prot_H-elongata_contig6336.13914.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6336.13914.1
Unique Nameprot_H-elongata_contig6336.13914.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length297
Homology
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: D8LBP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP6_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.910e-33
Identity = 91/145 (62.76%), Postives = 102/145 (70.34%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGF-SRADQARVAASVASGVGFIGAGVITTAGKG--------DGRGRQSST---------DMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISRVQQSVLSKLYRVRLILGPRLVQ 127
            SLVA+GAC FT VSQ GF  +ADQARVAASVASGVGFIGAGVITT+GK         + RGR  S          D+DG+V+GLTTASAIWITAGLGMACG GLLF A +G  LTV +LKIS V  SV  K  RVR +L P+L Q
Sbjct:   63 SLVALGACTFTLVSQLGFVGKADQARVAASVASGVGFIGAGVITTSGKEASSMRESLNTRGRGGSNFPGTTVSMNDVDGEVKGLTTASAIWITAGLGMACGAGLLFIAMLGAGLTVGILKISEVTTSVQKKWARVRSVLRPKLAQ 207          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A835YXE4_9STRA (MgtC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE4_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.680e-26
Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGFSRADQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISRVQQSVLSKLYR 116
            SLVA+GA  FT VS +GFS  D  R+AA+VASGVGF+GAG IT       R  + S+D+D DVRGLTTA+AIWITAGLGMA G G+ FTA  GT +T+ VLK+S ++  +  ++ R
Sbjct:   16 SLVALGAATFTIVSAYGFSSGDPGRIAANVASGVGFLGAGTITH----PKRYIKGSSDIDSDVRGLTTAAAIWITAGLGMAAGAGMFFTAIAGTVITITVLKMSNLKSVMFRRVSR 127          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A835YH54_9STRA (MgtC/SapB/SrpB transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH54_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.010e-24
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGFSRADQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISRVQ 107
            +LV++GA  FT VS +GFS  D  RVAA+VASGVGF+GAG IT   K      Q S+++D DVRGLTTA+AIWI AGLGM+ G G+ FTA  GTA+T+ VL++  ++
Sbjct:   16 ALVSLGAATFTLVSAYGFSGGDPGRVAANVASGVGFLGAGTITHPKKRV----QGSSEVDADVRGLTTAAAIWIAAGLGMSAGAGMYFTAVCGTAITMVVLRLGDIR 118          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A1E7FEZ8_9STRA (MgtC/SapB transporter (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEZ8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 7.210e-16
Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGFS---RADQARVAASVASGVGFIGAGVITTAG-KGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLK 102
            SLV++GAC FT  S +GFS   R D +R+A++VASGVGFIGAGVITT+    DG+ R  S   +  V GLTTA+ IW++A +G++CG GLL  AT     T+ +L+
Sbjct:   56 SLVSMGACCFTICSCYGFSNFARVDVSRMASNVASGVGFIGAGVITTSVINKDGQSR--SNPQNNIVHGLTTAATIWLSAAVGVSCGVGLLRIATTAAFATICILR 159          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A7V2KRP3_9CHLR (MgtC/SapB family protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7V2KRP3_9CHLR)

HSP 1 Score: 80.5 bits (197), Expect = 3.180e-15
Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 0
Query:    2 LVAIGACIFTSVSQFGFSRADQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISR 105
            L+  GA +FT VS +GF   DQARVAA + +G+GF+GAG I          R+S    +G V+GLTTA+ IW+TAG+GMA G+G+   A+V T   +A+L + R
Sbjct:   33 LICAGAALFTVVSIYGFGVTDQARVAAGIVTGIGFLGAGAII---------RRS----EGGVKGLTTAATIWVTAGIGMAAGSGMYVIASVTTLFVLAILLLPR 123          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A7S2MLU6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MLU6_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.470e-15
Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGF---------SRADQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISRVQQSVLSK 113
            +LV++GAC FT  S FGF         ++ D +R+A++VASGVGFIGAGVIT   K  G       D    V GLTTA+AIW+ A +G+A G GL   A    A T+A+L+ S+++ + +SK
Sbjct:   73 ALVSLGACAFTLCSMFGFLAVAASSSAAKLDPSRMASNVASGVGFIGAGVITNNRKSSG-----VYDRQSSVNGLTTAAAIWVAAAVGVASGVGLYVVAATAAASTIAILRFSKLKNTAISK 189          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A448Z6J1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6J1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 4.130e-15
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGFS---RADQARVAASVASGVGFIGAGVITTA----GKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISR 105
            SLV++GA IFT  S +GF+   + D +R+AA+VASGVGF+GAGVITT+     KGD  G    +++   V GLTTA+ IW++A +G++CG GLL  AT   A T+ +L++ R
Sbjct:  215 SLVSMGAAIFTVCSCYGFTNFPKVDASRMAANVASGVGFVGAGVITTSIHKPNKGDASGNLYQSNV---VHGLTTAATIWLSAAVGVSCGVGLLRVATTAAAATIFILRMGR 323          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: UPI001E2F04C1 (MgtC/SapB family protein n=1 Tax=Prevotella TaxID=838 RepID=UPI001E2F04C1)

HSP 1 Score: 81.3 bits (199), Expect = 6.890e-15
Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    2 LVAIGACIFTSVSQFGFSRA--DQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTAL 96
            LVA+G+ +FT +SQ+GFS A  D +RVAA V SG+GF+GAG+I                    VRGLTTA+ +W+TA +GMACGTG+   A V TAL
Sbjct:   33 LVAMGSALFTIISQYGFSEALKDSSRVAAQVVSGIGFLGAGIIIF--------------QKNMVRGLTTAAGLWVTAAIGMACGTGMYLVAAVTTAL 115          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A7S1CXC0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXC0_CYCTE)

HSP 1 Score: 79.7 bits (195), Expect = 3.890e-14
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    1 SLVAIGACIFTSVSQFGF-SRADQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVLKISRV 106
            SLV++GA  FT  S +GF  R D +R+A+SVASGVGFIGAGVITT+ K        S ++   V GLTTA+AIW++A +G+A G GL   A    ++TV++L++ R+
Sbjct:   68 SLVSLGAATFTICSMYGFVGRWDTSRMASSVASGVGFIGAGVITTSNK-------YSKNV---VHGLTTAAAIWLSAAVGVASGAGLHIIAVCAASITVSILRLGRI 164          
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Match: A0A349CIR8_9CHLR (Magnesium transporter MgtC n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A349CIR8_9CHLR)

HSP 1 Score: 77.0 bits (188), Expect = 7.900e-14
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    2 LVAIGACIFTSVSQFGFSRADQARVAASVASGVGFIGAGVITTAGKGDGRGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAVL 101
            L+  GA +FT VS +GF   DQARVAA + +G+GF+GAGVI          R+  +++   V+GLTTA+ IWITAG+GMA G+G+   A   T +   VL
Sbjct:   39 LICSGAALFTVVSAYGFGITDQARVAAGIVTGIGFLGAGVIL---------RRDDSNV---VKGLTTAATIWITAGIGMAAGSGMYILAVATTVMVFLVL 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6336.13914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBP6_ECTSI1.910e-3362.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YXE4_9STRA2.680e-2656.03MgtC family-domain-containing protein n=1 Tax=Trib... [more]
A0A835YH54_9STRA5.010e-2456.07MgtC/SapB/SrpB transporter n=1 Tax=Tribonema minus... [more]
A0A1E7FEZ8_9STRA7.210e-1650.94MgtC/SapB transporter (Fragment) n=1 Tax=Fragilari... [more]
A0A7V2KRP3_9CHLR3.180e-1546.15MgtC/SapB family protein n=1 Tax=Dehalococcoidia b... [more]
A0A7S2MLU6_9STRA3.470e-1544.26Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A448Z6J1_9STRA4.130e-1548.21Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
UPI001E2F04C16.890e-1549.48MgtC/SapB family protein n=1 Tax=Prevotella TaxID=... [more]
A0A7S1CXC0_CYCTE3.890e-1448.60Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A349CIR8_9CHLR7.900e-1446.00Magnesium transporter MgtC n=1 Tax=Dehalococcoidia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003416MgtC/SapB/SrpB/YhiD familyPFAMPF02308MgtCcoord: 2..105
e-value: 2.7E-19
score: 69.7
IPR003416MgtC/SapB/SrpB/YhiD familyPANTHERPTHR33778FAMILY NOT NAMEDcoord: 2..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..297
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6336contigH-elongata_contig6336:5234..7379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6336.13914.1mRNA_H-elongata_contig6336.13914.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6336 5234..7379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6336.13914.1 ID=prot_H-elongata_contig6336.13914.1|Name=mRNA_H-elongata_contig6336.13914.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
SLVAIGACIFTSVSQFGFSRADQARVAASVASGVGFIGAGVITTAGKGDG
RGRQSSTDMDGDVRGLTTASAIWITAGLGMACGTGLLFTATVGTALTVAV
LKISRVQQSVLSKLYRVRLILGPRLVQTTASPTPVATVTAAELNERQDIV
PVDKENSNSDRGNTEKANDEETTPEARDRESRRESYVDVVEAAPGHTVKA
NALETIKRATDPGDDAPLPFEERYRVGDEMGEDEDDSDFVDAKDIRDTYH
DDPFFGGTWPGVPPKVRPWVADESSPTPATIRTARKRSRVISSRRQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003416MgtC/SapB/SrpB/YhiD_fam