prot_H-elongata_contig63272.13904.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63272.13904.1
Unique Nameprot_H-elongata_contig63272.13904.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length170
Homology
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BLAST of mRNA_H-elongata_contig63272.13904.1 vs. uniprot
Match: A0A6H5J7P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P2_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.670e-9
Identity = 49/158 (31.01%), Postives = 68/158 (43.04%), Query Frame = 0 
Query:   25 EECAELSEGTSQFPDSIETPNIFRRNDLCRWLMKLNVGLAYCFHKDMLRKGVNEDIDPHPSLYDH------PDRPDGGSRVWIEERGWGRN---CMEPNVVLGDNPSSSWPSMGQ--------MLLEGEARTEEPPLPGEMSRRFAANAMREFNTFEH 165
            EE  + + GT +     + P +  + DLCRWL+K ++ L  CF  DML KG   D       Y        P   DGG     ++ G  RN     +P+VV  +    S P  G           L    ++ EPP PGEMS +FAA  + E +   H
Sbjct:  227 EEYIKAASGTFESCTMAKEPRLIHQKDLCRWLLKADIRLTACFSVDMLDKGAFNDGSRGVGRYARWEGDRCPPGEDGGGP---QDVGATRNPGLSAQPHVVYDEGKGGSSPMTGAGAASTPTCFSLRSFDQSTEPPPPGEMSLKFAAELLPECDLMVH 381
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63272.13904.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7P2_9PHAE2.670e-931.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63272contigH-elongata_contig63272:1170..2280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63272.13904.1mRNA_H-elongata_contig63272.13904.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63272 925..2280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63272.13904.1 ID=prot_H-elongata_contig63272.13904.1|Name=mRNA_H-elongata_contig63272.13904.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
MYMRATETFWMNPSLFDEKYSELREECAELSEGTSQFPDSIETPNIFRRN
DLCRWLMKLNVGLAYCFHKDMLRKGVNEDIDPHPSLYDHPDRPDGGSRVW
IEERGWGRNCMEPNVVLGDNPSSSWPSMGQMLLEGEARTEEPPLPGEMSR
RFAANAMREFNTFEHIASM*
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