P+   +    + +P DD +  DL  E Q  ++V  E M +K +G     VER+  L+DPR +++   +  NGS D+++ A D+L  V   FD         PA                        EP  KK + LS +E+RR  R+A A + G     +E  S PS T +V + +E+  Y+AE  +L+ +GF++ G+W
Sbjct:  197 LNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRMQGSVDTHVGQAMFILHELIEMLGEDTHPIRQPNATVMPLPPEGIPTDDTQVMDLTAEAQCVLEVLQEKMREKGVGSAQVAVERLSALMDPRLRSLDSDQLENGSADLRKKAEDDLKAVIAKFDVGPATAAPAPAPVMNLDR----------------VEPAPKKKK-LSRLEERRAARVAAATTGGDETGSLEDQS-PSTTRRVLIEREVLVYLAENPQLDVDGFNVLGYW 534          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.140e-60
Identity = 135/356 (37.92%), Postives = 205/356 (57.58%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKPQVDPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFD--GSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFW 1063
            +NT V+W LGI G  N  RNK M  LM+KLAA VG FSHSAVNN +LK LQ L      +Y+ IRRNDTRWT+Q  MM RLL LK  I +YFR    + R+L+  E ++TNEVCS+L  V+EVTI++ GA++T+ISQA F++ E+++++   S  IR  +  + +     +++  +L    Q  ++V ++ M +K +G+    VER+  L+DPRRK++   +  NGS  +++ A ++L  V   FD   SEP     P  +                      EP +K+ + LS +E+RR  R+A A   G +G     GS  +   +V + +E+  Y+AE  ++E + F++ GFW
Sbjct:  390 VNTAVLWALGIAG--NGRRNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQGAKDTHISQAMFIIHEVMEMLREDSHPIRAQNATEPE-----EMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQFDVQPSEPAPAPAPVLNVDP------------------VEPASKRKK-LSRLEERRAARVAAASDGGASGSVQAQGS--ATNRRVLIEREVLVYLAETEQVEVDDFNVLGFW 717          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.260e-55
Identity = 137/382 (35.86%), Postives = 190/382 (49.74%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASD-------KRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIR------TPDKPQVDPVPYD---------------DIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFW 1063
            +N+ V+W LGI G+V T +NKPM+    KLAA VG FSHSAVNN  LK LQ L     +IYE IRRNDTRWT+Q+ MMGRLL+LK  I +YFR  A         KR+L+  E +VTNEVCS+L+ V+EVTI++ GA +T++SQATF++ E++D++ +    IR      TP  P    +P +               + + +DL  E Q  V V +E M +K +G+    VER+  LLDPRRKT+      NGS D+K  A  +L      F       T  PA                        EP  KK    S +                               +V + +E+  Y+AE  +++ + F+  GFW
Sbjct:  201 VNSAVLWALGIAGSVTTCKNKPMK----KLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATDTHLSQATFIINEVIDMLTTDYHPIRVESAIVTPPPPAAGIIPTEGEGQNESSLDGISTAETQVTDLTLEAQDVVQVLLEVMDEKGVGKALQWVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFIGKFAQESAPSTPAPAPVVNVD----------------TAEPARKKXXXTSRLXXXXXXXXXXXXXXXXXXXXXTDPKAAGAGRRVLIEREMLVYLAEQPQVDVDDFNPLGFW 562          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.870e-55
Identity = 134/361 (37.12%), Postives = 183/361 (50.69%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASD-------KRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKPQVDPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFW 1063
            +N+ V+W LGI G+  T +NKPM+    KLAA VG FSHSAVNN  LK LQ L     +IYE IRRNDTRWT+Q+ MMGRLL+LK  I +YFR  A         KR+L+  E +VTNEVCS+L+ V+EVTI++ GA ET++SQATF++ E     G G       ++  +D +  ++ + + L  E Q  V V  E M +K +G+    VER+  LLDPRRKT+      NGS D+K  A  +L      F       T  PA                        EP  KK    S +E                              +V + +E+  Y+AE  +++ + F+L GFW
Sbjct:  201 VNSAVLWALGIAGSATTCKNKPMK----KLAALVGVFSHSAVNNDMLKELQRLEADLHRIYETIRRNDTRWTSQQKMMGRLLILKKPISEYFRRLAQQNSQNKQLKRKLTAHEWTVTNEVCSLLETVSEVTIRMQGATETHLSQATFIINE-----GEGQ------NESSLDGISTEETQVTGLTLEAQDVVQVLREMMDEKGVGKALQRVERLSVLLDPRRKTLDDTHLRNGSSDLKTQAEADLKAFTGKFAQESAPSTPAPAPVVNVD----------------TAEPARKKKXPTSRLEXXXXXXXXXXXXXXXXXXGTTDPQAAGTGRRVLIEREMLVYLAEQPQVDVDDFNLLGFW 530          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.120e-53
Identity = 111/262 (42.37%), Postives = 158/262 (60.31%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRW-TTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKPQV----DPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFD-GSEPQKTTVP 769
            +NT VVW LGI       +N  M  LM+KLAA VG FSHSAVNN ELK LQ L    S+IYE +RRNDTRW T+Q  MM R L LK  I ++F+ +  + R+L+  E ++ NEVCS+L  V+E+TI+V G+ +T+I QA F++ E+++++G  +  IR P+   V    + +P DD   +DL  E    ++V ++ M KK +G      ER+  L+DPRRK +   +  NGS D+ + A D+L  V   FD G   + T  P
Sbjct:   41 VNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMVGVFSHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWWTSQLKMMDRALALKKPISEFFKKYPQNDRKLTPNEWTIINEVCSLLADVSEITIRVQGSVDTHIGQAMFIIHEVIEMLGEDTHPIRQPNATVVPVPEEGIPTDDTPVTDLTAEAPCVLEVLLDVMRKKGVGSAQVAAERLSALMDPRRKLLGSDQLENGSADLSKKAEDDLKAVIAKFDVGPSTESTAAP 300          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KZZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ1_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.060e-50
Identity = 101/240 (42.08%), Postives = 148/240 (61.67%), Query Frame = 2
Query:   68 MEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFRVHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRTPDKPQV----DPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFD-GSEPQKTTVPA 772
            M  LM+KLAA VG F+HSAVNN ELK LQ L    S+IYE +RRNDTRWT+Q  MM R L LK  I +YF+ +  ++R+L+  E ++ NEVCS+L  V+EVTI++ G+ +T+I QA F++ EL++++G  +  IR P+   V    + +P D  + +DL  E Q  ++V ++ M +K +G     VE +  L+DP  K +   +  NGS D++  A D+L  V   FD G   + T  PA
Sbjct:    1 MGTLMKKLAAMVGVFNHSAVNNDELKELQRLEEGFSRIYELLRRNDTRWTSQFKMMDRCLALKKPISEYFKKYLQNERKLTPNEWTMINEVCSLLSNVSEVTIRMQGSVDTHIGQAMFIIHELIEMLGEDTHPIRQPNATVVPVPPEGIPTDGTQVTDLTAEAQCVLEVLLDVMREKGVGSAQVAVESLSALMDPSGKLLDSDQLENGSADLRNKAEDDLKAVIAKFDVGPSTESTVAPA 240          
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 4.350e-48
Identity = 134/380 (35.26%), Postives = 185/380 (48.68%), Query Frame = 2
Query:    2 LNTVVVWMLGIGGTVNTYRNKPMEVLMRKLAACVGKFSHSAVNNSELKALQELVLQSSKIYEFIRRNDTRWTTQRNMMGRLLLLKAAIVDYFR------VHASDKRRLSVRERSVTNEVCSVLDPVAEVTIKV*GAEETYISQATFLMTELLDIMGSGSLRIRT------PDKPQVDPVPYD--------------DIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFW 1063
            +N+ VVW LGI G+  T RN  M  LM+KLAA VG FS SAVNN  LK LQ L     +IYE +RRNDT   +Q  MMGRLL LK  I +YFR       +   KR+LS  E  VTNEVCS+L  V+E+TI++ GA++T+ISQA FL+ E+++++   +  IRT      P  P +D +P +              DI   DL  E Q    V +E M +K +G+    VER+  LLDPRRK +   +  NG  D++  A  +L      F       T  PA                        EP  KK +   + E                    ++   P     V + +E+  Y+AE  +++ +GF+L GFW
Sbjct:   56 INSAVVWALGIAGSATTCRNTKMGGLMKKLAALVGVFSPSAVNNM-LKELQRLETDLHRIYELMRRNDT---SQFKMMGRLLTLKKPISEYFRRLPQIPSNKQLKRKLSSHEWIVTNEVCSLLGDVSEITIRIQGAQDTHISQAMFLIHEVMEMLKDETHPIRTANAIVTPPPPALDVIPTEEEENQPQKGGVSTEDIHVEDLTTEAQGVRKVLLEVMEEKGVGKALQRVERLSALLDPRRKDLDATQVGNGDEDLRIAAEADLKKFIATFTAESVPPTPAPAPVVDVQP----------------AEPALKKKKFSRIEEXXXXXXXXXXXXXXXXTVAPQT---PVTGRHVLIEREVLVYLAEQPQVDVDGFNLVGFW 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KAN7_9PHAE2.010e-7446.65Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE1.250e-7146.65Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE2.040e-6739.94Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JTB8_9PHAE3.900e-6639.11Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JRT6_9PHAE1.140e-6037.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE1.260e-5535.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQI6_9PHAE1.870e-5537.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAS2_9PHAE1.120e-5342.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZZ1_9PHAE1.060e-5042.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ6_9PHAE4.350e-4835.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6344contigH-elongata_contig6344:8782..10296 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1066
Cds size642
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6344.13919.1prot_H-elongata_contig6344.13919.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6344 8782..9423 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931017.7472253-CDS-H-elongata_contig6344:8781..94231622931017.7472253-CDS-H-elongata_contig6344:8781..9423Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6344 8782..9423 -
1691679664.0035014-CDS-H-elongata_contig6344:8781..94231691679664.0035014-CDS-H-elongata_contig6344:8781..9423Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6344 8782..9423 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931017.7692344-UTR-H-elongata_contig6344:9423..96371622931017.7692344-UTR-H-elongata_contig6344:9423..9637Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6344 9424..9637 -
1691679664.0164838-UTR-H-elongata_contig6344:9423..96371691679664.0164838-UTR-H-elongata_contig6344:9423..9637Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6344 9424..9637 -
1622931017.7835834-UTR-H-elongata_contig6344:10086..102961622931017.7835834-UTR-H-elongata_contig6344:10086..10296Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6344 10087..10296 -
1691679664.0356333-UTR-H-elongata_contig6344:10086..102961691679664.0356333-UTR-H-elongata_contig6344:10086..10296Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6344 10087..10296 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6344.13919.1

>prot_H-elongata_contig6344.13919.1 ID=prot_H-elongata_contig6344.13919.1|Name=mRNA_H-elongata_contig6344.13919.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
MTELLDIMGSGSLRIRTPDKPQVDPVPYDDIETSDLYYEVQTAVDVCVEY
MGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNV
ADLFDGSEPQKTTVPAASASAPAPAPASALAPAPGGDGVTEPLAKKPRVL
SVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGV
ELEEEGFSLPGFWR
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mRNA from alignment at H-elongata_contig6344:8782..10296-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6344.13919.1 ID=mRNA_H-elongata_contig6344.13919.1|Name=mRNA_H-elongata_contig6344.13919.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1515bp|location=Sequence derived from alignment at H-elongata_contig6344:8782..10296- (Himanthalia elongata Himel1 dioecious)
CTTGAACACGGTGGTAGTCTGGATGCTGGGCATCGGCGGCACCGTGAACA CGTACAGGAACAAGCCGATGGAGGTTCTGATGAGGAAACTGGCGGCGTGC GTAGGTAAATTCAGCCACTCGGCCGTCAACAACAGCGAGCTGAAGGCACT GCAAGAGCTAGTTCTTCAGTCCAGCAAAATCTACGAGTTCATCAGGCGCA ACGACACCCGGTGAGTTTGGGTTTGTTTTTTCTGTTTCCGTGTCCGCATT AGCTTACGGTCGTTAGACATATTAATATCGATACTTCGCGATTGATATTT GAAGTGCCATCCTTGCTTCGTGTTCACAATTATTCTATGTTCAATCTTGA ATGTGCAAACCTGACACCCGCGGCTGGTTGTTTTATTGTTTTGGCCGAAC CGTACTTACCGGTATGGTTTGCTTTCCAGGTTTTCTCGGTTTGTTTCTGG TGTTTCGTGCCTTTTCATTTTGTGGACTGTTGTGCTTGCCGATGTTGGGT TTAGTACAGTTCTATTTTTTCACAACATGAAAACCGGACCAGCGCAACCT CGCACCTCCATGAGAGCTATATAACCTAGTTTCACCCTTAAACATTTGTG TGTTATAGTTGGTCTAAACCATGCTTATTTTCCGCTGTTTCGTTCTTCCA TATAGACAGGTGGACCACTCAGAGGAACATGATGGGTCGCCTTCTCCTTT TGAAAGCCGCGATCGTCGACTACTTCAGGGTGCACGCTTCCGACAAGAGG AGACTGTCCGTTCGTGAGCGGTCGGTCACCAACGAGGTGTGCAGCGTGCT GGACCCTGTGGCGGAGGTCACCATCAAGGTCTAAGGAGCGGAGGAAACCT ACATCAGTCAGGCGACCTTCCTCATGACGGAACTGCTGGACATCATGGGA TCGGGGTCGCTTCGCATCCGCACGCCAGACAAACCGCAAGTGGACCCCGT TCCATACGACGACATAGAGACTTCCGATCTCTACTATGAGGTGCAGACAG CGGTGGACGTGTGTGTGGAGTACATGGGCAAGAAGAACCTGGGGGAGGTG GGCAACCCTGTGGAGCGCATCAGAACTCTGCTGGACCCGCGGCGGAAAAC CGTGTCGAAGCAAGAGTGCGTCAACGGCAGCCCTGACGTTAAACAGCTCG CAATCGACGAACTGAATAATGTGGCGGATTTGTTTGATGGCTCGGAGCCG CAAAAAACTACTGTCCCTGCGGCATCGGCCTCTGCCCCTGCCCCCGCCCC TGCGTCAGCACTAGCCCCAGCCCCTGGTGGCGACGGGGTGACGGAGCCAC TGGCGAAGAAGCCGCGGGTGCTCTCCGTTATAGAGCAGCGACGCGTCAAC AGACTGGCTACCGCTGGGAGTGCGGGTGTCGCTGGAGATGAAGTGGAGAG CGGCTCGGGGCCAAGCATCACGCACAAAGTCTCTGTTCTCCAAGAGCTGA CGAGATATGTAGCAGAAGGGGTGGAGCTGGAAGAGGAGGGATTTTCCTTG CCGGGGTTTTGGCGG
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Coding sequence (CDS) from alignment at H-elongata_contig6344:8782..10296-

>mRNA_H-elongata_contig6344.13919.1 ID=mRNA_H-elongata_contig6344.13919.1|Name=mRNA_H-elongata_contig6344.13919.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig6344:8782..10296- (Himanthalia elongata Himel1 dioecious)
ATGACGGAACTGCTGGACATCATGGGATCGGGGTCGCTTCGCATCCGCAC
GCCAGACAAACCGCAAGTGGACCCCGTTCCATACGACGACATAGAGACTT
CCGATCTCTACTATGAGGTGCAGACAGCGGTGGACGTGTGTGTGGAGTAC
ATGGGCAAGAAGAACCTGGGGGAGGTGGGCAACCCTGTGGAGCGCATCAG
AACTCTGCTGGACCCGCGGCGGAAAACCGTGTCGAAGCAAGAGTGCGTCA
ACGGCAGCCCTGACGTTAAACAGCTCGCAATCGACGAACTGAATAATGTG
GCGGATTTGTTTGATGGCTCGGAGCCGCAAAAAACTACTGTCCCTGCGGC
ATCGGCCTCTGCCCCTGCCCCCGCCCCTGCGTCAGCACTAGCCCCAGCCC
CTGGTGGCGACGGGGTGACGGAGCCACTGGCGAAGAAGCCGCGGGTGCTC
TCCGTTATAGAGCAGCGACGCGTCAACAGACTGGCTACCGCTGGGAGTGC
GGGTGTCGCTGGAGATGAAGTGGAGAGCGGCTCGGGGCCAAGCATCACGC
ACAAAGTCTCTGTTCTCCAAGAGCTGACGAGATATGTAGCAGAAGGGGTG
GAGCTGGAAGAGGAGGGATTTTCCTTGCCGGGGTTTTGGCGGATGACGGA
ACTGCTGGACATCATGGGATCGGGGTCGCTTCGCATCCGCACGCCAGACA
AACCGCAAGTGGACCCCGTTCCATACGACGACATAGAGACTTCCGATCTC
TACTATGAGGTGCAGACAGCGGTGGACGTGTGTGTGGAGTACATGGGCAA
GAAGAACCTGGGGGAGGTGGGCAACCCTGTGGAGCGCATCAGAACTCTGC
TGGACCCGCGGCGGAAAACCGTGTCGAAGCAAGAGTGCGTCAACGGCAGC
CCTGACGTTAAACAGCTCGCAATCGACGAACTGAATAATGTGGCGGATTT
GTTTGATGGCTCGGAGCCGCAAAAAACTACTGTCCCTGCGGCATCGGCCT
CTGCCCCTGCCCCCGCCCCTGCGTCAGCACTAGCCCCAGCCCCTGGTGGC
GACGGGGTGACGGAGCCACTGGCGAAGAAGCCGCGGGTGCTCTCCGTTAT
AGAGCAGCGACGCGTCAACAGACTGGCTACCGCTGGGAGTGCGGGTGTCG
CTGGAGATGAAGTGGAGAGCGGCTCGGGGCCAAGCATCACGCACAAAGTC
TCTGTTCTCCAAGAGCTGACGAGATATGTAGCAGAAGGGGTGGAGCTGGA
AGAGGAGGGATTTTCCTTGCCGGGGTTTTGGCGG
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