prot_H-elongata_contig63294.13905.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63294.13905.1
Unique Nameprot_H-elongata_contig63294.13905.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length141
Homology
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BLAST of mRNA_H-elongata_contig63294.13905.1 vs. uniprot
Match: D8LSH4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH4_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.720e-13
Identity = 80/113 (70.80%), Postives = 89/113 (78.76%), Query Frame = 0 
Query:    3 PSIMINLRNHFSATPLHRAAAKGHAEVVSMLLDNGADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTPKAQGGVTPLVLAARKDE------RRGSIARGRPVSRLPRE 109
            PS ++++RNHF ATPLHRAAAKGHAEVV+ML+ NGA VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P  KAQ GVTPL+ AARK E            RGR +SRLPR+
Sbjct:  354 PSEVVDIRNHFHATPLHRAAAKGHAEVVTMLVQNGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAIKAQQGVTPLI-AARKPEGGXXXXXXXXXXRGRAMSRLPRD 465
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BLAST of mRNA_H-elongata_contig63294.13905.1 vs. uniprot
Match: A0A6H5KW23_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW23_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 2.550e-11
Identity = 72/90 (80.00%), Postives = 79/90 (87.78%), Query Frame = 0 
Query:    3 PSIMINLRNHFSATPLHRAAAKGHAEVVSMLLDNGADVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTPKAQGGVTPLVLAARKDE 92
            PS ++++RNHF ATPLHRAAAKGHAEVV+ML+ NGA VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  P  KAQ GVTPL+ AARK E
Sbjct:  337 PSEVVDIRNHFHATPLHRAAAKGHAEVVTMLVQNGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAIKAQQGVTPLI-AARKPE 425
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63294.13905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSH4_ECTSI2.720e-1370.80Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KW23_9PHAE2.550e-1180.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 62..76
score: 39.29
coord: 14..29
score: 42.43
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 46..75
e-value: 0.006
score: 25.8
coord: 13..42
e-value: 6.4E-6
score: 35.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 46..78
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 13..45
score: 15.254
NoneNo IPR availablePFAMPF13637Ank_4coord: 16..67
e-value: 4.7E-12
score: 46.2
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 13..88
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 13..88
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..97
e-value: 1.0E-29
score: 105.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..91
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..92
score: 27.664

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63294contigH-elongata_contig63294:1456..2876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63294.13905.1mRNA_H-elongata_contig63294.13905.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63294 1456..2876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63294.13905.1 ID=prot_H-elongata_contig63294.13905.1|Name=mRNA_H-elongata_contig63294.13905.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
MSPSIMINLRNHFSATPLHRAAAKGHAEVVSMLLDNGADVNARDGFFYTP
LHQACVNGAAACVKVLLKAGADPTPKAQGGVTPLVLAARKDERRGSIARG
RPVSRLPREDWKEQESERERAIERTLSRRTSTGNMLKKVFN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom