mRNA_H-elongata_contig11798.1391.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11798.1391.1
Unique NamemRNA_H-elongata_contig11798.1391.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 549 bits (1414), Expect = 6.350e-174
Identity = 334/810 (41.23%), Postives = 441/810 (54.44%), Query Frame = 1
Query:    1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDI-----------------------------------TDVARIEAALVWLIANNPAYRD-VRMDISRIAH-LGDKE------VNVIHLFDTIPADDEE-----------------------------------------------EGDGDAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNST---TVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDP------AARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAGG----------------------SDAD---------GGVVDMEYEHVQDEIIEFLRDIGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDE-------GFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
            KFG  N+T+P  VP  +++L M E  +IARA PVVK+ R  GG   YEGH +S+ QDI                                    ++AR+E AL++LI ++PAYR  V +D++R+   LG  E      V+V+HLF TI  D+ E                                               E D  A D  G    R R  +GP ESF+ +      SEED +R AL  +T   G++    +  YPR   P+RED TP L +MCFPTLFP G G+ F  A +R VS +  + HL+KF D         P YRFA H TF YW L++R+  QAK+Q RVFL  +   V L    V +  I QL+  A R+ AN+ GTDGYW+   GKLE++++ +   + F TYSAA+HHW+D+  L P  G EP PG+       A R R LIDNPH+ADWW+W+RM   +E+FLG  + DA W WMRAEW++RASLH+HG   W C G                        + D         GGV D E+  VQ++I+ FL  +G+TA NP+  A++ PV ++A  R REEL R MRDF W D    +RRY NL N +QRHTKCG YCL+NG CRFGFPK+R+   R+D H L    T+   D+ V+VTPPN S         G C+  VNRH + QLLAWG N D SPIV+H  A  YMVKY SKGE  S+EA+++L  LVR +   +     RLSL QI+R+++N  TTRRDMG QE+MH+ +Q P V  ++EF+
Sbjct:  110 KFGEVNRTVPPPVPGYMQNLTMTEEMLIARASPVVKVVRLAGGMHGYEGHVLSMGQDIGEFATRLPWLPTSEEIPVVIVQPPEGGSWAGRNFKVNLARVEGALLYLIRHSPAYRGIVHIDMARLRERLGGLERDENVDVDVMHLFHTITDDNAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRRPRSRVCGVEIAPNLLELDDIADDPEGASELRARPRRGPTESFVKSANVRQQSEEDALREALMDITGYRGDAAGEASFEYPRRTGPVRED-TPWLGSMCFPTLFPKGVGDPFGDAGMRSVSFVHFIAHLMKFVDRPEGRA---PHYRFASHRTFRYWALDVRLRRQAKQQCRVFLRNHEGLVNLDPTDVDDGTISQLMRIALRYVANVPGTDGYWMRWQGKLEDSLNQLQSLTTFTTYSAANHHWYDLFRLMPASGPEPAPGEGGLIRPVAERTRPLIDNPHLADWWIWERMHKLDEIFLGNAMADASWFWMRAEWQSRASLHIHGMSSWNCEGDRRVTELSRTYLRVYIARRRRATEEPDXXXXXXXXXGGVPD-EFVRVQEDIVRFLEKVGFTARNPSLPADDTPVGEEACARSREELERYMRDFPWHDVDECRRRYANLVNGAQRHTKCGPYCLRNGRCRFGFPKKRDGRMRLDPHPLTGNPTDDPNDYHVVVTPPNASPPAEGQRGPGPCNRSVNRHVQSQLLAWGANTDFSPIVDHGGAATYMVKYASKGECSSKEARKMLLTLVRDAADQLPDGPERLSLPQIMRKIINCATTRRDMGFQEVMHMNLQIPMVFKNVEFV 914          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 541 bits (1395), Expect = 7.490e-173
Identity = 325/777 (41.83%), Postives = 431/777 (55.47%), Query Frame = 1
Query:    1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDI-----------------------------------TDVARIEAALVWLIANNPAYRDVR--MDISRIA-HLGDK------EVNVIHLFDTIPADDEEEGDGDAGDSSGDPPERQRDYQG------------PRESFIPADAPGGLSEEDDIRRALQSLTQ----GGGNSTTVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAA-------RHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAG------------------------GSD--ADGGVVDMEYEHVQDEIIEFLRDIGYTATN----PAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNV-------SDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
            KF VEN T+P  VP  L+ L M E  MI+ A PV K+ R  GG   Y+GH +S+ QDI                                     + R++ AL +L+ ++P Y D+R  +D+ R+  HL D+      E++V+ LF T+  +    G GD         E  RDY+G             ++SFIP    G  SE + +R+ L+ +T     G   + T+ YP    PLRED TP L +MCFPTLFP G G+       R ++ +D +THL+KF D   +G  E P YRFA H TF YW L++R+   A+ + R+FL  N     L    V +  I+QL+  ATR+ AN+ GTDGYW    GKLE+ +D +   S F TYSAADHH  D++ L P  G EP  G  A        R+R LI NPHIADWW+W+RM+VF + FLG D+ +A W W RAEW++R++LHVHGC  W C G                        G D   DGGV D +   V+D I  FL  IG+TA N    P  +  +VP  ++AR RGR+ELARD+R FDW D    +RRY+NL NA  RHT+ G YCL NG CRFGFPK R E+  ++ H L  P T+ ++DWQ+I TP N          EG  D  VNRH   QLL WG NVD SPIV+  MA +YMVKY +KGESRSR+ Q  L  LVR +  +   D++RL+L  I+R+VLN  TTRRDMG QE+ HL +QT +V H++E++
Sbjct:    6 KFSVENGTVPNPVPDELRSLTMSEEMMISMAFPVCKVIRLAGGAHGYKGHVLSIGQDIGGFVGTLPWLPNSDEMPVIIIQPPDGGSWAGRQFKVSLERVQRALNYLMLHSPPYMDIRSRIDMDRVRRHLQDEPREDGGEIDVMRLFHTVTEEPPNPGGGDGXXXXEGNGEGARDYRGIEPMPDPVEHEERQQSFIPMPGDGRQSEAEILRQQLEHMTNYTDNGQSGAATMQYPGREAPLRED-TPWLWSMCFPTLFPDGVGDT-SQPHQRTLTDVDIVTHLMKFVDRP-EG--EAPYYRFASHRTFRYWALDMRLRKTARLRCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSGDGEDPPGDGGVGDEDMSRVKDGISSFLCGIGFTALNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRSRDVQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYV 777          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 399 bits (1024), Expect = 3.270e-123
Identity = 216/465 (46.45%), Postives = 279/465 (60.00%), Query Frame = 1
Query:  757 IRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAA-------RHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAG------------------------GSD--ADGGVVDMEYEHVQDEIIEFLRDIGYTATN----PAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNV-------SDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
            +R+   A+ + R+FL  N     L    V +  I+QL+  ATR+ AN+ GTDGYW    GKLE+ +D +   S F TYSAADHH  D++ L P  G EP  G  A        R+R LI NPHI DWW+W+RM+VF + FLG D+ +A W W RAEW++R++LHVHGC  W C G                        G D   DGGV D +   V+D I  FL  IG+TA N    P  +  +VP  ++AR RGR+ELARD+R FDW D    +RRY+NL NA  RHT+ G YCL NG CRFGFPK R E+  ++ H L  P T+ ++DWQ+I TP N          EG  D  VNRH   QLL WG NVD SPIV+  MA +YMVKY +KGESRSR+ Q  L  LVR +  +   D++RL+L  I+R+VLN  TTRRDMG QE+ HL +QT +V H++E++
Sbjct:    1 MRLRKTARLRCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRYVANVPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIEDWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSRDGEDPPGDGGVSDEDMSRVKDGISSFLCGIGFTALNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRSRDVQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYV 465          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 3.190e-114
Identity = 227/613 (37.03%), Postives = 309/613 (50.41%), Query Frame = 1
Query:    1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVAR-----------------------------------IEAALVWLIANNPAYRDVRMDISRIAHLG----DKEVNVIHLFDTIPADDEEEGDGDAGDSSGDPPER--QRDYQ----------------------------GPRESFIPADAPGGLSEEDDIRRALQSLT---QGGGNSTTVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPC-YRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGER---EIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFP-IVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--WCAG-------------------------------GSDADGGVVDMEYEHVQDEIIEFLRDIGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTK 1509
            KFG  N  IP D+   L  L ++E Q+I+ AHP+ + YR PGG+  Y GH +++++D+T  A                                    +E AL WLIANNPAY  VR+DI  +  LG    D E + ++ F  +       G G              +RDY+                             PRESFIP D  G   +ED++R  L+ L     GG  S  V++PR  +PL E  TP LAT CFP LFP GA +   GAR R V  +D +THL+KF D     V+EE   YRF  H  FAYWC++ ++ SQA+ Q R+F+N N    ++ +  V +     +Q ++   +R+TAN+ GTDG+W    G+LE AVD +   + F TYSAADHHW+D+H L P    D+     P  R + LIDNPH+ADWW W+R++ +  VFLG D+ D +W W RAEW++RASLHVHGC  W                                  G+  DGGV D E+  VQ E+  FL  +G+TA NP   A +  V ++ R+   E +ARDMRDF W D +A   RY  L NA QR+T+
Sbjct:   25 KFGSGNSMIPDDLVPQLMGLTVLEQQLISMAHPIARAYRLPGGQCAYSGHILNVARDVTTFATSLPWQANSDDIPIIVIVPPGGGTWQGREFKALKNCVEIALNWLIANNPAYSSVRIDIENLDRLGRENDDTEHDHVNNFLRLRKAGPPHGAGXXXXXXXXXXXXXTRRDYRYIGAPFPARPDDDVTDPLQAAGGRTTSNTPRESFIPTDGTGETPQEDEVRACLERLAARRDGGDASARVHHPRQLDPLPEHQTPFLATKCFPCLFPRGAADPTSGARRRGVDFVDHVTHLLKFVD----AVEEERYHYRFVSHRLFAYWCMDTKVRSQARTQCRMFMNNNPHIAQMSVDEVFDNIWDNVQGIMTHMSRYTANLPGTDGFWQKEQGRLENAVDQLQSLTVFTTYSAADHHWYDLHRLMPGYKEDDDDKPTPQQRTQWLIDNPHLADWWFWQRLQEWKGVFLGRDMGDQRWQWDRAEWQSRASLHVHGCSSWIVEAVRNKHLTDLSRRYLKGFLARRRVKQGRLEEGAPTDGGVSDEEFARVQQEMCTFLVAVGFTARNPDPPAPDEAVSEEQRRAAAEGIARDMRDFPWEDEQATMERYSLLLNACQRYTR 633          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6H5KCP2_9PHAE (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP2_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 3.050e-98
Identity = 219/560 (39.11%), Postives = 283/560 (50.54%), Query Frame = 1
Query:  316 PADDEEEGDG--DAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGN----STTVNYPRAGEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRW--------TANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAA-------RHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--W-CAG------------------------GSD--ADGGVVDMEYEHVQDEIIEFLRDIGYTATN----PAASAEEVPVDDQARQRGREELARDMRDFDWTD----NKAY-------------------------------------------------------QRRYENLFNASQRHTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPN 1656
            P + E+EGD   D  D+SG      R  +GP ESFIP    G  SE + +R+ L+ +T    N    + T+ YP    PLRED TP L +MCFPTLFP G G+       R ++ +D +THL+KF D   +G  E P YRFA H TF YW +++R+   A+ Q R+FL  N     L    V +  I+QL+  ATR+        T    GTDGYW    GKLE+ +D +   S F TYSAADHH  D++ L    G EP  G  A        R+R LI NPHIADWW+W+RM+VF + FLG D+ +A W W RAEW+ R++LHVHGC  W C G                        G D   DGGV D +   V+D I  FL  IG+TA N    P  +  +VP  ++AR RGR+ELARD+R FDW D     + Y                                                       +RRY+NL NA  RHT+ G YCL NG CRFGFPK R E+  ++ H L  P T+ ++DWQ+I TP N
Sbjct:  448 PLEHEDEGDNVRDPEDASG---LAARPQRGPAESFIPMPGDGRQSEAEILRQQLEHMTNYTDNEQSGAATMQYPGQEAPLRED-TPWLWSMCFPTLFPDGVGDT-SQPHQRTLTDVDIVTHLMKFVDRP-EG--EAPYYRFASHRTFRYWSVDMRLRKTARLQCRIFLRNNPALTSLDPSEVNDDTIRQLMSVATRFRLCRRSPPTPPXPGTDGYWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMLRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQIRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSRDGEDPPGDGGVSDEDMSRVKDGISSFLCGIGFTAVNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHIRHGGCCLVNGRCRFGFPKPRQXELAREELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQN 999          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8)

HSP 1 Score: 275 bits (702), Expect = 2.270e-75
Identity = 221/738 (29.95%), Postives = 341/738 (46.21%), Query Frame = 1
Query:    1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIHLFDTIPADDE---EEGDGDAGDSSGDPPE-RQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGE----REIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGD-EPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCWCAGGSDADGGVVDM-------------EYEHVQDEIIEFLRDI------GYTAT------------NPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCGR-YCL------KNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
            KF VEN+ IP  VP  L+ L+ VE  +IARA P++++Y KPGG+R Y GH I+L Q+I ++A                                ++  AL WLI NNP Y DV++D   +  L +  V    L  T+  +DE   +  + D G  + +P E R  +      SF+P        +E ++    Q L+        +++P    +PL E  TP LATM FPTLFP G G+    A +R V+L+D + HLIKFA+     ++ +  YRFA H  F+YW  N+    +  EQT +FL +N  +  L +  + E     +    +   +R+ ANI+GT+ YW      L+  V  +  P+ F T+S+AD HW ++HCLF    D E    D   R +++I NPHI DW+  +R++ F + +L  D  DAKW W R E++ R S+H HG         D G+ D+             + E+V ++  +  +DI        TA             NP      +  D    QR  +++     D D+ D          L N  QRHT+C   YCL      K   CRF FP +     +I+   +    +N  +    IVT  N       D+ +N + + QL  W  N D   +++H    +Y+ KY +KGE RS         + +A +++V    +  +  + +++V+      RD   QE MH L+
Sbjct:  627 KFSVENEMIPSPVPPQLQGLSQVEEMLIARALPIMRVYIKPGGQRGYSGHCINLPQNIKELALSLPRYPKDLSVIIVKVKGRNDSYKDVNVRRQKVTDALTWLIQNNPHYSDVQIDCIALNTLPENAVPSDLL--TVETEDEFVSDNNEPDLGPPTDNPCEDRVYNESNDMNSFLPVSQ----QQEQEVEAVRQQLS----GDEPMSWPNVEDQPLNEYQTPFLATMAFPTLFPDGKGDPTNQALIRDVTLLDRVRHLIKFAE----SINGKWVYRFASHPRFSYWAFNMIQRKRTLEQTGIFLKQNPSEAHLTIDELREMAESNDSALFLSKVSRYVANIAGTNAYWHKVKEDLKAIVTSVGTPTFFFTFSSADMHWPELHCLFHDRADLELSSQD---RRQNVICNPHIVDWFFTQRLESFVKYWL-YDTLDAKWHWYRFEYQGRGSIHCHG---TAKLKNDPGLCDLTKIALKGYLAQKFKDENVVEDSTQLNQDIVAGNEAAQTACKYVDWLLSTMNPNPPDENMWIRPDMHPCQRQYKDIPEWDMDSDYVD----------LLNMVQRHTRCSTSYCLRKKSSEKELKCRFHFPYDHCTQTKIEFEKVHSKHSNDEQYRARIVTKRN-------DSRLNNNQQLQLQGWRANCDIQVVIDHYACVEYLTKYAAKGEPRS-------PLIKQAFLSIVLNANSTSNPHKAIKKVVMKTLGERDYAAQETMHHLL 1319          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD)

HSP 1 Score: 266 bits (680), Expect = 1.190e-72
Identity = 212/729 (29.08%), Postives = 327/729 (44.86%), Query Frame = 1
Query:   25 IPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIHLFDTIPADDEEEGDGDAGDSSGDPP------ERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPM----GLVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCWCAGGSDADGGVVDMEYEHVQDEIIEFLRDIGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWT-----------------DNKAYQRRYENL------------FNASQRHTKCG-RYCLKNGH------CRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
            IP  VP  L+ L+ VE  +IARA P++++Y KPGG+R Y GH I+L Q++ ++A                                ++  AL WLI NNP Y DV++D   +  L D +V     +D +    +E  D +  D    PP      +R  +      SF+P     G  +E +I    Q L         +++P    +PL E  TP LATM FPTLFP G G+    A  R VSL+D + HLIKFA+     V+ +  YRFA H  F+YW LN+    +  EQT +FL +N  +  L +    G+         +   +R+ ANI+GT+ YW      L+  V  +  P+ F T+S+AD HW ++H LF              R +++IDNPH+ DW+  +R++ F + +L  D  DAKW W R E++ R S+H HG       + D G+ D+    ++  + +  +D      N    + E+  D +A   G E      +  DW                  D    QR+Y ++             N  QRHT+C   YCL+         CRF FP +     +I+   +    +N  +    IV   N       D+ +N +   QL  W  N D   I++H    +Y+ KY +KGE RS   ++          ++V+  +N  +  + +++V+      RD   QE MH L+
Sbjct:    2 IPSPVPPQLQGLSQVEEMLIARALPIMRVYIKPGGQRGYSGHCINLPQNVKELALRLPRYSKDLSVIIVKVKGRNDTFKDVNVQRQKVHDALTWLIQNNPHYSDVQIDQEALNALPDNDVP----YDLLTVQTDETSDNNEPDLG--PPTDNHSEDRVYNESTDMSSFLPI----GEEQEQEIDAVRQQLL----GDEPMSWPTVEDQPLNEYQTPFLATMAFPTLFPDGKGDPTNQALARDVSLLDRVRHLIKFAEK----VNGKWVYRFASHPRFSYWALNMIQRKRTLEQTGIFLKQNPSESHLTIDELRGMAESNSSAVFMPKVSRYVANIAGTNAYWHKVKEDLKAIVTNVGTPTFFFTFSSADMHWPELHSLF--YDGNVSELSSQDRRQNVIDNPHLVDWFFTQRLESFIKYWLH-DTLDAKWHWYRFEYQGRGSIHCHG---TAKLNNDPGLCDLTKVALKGYLAQKFKD-----ENTVEDSTELDQDIEA---GNEATQTACKYVDWLLSTMNPNPPDEEMWIRPDVHPCQRQYNDIPEWDMDSDYVDILNMVQRHTRCSTNYCLRKKSSENELKCRFHFPFDHCSQTKIEFEKVNSKSSNEQQYRAKIVMKRN-------DSRLNNNQRLQLQGWRANCDIQVIIDHYACVEYLTKYAAKGEPRSPMLKQTFN-------SIVKNADNSSNPHKAIKKVVMKTLGERDYAAQETMHHLL 684          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6S7J0R9_PARCT (Helitron_like_N domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J0R9_PARCT)

HSP 1 Score: 259 bits (663), Expect = 4.750e-72
Identity = 224/739 (30.31%), Postives = 335/739 (45.33%), Query Frame = 1
Query:   25 IPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVAR--------------------------------IEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVI-HLFDTIPAD-DEEEGDGDAGDSSGDPPERQR--------------DYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRAGE-PLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGA----ATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCW-----------------------CAGGSDADGGVVDMEYEH-VQDEIIEFLRDIGYT--ATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCG-RYCLK------NGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQV---IVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
            IP  VP+ L+ L  +E  +IARA P++K+Y KPGG+R Y GH I+L Q +TD+A+                                +E AL WLI +NP Y DV++DI  +       VN I H    I  + D EE   +    SGD                    D +    SF+P      L E D I+  L            +++P  G+ PL E NTP LATM FP LFP G G+    A  R++SL + + HLIKFA+     VDE+  YRFA H  F+YW L++    +  +Q+ +FL +N E+  L +  + +       GA     +R+ +NI+G+  YW      L+  +     P+ F T+S+AD HW ++H L   +    P      R +++I+NPH+ DW+  KR++ F + +L  D  DA+W W R E++ R S+H HG                         CA  S  +  ++D+E  +    +I +++  I  T     P  +A   P     ++R      +D+ D D          Y +L N  QRHT C  +YCLK      N HCRF FP +      ++    F+ +  + +  Q    IVT  N       D  +N H   QL  W GN D   I+++    +Y+ KY +KGE RS     +L     A +  V+ D +    Q+ +++VL      RD   QE MHLL+
Sbjct:    2 IPSCVPEVLQGLTQIEEMLIARALPIMKVYIKPGGQRGYSGHCINLPQKVTDLAKSLPRCPKDIPVVVVTMKGKDNTFKDVVVRKNKVEQALQWLIKHNPHYHDVKIDIDLLDTFP---VNGIPHNLQVIETESDPEEISDEVISQSGDQNVLHETVDNICVENEDDVFDEKTETSSFLPQSINEQL-EHDAIQNRL---------GAKIDWPDVGDQPLNEYNTPFLATMAFPCLFPDGKGDPTNPALFREISLSNKIQHLIKFAEY----VDEKWIYRFASHPRFSYWALDMIQRKRMLQQSAIFLKQNPEESHLTINELRDMASNDSSGAFMSKRSRYVSNITGSSAYWYKVREDLKAIIACKGAPTIFFTFSSADMHWPELHML---LNSSVPNPTSEERRKNVINNPHLVDWFFTKRLESFLKHWL-YDTLDAEWHWYRYEFQARGSIHCHGTAKLKSDPGLCNLSEIALKGFLAEKCADTSKDENILLDIEQGNKATRQICDYVDSIVSTWNPLPPQNNAWTKPDIHPCKKR-----YQDVSDIDSD--------YADLLNTVQRHTHCSTKYCLKHSKDNENLHCRFKFPFDLCSKTSLN----FEQIHTKDKSVQYKANIVTKRN-------DPRLNNHQRIQLQGWRGNCDIQVIIDYHACIEYLCKYAAKGEPRSP----MLKDTFNAIMKNVKPDSDP---QKAMKKVLIRTFGDRDFSAQETMHLLL 688          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: UPI001CF4DE45 (uncharacterized protein LOC114960596 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4DE45)

HSP 1 Score: 261 bits (666), Expect = 1.120e-70
Identity = 212/732 (28.96%), Postives = 327/732 (44.67%), Query Frame = 1
Query:    1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEV-NVIHLFDTIPADDEEEGDGDAGDSSGDPPERQ-RDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGE----REIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGC--------WCAGGSDADGGVVDMEYEHVQDEIIEFLRDIGYTATNPAASA------------EEVPVDDQAR--------QRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCG-RYCLKNGH------CRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLM 1974
            KF  EN  IP  VP  L+ L   E  +IARA P++++Y KPGG+R Y GH I+L Q+I D+A                                ++  AL+WL  NNP Y+DV +++  + +L    + + +   +T     +E  + D G  + +P E    D      S +P     G   + ++      L+        V +P    EPL E  TP+LATM FP LFP G G+    A  R V   + + HLIKFA+     +D +  YRFA H  F+YW LN+    +  +QT +FL +N  +  L +  + E          +   +R+ ANI+GT+ YW      L+  +  +  P+ F T+S+AD HW ++H LF   GD+        R +++I+NPHI DW+  +R++ F + +L  D  DAKW W R E++ R S+H HG          C     A  G +  +Y+H  D +     D    A N AA                 P DD           QR  +++    +D D+ D          L N  QRHT+C   YCL+         CRF FP + +   R++   +    +N L+    IVT  N       D+ +N +   QL  W  N D   +++H    +Y+ KYV+KGE RS   ++    +++   A  +         + +++V+      RD   QE MH L+
Sbjct:  479 KFSKENSMIPCPVPPQLQGLTQTEEMLIARALPLMRVYIKPGGQRGYSGHCINLPQNINDLASSLPRYPKDLSVIIVSVKGKDNTFKDVNVRRQKVLDALLWLRVNNPLYKDVEINVQALEYLPINGIPSDLLTVETSDYISDEVVEPDVGPPTDNPSEDVVYDESTETSSLLPV----GEQHKQELDAIKDQLS----GKQPVPWPTLQDEPLNEYQTPYLATMAFPALFPDGKGDPTNQALRRDVPFAERIKHLIKFAE----NIDGKWVYRFASHPRFSYWALNMIQRQRTLQQTGIFLKQNPGEAHLNIDELREMAESNNSTTFMSKVSRYVANIAGTNAYWHRVKEDLKAIITNVGTPTFFFTFSSADMHWPELHALF---GDDNNTTS-EIRRQNVINNPHIVDWYFSQRLESFIKHWL-YDTLDAKWHWFRFEYQGRGSIHCHGTAKLNNDPGLCQLTELALKGYLAEKYKHEHDVVDTTKLDQDIEAGNKAAQTACQYVDWLLSTFNPNPPDDDMWIRPQVHPCQRSYKDIPEHEKDSDYID----------LLNTVQRHTRCSTNYCLRKKQNEGDLKCRFHFPFDHSPQTRLEFEKVHTK-SNELQHRAKIVTKRN-------DSRLNNNQRLQLQGWRANCDLQVVIDHYACVEYLTKYVAKGEPRSSLLKQTFNSIIQNMDATSDP-------HKAIKKVVMKTLGERDYAAQETMHHLL 1168          
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Match: A0A6S7GPZ2_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPZ2_PARCT)

HSP 1 Score: 252 bits (644), Expect = 7.610e-68
Identity = 208/737 (28.22%), Postives = 311/737 (42.20%), Query Frame = 1
Query:    1 KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGHAISLSQDITDVA--------------------------------RIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIHLFDTIPADDEEEGDGDAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEEDDIRRALQSLTQGGGNSTTVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAGNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWCLNIRMHSQAKEQTRVFLNRNSEQVELPMG----LVGEREIQQLVGAATRWTANISGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDEPPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRAEWENRASLHVHGCW---------------CAGGSDADGGVVDM---EYEHVQDEIIEFLRD-----IGYTATNPAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQRHTKCG-RYCLKN------GHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTPPNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKGESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGTQEMMHLLMQTPSVHHSLEFI 2010
            KF  EN   PG VP+ L+ L  VE  +I+R  P++++YRK GG+R Y+GH ++L QDI                                    ++  A++WL  NNP ++++ +D   I  L                                P  RQR  +             G + +D +                +++P   G  + E  T  LATM FPTLFP G G+    AR   ++L +   HL+KFA+M ADG  E   +RFA H  F YW LN++   Q   Q  V+L +      + M     +V      Q+V    R+ + + GT+ YW  R  +L   ++   CP+ F T+SAAD HW D+  L  +  DE      + R +++IDNPH+ DW+  +R++ F   +L   V DA+W W R E++ R S+H HGC                C    +++    +M   ++E +  ++I    D     I Y         EE+P DD  R       A      D  DN      Y  L N  +RHT+C   YCLK         CRFGFPK   E   +    +    T  +E    + T  N       D  +N H    L  W  NVD   IV+     +YM KY +KGE RS+ A  +L    + SV+ ++ D+    +    ++ +      RDM  QE  H+L+  P V  +  F+
Sbjct:  145 KFSAENDMDPGTVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRKHGAEDTHQDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSL--------------------------------PEMRQRQRKQ------------GAAIQDAVNEV-----------DPLDWPSTEGNLVDEVKTDGLATMAFPTLFPYGKGDPTNRARQHGITLAEAFKHLMKFAEMLADGKFE---WRFASHPRFPYWALNMKQRHQLLSQANVYLRQYPADANMTMEELKQMVNSMSANQMVNRLQRYVSKVQGTNQYWYQRLQELLALIEQKGCPTFFFTFSAADMHWPDLQRL--LQNDEG--ASRSERAQAVIDNPHLTDWFFMQRLQEFVRHWLNG-VLDAEWHWYRFEYQARGSIHCHGCAKLKNDPDIRELRYKACVAFLESETTRYEMSPDDFEFLCGDVIRQGEDAEKLLIQYVDWLVKTFNEELP-DDTWRIPDPHPSAVSATTVDNRDND-----YHRLVNTVERHTRCSPAYCLKQKRVDLLAECRFGFPKPLQEETELSLELVVGKNTKSVE--SELHTKRN-------DQRLNSHNRVMLENWRANVDLQVIVDEKACARYMAKYAAKGEPRSKSASEIL----KLSVSSLQNDDQ---VSSAFKKAMIQVAGDRDMAAQETAHMLLSLPLVGCTFSFV 796          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11798.1391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K692_9PHAE6.350e-17441.23ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE7.490e-17341.83ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KIQ7_9PHAE3.270e-12346.45ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K2R2_9PHAE3.190e-11437.03Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KCP2_9PHAE3.050e-9839.11Helitron_like_N domain-containing protein (Fragmen... [more]
UPI00109BE5C82.270e-7529.95uncharacterized protein LOC110237019 n=1 Tax=Exaip... [more]
UPI000A2A83DD1.190e-7229.08uncharacterized protein LOC110235051 n=1 Tax=Exaip... [more]
A0A6S7J0R9_PARCT4.750e-7230.31Helitron_like_N domain-containing protein n=1 Tax=... [more]
UPI001CF4DE451.120e-7028.96uncharacterized protein LOC114960596 n=1 Tax=Acrop... [more]
A0A6S7GPZ2_PARCT7.610e-6828.22ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11798contigH-elongata_contig11798:4080..6404 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score201.8
Seed ortholog evalue9.9e-49
Seed eggNOG ortholog400682.PAC_15725762
EggNOG OGs2CC8B@1,2S3BW@2759,3A3QP@33154,3C1YH@33208
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size2013
Cds size2013
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11798.1391.1prot_H-elongata_contig11798.1391.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11798 4080..6404 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929687.9197571-CDS-H-elongata_contig11798:4079..48411622929687.9197571-CDS-H-elongata_contig11798:4079..4841Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 4080..4841 -
1691679119.3231678-CDS-H-elongata_contig11798:4079..48411691679119.3231678-CDS-H-elongata_contig11798:4079..4841Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 4080..4841 -
1622929687.9397376-CDS-H-elongata_contig11798:4928..51051622929687.9397376-CDS-H-elongata_contig11798:4928..5105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 4929..5105 -
1691679119.3405654-CDS-H-elongata_contig11798:4928..51051691679119.3405654-CDS-H-elongata_contig11798:4928..5105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 4929..5105 -
1622929687.9531422-CDS-H-elongata_contig11798:5123..57981622929687.9531422-CDS-H-elongata_contig11798:5123..5798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 5124..5798 -
1691679119.349212-CDS-H-elongata_contig11798:5123..57981691679119.349212-CDS-H-elongata_contig11798:5123..5798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 5124..5798 -
1622929687.9657993-CDS-H-elongata_contig11798:5900..61201622929687.9657993-CDS-H-elongata_contig11798:5900..6120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 5901..6120 -
1691679119.3580637-CDS-H-elongata_contig11798:5900..61201691679119.3580637-CDS-H-elongata_contig11798:5900..6120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 5901..6120 -
1622929687.9774847-CDS-H-elongata_contig11798:6225..64041622929687.9774847-CDS-H-elongata_contig11798:6225..6404Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 6226..6404 -
1691679119.3671806-CDS-H-elongata_contig11798:6225..64041691679119.3671806-CDS-H-elongata_contig11798:6225..6404Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11798 6226..6404 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11798.1391.1

>prot_H-elongata_contig11798.1391.1 ID=prot_H-elongata_contig11798.1391.1|Name=mRNA_H-elongata_contig11798.1391.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=671bp
KFGVENQTIPGDVPQCLKDLAMVESQMIARAHPVVKIYRKPGGKRHYEGH
AISLSQDITDVARIEAALVWLIANNPAYRDVRMDISRIAHLGDKEVNVIH
LFDTIPADDEEEGDGDAGDSSGDPPERQRDYQGPRESFIPADAPGGLSEE
DDIRRALQSLTQGGGNSTTVNYPRAGEPLREDNTPHLATMCFPTLFPTGA
GNLFCGARLRKVSLIDTLTHLIKFADMSADGVDEEPCYRFACHCTFAYWC
LNIRMHSQAKEQTRVFLNRNSEQVELPMGLVGEREIQQLVGAATRWTANI
SGTDGYWLVRGGKLEEAVDLIDCPSAFVTYSAADHHWHDMHCLFPIVGDE
PPPGDPAARHRSLIDNPHIADWWVWKRMKVFNEVFLGADVCDAKWGWMRA
EWENRASLHVHGCWCAGGSDADGGVVDMEYEHVQDEIIEFLRDIGYTATN
PAASAEEVPVDDQARQRGREELARDMRDFDWTDNKAYQRRYENLFNASQR
HTKCGRYCLKNGHCRFGFPKERNETFRIDGHSLFDPLTNRLEDWQVIVTP
PNVSDEGFCDAHVNRHFEGQLLAWGGNVDASPIVNHDMAYKYMVKYVSKG
ESRSREAQRLLTRLVRASVAMVEGDENRLSLQQILRRVLNTCTTRRDMGT
QEMMHLLMQTPSVHHSLEFII
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mRNA from alignment at H-elongata_contig11798:4080..6404-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11798.1391.1 ID=mRNA_H-elongata_contig11798.1391.1|Name=mRNA_H-elongata_contig11798.1391.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2325bp|location=Sequence derived from alignment at H-elongata_contig11798:4080..6404- (Himanthalia elongata Himel1 dioecious)
AAGTTCGGCGTGGAGAACCAGACGATTCCGGGGGACGTCCCGCAGTGCCT CAAGGATTTGGCGATGGTGGAGTCGCAGATGATCGCACGGGCCCACCCCG TCGTGAAGATCTATCGCAAGCCTGGCGGAAAACGGCATTACGAAGGGCAT GCCATCAGCCTCTCCCAGGACATCACGGAGTTGGCGCATGCTCTCCCCTT GCGCCCCTGCACGAACGAAATTCCTATCGTCGTCATCCAGCCTTCTGACG GCGGCAGGTGGGAAGGCGGCCAATTTACCGTGAGCGTGGCTAGAATTGAA GCAGCTCTGGTTTGGCTTATCGCCAACAACCCTGCCTACAGGGACGTGAG GATGGATATATCGCGCATTGCTCATCTGGGGGACAAGGAGGTTAATGTGA TACATCTTTTCGACACGATTCCGGCGGATGACGAGGAGGAGGGCGATGGC GACGCCGGCGACAGCAGCGGTGACCCTCCAGAGAGACAGAGGGATTACCA GGGCGTCGGCGCGCCGCCTGATCCTACGTGCGAGGAGGTGCTGTGGGAGG AATATATTCGTGGACCGATGGATGCGGCGGGGCAGGAGCTGCGCCCGCGG GGGCAGCCTCGGGAGTCTTTCATCCCCGCCGATGCGCCCGGCGGCCTGTC TGAGGAGGATGACATTCGGCGGGCGTTGCAGAGTTTGACGCAAGGCGGAG GGAACTCCACGACGGTGAACTACCCGCGGGCAGGGGAGCCGCTCCGTGAG GACAACACGCCGCATTTGGCGACGATGTGTTTCCCCACTCTGTTTCCCAC CGGAGCTGGCAACCTCTTTTGCGGCGCCCGACTTCGGAAGGTTTCCCTCA TCGACACGTTGACACACCTCATCAAGTTTGCCGATATGTCGGCAGATGGG GTCGACGAGGAGCCCTGCTATCGTTTCGCGTGTCACTGCACCTTCGCATA CTGGTGCCTCAACATCAGGATGCATTCGCAGGCGAAGGAGCAGACCCGTG TGTTTCTCAACCGCAACTCGGAGCAGGTGGAGCTCCCCATGGGATTGGTT GGGGAAAGGGAGATACAGCAGCTCGTTGGAGCGGCGACGAGATGGACAGC CAACATTTCCGGCACGGACGGTTACTGGCTGGTGAGGGGGGGCAAACTGG AAGAGGCCGTTGATCTGATCGATTGCCCCTCCGCTTTCGTCACCTACTCC GCCGCAGACCACCACTGGCATGACATGCACTGTCTTTTCCCGATAGTCGG AGATGAGCCGCCACCTGGGGATCCTGCCGCTGTCCGGGACTTGGGCTAGC GCCACCGCTCTCTCATCGACAATCCCCATATCGCCGACTGGTGGGTGTGG AAGAGAATGAAGGTCTTCAACGAGGTCTTCCTTGGTGCTGACGTCTGCGA CGCCAAGTGGGGGTGGATGCGGGCGGAGTGGGAAAACCGTGCATCTCTTC ACGTACACGGTTGTTGGTGCGCTGGAGTTGAGCCCGAACCGGGTCTCACC GCGCTGTCCCGGAAGTTCCTGAGAGGCTTTATCGCGCGCCAAAACCGGCC GCTGGAAGGCGAGGGATCTGATGCCGACGGGGGCGTGGTAGACATGGAGT ACGAGCACGTCCAAGACGAAATCATCGAATTTCTTAGAGACATCGGTTAC ACAGCTACCAACCCCGCCGCGTCGGCCGAGGAGGTACCTGTCGATGACCA GGCGCGGCAGAGGGGCCGCGAGGAGCTCGCGAGGGACATGAGAGATTTTG ATTGGACGGATAACAAGGCTTACCAAAGAAGATACGAGAACCTCTTCAAC GCGAGCCAGCGACACACCAAGTGCGGGAGGTATTGCCTCAAGAATGGGCA CTGCAGATTCGGTTTCCCGAAAGAGCGCAACGAGACCTTTCGCATTGACG GGCACTCTCTATTTGATCCTCTGACGAACCGACTGGAAGACTGGCAGGTC ATTGTCACACCGCCGAACGTGTCTGATGAAGGGTTCTGCGACGCGCACGT CAACCGGCACTTCGAGGGGCAGCTGCTTGCGTGGGGAGGCAACGTCGATG CTTCGCCGATAGTCAATCACGACATGGCGTACAAGTACATGGTAAAGTAT GTCAGCAAGGGGGAGTCTCGCAGCAGAGAGGCGCAGAGACTGCTCACGCG GCTCGTTCGTGCATCCGTGGCGATGGTAGAGGGAGACGAGAACAGGCTTA GTTTGCAACAGATCCTGAGAAGGGTCCTGAATACATGCACCACACGAAGG GACATGGGTACCCAAGAGATGATGCACCTCCTCATGCAGACCCCGAGCGT TCACCACAGCCTCGAATTTATTATC
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Coding sequence (CDS) from alignment at H-elongata_contig11798:4080..6404-

>mRNA_H-elongata_contig11798.1391.1 ID=mRNA_H-elongata_contig11798.1391.1|Name=mRNA_H-elongata_contig11798.1391.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4026bp|location=Sequence derived from alignment at H-elongata_contig11798:4080..6404- (Himanthalia elongata Himel1 dioecious)
AAGTTCGGCGTGGAGAACCAGACGATTCCGGGGGACGTCCCGCAGTGCCT
CAAGGATTTGGCGATGGTGGAGTCGCAGATGATCGCACGGGCCCACCCCG
TCGTGAAGATCTATCGCAAGCCTGGCGGAAAACGGCATTACGAAGGGCAT
GCCATCAGCCTCTCCCAGGACATCACGGAAAGTTCGGCGTGGAGAACCAG
ACGATTCCGGGGGACGTCCCGCAGTGCCTCAAGGATTTGGCGATGGTGGA
GTCGCAGATGATCGCACGGGCCCACCCCGTCGTGAAGATCTATCGCAAGC
CTGGCGGAAAACGGCATTACGAAGGGCATGCCATCAGCCTCTCCCAGGAC
ATCACGGACGTGGCTAGAATTGAAGCAGCTCTGGTTTGGCTTATCGCCAA
CAACCCTGCCTACAGGGACGTGAGGATGGATATATCGCGCATTGCTCATC
TGGGGGACAAGGAGGTTAATGTGATACATCTTTTCGACACGATTCCGGCG
GATGACGAGGAGGAGGGCGATGGCGACGCCGGCGACAGCAGCGGTGACCC
TCCAGAGAGACAGAGGGATTACCAGGGCCGTGGCTAGAATTGAAGCAGCT
CTGGTTTGGCTTATCGCCAACAACCCTGCCTACAGGGACGTGAGGATGGA
TATATCGCGCATTGCTCATCTGGGGGACAAGGAGGTTAATGTGATACATC
TTTTCGACACGATTCCGGCGGATGACGAGGAGGAGGGCGATGGCGACGCC
GGCGACAGCAGCGGTGACCCTCCAGAGAGACAGAGGGATTACCAGGGCCC
TCGGGAGTCTTTCATCCCCGCCGATGCGCCCGGCGGCCTGTCTGAGGAGG
ATGACATTCGGCGGGCGTTGCAGAGTTTGACGCAAGGCGGAGGGAACTCC
ACGACGGTGAACTACCCGCGGGCAGGGGAGCCGCTCCGTGAGGACAACAC
GCCGCATTTGGCGACGATGTGTTTCCCCACTCTGTTTCCCACCGGAGCTG
GCAACCTCTTTTGCGGCGCCCGACTTCGGAAGGTTTCCCTCATCGACACG
TTGACACACCTCATCAAGTTTGCCGATATGTCGGCAGATGGGGTCGACGA
GGAGCCCTGCTATCGTTTCGCGTGTCACTGCACCTTCGCATACTGGTGCC
TCAACATCAGGATGCATTCGCAGGCGAAGGAGCAGACCCGTGTGTTTCTC
AACCGCAACTCGGAGCAGGTGGAGCTCCCCATGGGATTGGTTGGGGAAAG
GGAGATACAGCAGCTCGTTGGAGCGGCGACGAGATGGACAGCCAACATTT
CCGGCACGGACGGTTACTGGCTGGTGAGGGGGGGCAAACTGGAAGAGGCC
GTTGATCTGATCGATTGCCCCTCCGCTTTCGTCACCTACTCCGCCGCAGA
CCACCACTGGCATGACATGCACTGTCTTTTCCCGATAGTCGGAGATGAGC
CGCCACCTGGGGATCCTGCCGCTCCTCGGGAGTCTTTCATCCCCGCCGAT
GCGCCCGGCGGCCTGTCTGAGGAGGATGACATTCGGCGGGCGTTGCAGAG
TTTGACGCAAGGCGGAGGGAACTCCACGACGGTGAACTACCCGCGGGCAG
GGGAGCCGCTCCGTGAGGACAACACGCCGCATTTGGCGACGATGTGTTTC
CCCACTCTGTTTCCCACCGGAGCTGGCAACCTCTTTTGCGGCGCCCGACT
TCGGAAGGTTTCCCTCATCGACACGTTGACACACCTCATCAAGTTTGCCG
ATATGTCGGCAGATGGGGTCGACGAGGAGCCCTGCTATCGTTTCGCGTGT
CACTGCACCTTCGCATACTGGTGCCTCAACATCAGGATGCATTCGCAGGC
GAAGGAGCAGACCCGTGTGTTTCTCAACCGCAACTCGGAGCAGGTGGAGC
TCCCCATGGGATTGGTTGGGGAAAGGGAGATACAGCAGCTCGTTGGAGCG
GCGACGAGATGGACAGCCAACATTTCCGGCACGGACGGTTACTGGCTGGT
GAGGGGGGGCAAACTGGAAGAGGCCGTTGATCTGATCGATTGCCCCTCCG
CTTTCGTCACCTACTCCGCCGCAGACCACCACTGGCATGACATGCACTGT
CTTTTCCCGATAGTCGGAGATGAGCCGCCACCTGGGGATCCTGCCGCTCG
CCACCGCTCTCTCATCGACAATCCCCATATCGCCGACTGGTGGGTGTGGA
AGAGAATGAAGGTCTTCAACGAGGTCTTCCTTGGTGCTGACGTCTGCGAC
GCCAAGTGGGGGTGGATGCGGGCGGAGTGGGAAAACCGTGCATCTCTTCA
CGTACACGGTTGTTGGTGCGCTGGACGCCACCGCTCTCTCATCGACAATC
CCCATATCGCCGACTGGTGGGTGTGGAAGAGAATGAAGGTCTTCAACGAG
GTCTTCCTTGGTGCTGACGTCTGCGACGCCAAGTGGGGGTGGATGCGGGC
GGAGTGGGAAAACCGTGCATCTCTTCACGTACACGGTTGTTGGTGCGCTG
GAGGATCTGATGCCGACGGGGGCGTGGTAGACATGGAGTACGAGCACGTC
CAAGACGAAATCATCGAATTTCTTAGAGACATCGGTTACACAGCTACCAA
CCCCGCCGCGTCGGCCGAGGAGGTACCTGTCGATGACCAGGCGCGGCAGA
GGGGCCGCGAGGAGCTCGCGAGGGACATGAGAGATTTTGATTGGACGGAT
AACAAGGCTTACCAAAGAAGATACGAGAACCTCTTCAACGCGAGCCAGCG
ACACACCAAGTGCGGGAGGTATTGCCTCAAGAATGGGCACTGCAGATTCG
GTTTCCCGAAAGAGCGCAACGAGACCTTTCGCATTGACGGGCACTCTCTA
TTTGATCCTCTGACGAACCGACTGGAAGACTGGCAGGTCATTGTCACACC
GCCGAACGTGTCTGATGAAGGGTTCTGCGACGCGCACGTCAACCGGCACT
TCGAGGGGCAGCTGCTTGCGTGGGGAGGCAACGTCGATGCTTCGCCGATA
GTCAATCACGACATGGCGTACAAGTACATGGTAAAGTATGTCAGCAAGGG
GGAGTCTCGCAGCAGAGAGGCGCAGAGACTGCTCACGCGGCTCGTTCGTG
CATCCGTGGCGATGGTAGAGGGAGACGAGAACAGGCTTAGTTTGCAACAG
ATCCTGAGAAGGGTCCTGAATACATGCACCACACGAAGGGACATGGGTAC
CCAAGAGATGATGCACCTCCTCATGCAGACCCCGAGCGTTCACCACAGCC
TCGAATTTATTATCGGATCTGATGCCGACGGGGGCGTGGTAGACATGGAG
TACGAGCACGTCCAAGACGAAATCATCGAATTTCTTAGAGACATCGGTTA
CACAGCTACCAACCCCGCCGCGTCGGCCGAGGAGGTACCTGTCGATGACC
AGGCGCGGCAGAGGGGCCGCGAGGAGCTCGCGAGGGACATGAGAGATTTT
GATTGGACGGATAACAAGGCTTACCAAAGAAGATACGAGAACCTCTTCAA
CGCGAGCCAGCGACACACCAAGTGCGGGAGGTATTGCCTCAAGAATGGGC
ACTGCAGATTCGGTTTCCCGAAAGAGCGCAACGAGACCTTTCGCATTGAC
GGGCACTCTCTATTTGATCCTCTGACGAACCGACTGGAAGACTGGCAGGT
CATTGTCACACCGCCGAACGTGTCTGATGAAGGGTTCTGCGACGCGCACG
TCAACCGGCACTTCGAGGGGCAGCTGCTTGCGTGGGGAGGCAACGTCGAT
GCTTCGCCGATAGTCAATCACGACATGGCGTACAAGTACATGGTAAAGTA
TGTCAGCAAGGGGGAGTCTCGCAGCAGAGAGGCGCAGAGACTGCTCACGC
GGCTCGTTCGTGCATCCGTGGCGATGGTAGAGGGAGACGAGAACAGGCTT
AGTTTGCAACAGATCCTGAGAAGGGTCCTGAATACATGCACCACACGAAG
GGACATGGGTACCCAAGAGATGATGCACCTCCTCATGCAGACCCCGAGCG
TTCACCACAGCCTCGAATTTATTATC
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