prot_H-elongata_contig63361.13915.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63361.13915.1
Unique Nameprot_H-elongata_contig63361.13915.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length233
Homology
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BLAST of mRNA_H-elongata_contig63361.13915.1 vs. uniprot
Match: A0A6H5LA95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA95_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.300e-20
Identity = 66/119 (55.46%), Postives = 68/119 (57.14%), Query Frame = 0 
Query:  111 AECPTDKCRDPITLDDLGSWTWDFHASEAATPPVSCGGTAAPKNGGD---MTKRSGXXXXXXXXSKGRSRPGKGKGGFRAGGADGGTISCSGGGGSSPVVTYNVESLVFYLLESGDFQV 226
            AE P D CRDPITLDDLGSWTWDF ASEAATPPVSCG T + K+GG      KR G    XXXX                               SS VVTYNVESLV YLLESGDFQV
Sbjct:  184 AERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVGGKXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXSSAVVTYNVESLVLYLLESGDFQV 296
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BLAST of mRNA_H-elongata_contig63361.13915.1 vs. uniprot
Match: D7FNR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR0_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 7.970e-19
Identity = 91/235 (38.72%), Postives = 98/235 (41.70%), Query Frame = 0 
Query:    1 MLRKGWVTREEYGQLLMGDRWE-------EEGERARLVFCRNYLTSLKKPTRPPSNVSVSREKTRQIVLYARGRGGAGGGDAVARGEQGACSRVNYSKTVGAAHASKTASTPEKKKKAECPTDKCRDPITLDDLGSWTWDFHASEAATPPVSCGGTAAPKNGGD---MTKRSGXXXXXXXXSKGRSRPGKGKGGFRAGGADGGTISCSGGGGSSPVVTYNVESLVFYLLESGDFQ 225
            ML +GWVTREEY QLL GDR         EE         RN +   +K  R      V R + R+                                                   AE P D CRDPITLDDLGSWTWDF ASEAATPPVSCG T + K+GG      KR G   XXXXX                               SS VVTYNVESLV YLLESGDFQ
Sbjct:    1 MLERGWVTREEYQQLLHGDRLYSLHESEMEEXXXXXXXXLRNKIGLRRKLWRQTQIGVVRRARARKKAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERPPDVCRDPITLDDLGSWTWDFRASEAATPPVSCGATKSTKHGGGGGWKGKRFGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SSAVVTYNVESLVLYLLESGDFQ 232
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63361.13915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LA95_9PHAE5.300e-2055.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNR0_ECTSI7.970e-1938.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63361contigH-elongata_contig63361:120..2246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63361.13915.1mRNA_H-elongata_contig63361.13915.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63361 120..2246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63361.13915.1 ID=prot_H-elongata_contig63361.13915.1|Name=mRNA_H-elongata_contig63361.13915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp
MLRKGWVTREEYGQLLMGDRWEEEGERARLVFCRNYLTSLKKPTRPPSNV
SVSREKTRQIVLYARGRGGAGGGDAVARGEQGACSRVNYSKTVGAAHASK
TASTPEKKKKAECPTDKCRDPITLDDLGSWTWDFHASEAATPPVSCGGTA
APKNGGDMTKRSGGGRAGRTGSKGRSRPGKGKGGFRAGGADGGTISCSGG
GGSSPVVTYNVESLVFYLLESGDFQVMDVFWF*
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