prot_H-elongata_contig63212.13895.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63212.13895.1
Unique Nameprot_H-elongata_contig63212.13895.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 8.820e-36
Identity = 92/239 (38.49%), Postives = 116/239 (48.54%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFTVSVARVEAALVWLIANNPAYKDVRMNISRIAHLGGEEV--------NVIHLFDTIPADEEEEGDGGAGESTGVPPER-----ERDYQ---------------------GGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTR---GGGNSTMVNYPRAGEPLREDNTPHLATMCFPTLFPTGA 202
            PGGQ  Y GHI+ +++D+   A +LPW+  ++DIPI+VI PP GG+W+GR+F      VE AL WLIANNPAY  VR++I  +  LG E          N + L    P         GAG               RDY+                     GG      PRESFIP D  G   +ED++R     L     GG  S  V++PR  +PL E  TP LAT CFP LFP GA
Sbjct:   65 PGGQCAYSGHILNVARDVTTFATSLPWQANSDDIPIIVIVPPGGGTWQGREFKALKNCVEIALNWLIANNPAYSSVRIDIENLDRLGRENDDTEHDHVNNFLRLRKAGPPH-------GAGXXXXXXXXXXXXXTRRDYRYIGAPFPARPDDDVTDPLQAAGGRTTSNTPRESFIPTDGTGETPQEDEVRACLERLAARRDGGDASARVHHPRQLDPLPEHQTPFLATKCFPCLFPRGA 296          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.410e-35
Identity = 87/221 (39.37%), Postives = 121/221 (54.75%), Query Frame = 0
Query:    2 GGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFTVSVARVEAALVWLIANNPAYKDVRMNIS--RIA-HL------GGEEVNVIHLFDTIPADEEEEGDGGAGESTGVPPERERDYQGGTRPRGQP------RESFIPADAPGNLSEEDDIRRGFRSLTR----GGGNSTMVNYPRAGEPLREDNTPHLATMCFPTLFPTGAG 203
            GG   Y+GH++ + QDI     TLPW P ++++P+++IQPPDGGSW GRQF VS+ RV+ AL +L+ ++P Y D+R  I   R+  HL       G E++V+ LF T+  +    G G          E  RDY+G   P   P      ++SFIP    G  SE + +R+    +T     G   +  + YP    PLRED TP L +MCFPTLFP G G
Sbjct:   47 GGAHGYKGHVLSIGQDIGGFVGTLPWLPNSDEMPVIIIQPPDGGSWAGRQFKVSLERVQRALNYLMLHSPPYMDIRSRIDMDRVRRHLQDEPREDGGEIDVMRLFHTVTEEPPNPGGGDGXXXXEGNGEGARDYRG-IEPMPDPVEHEERQQSFIPMPGDGRQSEAEILRQQLEHMTNYTDNGQSGAATMQYPGREAPLRED-TPWLWSMCFPTLFPDGVG 265          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.720e-24
Identity = 55/113 (48.67%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    2 GGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFTVSVARVEAALVWLIANNPAYKD-VRMNISRIAH-LGGEE------VNVIHLFDTIPADEEE 106
            GG   YEGH++ + QDI E A  LPW P + +IP+V++QPP+GGSW GR F V++ARVE AL++LI ++PAY+  V ++++R+   LGG E      V+V+HLF TI  D  E
Sbjct:  151 GGMHGYEGHVLSMGQDIGEFATRLPWLPTSEEIPVVIVQPPEGGSWAGRNFKVNLARVEGALLYLIRHSPAYRGIVHIDMARLRERLGGLERDENVDVDVMHLFHTITDDNAE 263          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: UPI000F550EEB (uncharacterized protein LOC113674125 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F550EEB)

HSP 1 Score: 82.0 bits (201), Expect = 1.220e-14
Identity = 74/222 (33.33%), Postives = 105/222 (47.30%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFT-----VSVARVEAALVWLIANNPAYKDVRMNISRIAHL--GGEEVNVIHLFDT---IPADEEEEGDGGAGESTGVPPERERDYQGGTRPRGQPRESFIPA--------DAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPR-AGEPLREDNTPHLATMCFPTLFPTGAG 203
            PG QR Y GH I L QDI+ELA +LP  P   DI ++V++       KGR  T     V   +V+ AL WLI NNP Y  V MN+  +  L   G + +++ + DT   +  DE  + D  +G  + + P+ +  Y   +        SF+P         +A GNL   ++                 + +P  + +PL E  TP LATM FPTLFP G G
Sbjct:  295 PGAQRGYSGHCINLPQDIKELASSLPRYP--KDIALIVVKV------KGRNNTFKDVKVRKEKVQNALQWLIENNPHYAGVDMNLEALNSLPENGVQADILTV-DTDAVVLPDENAKPDSSSGPCS-LNPDEDVVYNSSSE-----MSSFLPVGEQKQPEMEAIGNLLFAEE----------------PIQWPTVSNDPLNEYQTPFLATMAFPTLFPDGKG 485          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: UPI00109B8421 (uncharacterized protein LOC110252718 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B8421)

HSP 1 Score: 80.1 bits (196), Expect = 4.800e-14
Identity = 74/212 (34.91%), Postives = 100/212 (47.17%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFT---VSVAR--VEAALVWLIANNPAYKDVRMNISRIAHLGGEEVNVIHLFDTIPADEEEEGDGGAGESTGVP---PERERDYQGGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPRAGE-PLREDNTPHLATMCFPTLFPTGAG 203
            PGGQR Y GH I L Q+++ELA +LP  P   D+ +++++       KGR  T   VSV +  V  AL+WL  NNP Y DV ++   +  L    V V  L  T+ +DE    D  A    G P   P  +R Y            SF+P        E D +R    +       +  +N+P   + P+ E  TP LATM FPTLFP G G
Sbjct:   34 PGGQRGYSGHCINLPQNVKELALSLPRYP--KDLSVIIVKV------KGRDNTFKDVSVRKQKVYDALLWLTNNNPHYSDVEIDEHALNALPINGVPVDLL--TVESDEAIISDNNAEVDLGPPTDNPFEDRAYN-----ESIDMSSFLPVGEQ-QQQELDAVRNQISA-------NEPLNWPTVQDRPVNEYQTPFLATMAFPTLFPDGKG 222          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: A0A6S7J0R9_PARCT (Helitron_like_N domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J0R9_PARCT)

HSP 1 Score: 79.7 bits (195), Expect = 7.970e-14
Identity = 77/223 (34.53%), Postives = 100/223 (44.84%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFT-----VSVARVEAALVWLIANNPAYKDVRMNISRIAHLGGEEVNVI-HLFDTIPADEEEE----------GDGGAGEST--GVPPERERD-YQGGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPRAGE-PLREDNTPHLATMCFPTLFPTGAG 203
            PGGQR Y GH I L Q + +LA +LP   C  DIP+VV+      + KG+  T     V   +VE AL WLI +NP Y DV+++I  +       VN I H    I  + + E          GD      T   +  E E D +   T        SF+P      L E D I+               +++P  G+ PL E NTP LATM FP LFP G G
Sbjct:   34 PGGQRGYSGHCINLPQKVTDLAKSLP--RCPKDIPVVVV------TMKGKDNTFKDVVVRKNKVEQALQWLIKHNPHYHDVKIDIDLLDTFP---VNGIPHNLQVIETESDPEEISDEVISQSGDQNVLHETVDNICVENEDDVFDEKTETS-----SFLPQSINEQL-EHDAIQNRL---------GAKIDWPDVGDQPLNEYNTPFLATMAFPCLFPDGKG 230          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8)

HSP 1 Score: 79.0 bits (193), Expect = 1.620e-13
Identity = 70/207 (33.82%), Postives = 101/207 (48.79%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFTVSVARVEAALVWLIANNPAYKDVRMNISRIAHLGGEEVNVIHLFDTIPADEEEEGDGGA---GESTGVPPERERDYQGGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAG 203
            PGGQR Y GH I L Q+I+ELA +LP  P   D+ +++++   G +   +   V   +V  AL WLI NNP Y DV+++   +  L    V    L  T+  ++E   D      G  T  P E +R Y            SF+P     +  +E ++    + L+   G+  M ++P    +PL E  TP LATM FPTLFP G G
Sbjct:  667 PGGQRGYSGHCINLPQNIKELALSLPRYP--KDLSVIIVKV-KGRNDSYKDVNVRRQKVTDALTWLIQNNPHYSDVQIDCIALNTLPENAVPSDLL--TVETEDEFVSDNNEPDLGPPTDNPCE-DRVYN-----ESNDMNSFLPV----SQQQEQEVEAVRQQLS---GDEPM-SWPNVEDQPLNEYQTPFLATMAFPTLFPDGKG 854          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: UPI001CF4DE45 (uncharacterized protein LOC114960596 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4DE45)

HSP 1 Score: 77.4 bits (189), Expect = 5.470e-13
Identity = 74/213 (34.74%), Postives = 100/213 (46.95%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFT---VSVARVEA--ALVWLIANNPAYKDVRMNISRIAHLG----GEEVNVIHLFDTIPADEEEEGDGGAGESTGVPPERERDYQGGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAG 203
            PGGQR Y GH I L Q+I +LA +LP  P   D+ ++++      S KG+  T   V+V R +   AL+WL  NNP YKDV +N+  + +L       ++  +   D I +DE  E D   G  T  P E +  Y   T        S +P     +  E D I+               V +P    EPL E  TP+LATM FP LFP G G
Sbjct:  519 PGGQRGYSGHCINLPQNINDLASSLPRYP--KDLSVIIV------SVKGKDNTFKDVNVRRQKVLDALLWLRVNNPLYKDVEINVQALEYLPINGIPSDLLTVETSDYI-SDEVVEPD--VGPPTDNPSE-DVVYDESTETS-----SLLPVGEQ-HKQELDAIKDQLSG-------KQPVPWPTLQDEPLNEYQTPYLATMAFPALFPDGKG 706          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: UPI001CF4373B (uncharacterized protein LOC122964260 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4373B)

HSP 1 Score: 75.9 bits (185), Expect = 6.440e-13
Identity = 72/210 (34.29%), Postives = 97/210 (46.19%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGRQFTVSVARVEAALVWLIANNPAYKDVRMNISRIAHLGGEEVNVIHLFDTIPAD----EEEEGDGGAGESTGVPPERERD--YQGGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPRA-GEPLREDNTPHLATMCFPTLFPTGAG 203
            PGGQ  Y GH I LSQ++ ELAH+LP  P   D+ ++V++   G     +  TV    V  AL WLI NNP YKD+ +N         + +N + L   +P D    E E  +  A     + P+ E D  Y   T        SF+P   P    +E    +    L      +T + +P    EPL E   P LAT+ FPTLFP G G
Sbjct:   34 PGGQWGYSGHCINLSQNVAELAHSLPRYP--KDLSVIVVKM-KGKDNNFKDVTVRRQNVADALQWLINNNPHYKDIIVN--------QDSLNSLPLHG-VPQDLLSVETENLENIATCEPNLGPQNEEDIVYNESTE-----MSSFLPI--PECQQQEVQAIQQQLLLCH---QATHMPWPTVDNEPLNEYVNPFLATLAFPTLFPDGRG 221          
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Match: A0A165JUI9_EXIGL (Uncharacterized protein (Fragment) n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165JUI9_EXIGL)

HSP 1 Score: 74.7 bits (182), Expect = 7.880e-13
Identity = 63/211 (29.86%), Postives = 84/211 (39.81%), Query Frame = 0
Query:    1 PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIP-----IVVIQPPDGGSW---KGRQFTVSVARVEAALVWLIANNPAYKDVRMNISRIAHLGGEEVNVIHLFDTIPADEEEEGDGGAGESTGVPPERERDYQGGTRPRGQPRESFIPADAPGNLSEEDDIRRGFRSLTRGGGNSTMVNYPRAGEPLREDNTPHLATMCFPTLFPTGAG 203
            P  QR   GHII   Q +Q +A  LP  P   ++      I V   P    W   K +  TV   RV AAL WL ANNP Y+DV++N   +  L  + +   H+   +P   +E                   Y G T       E+ + AD  G +S  D      R +  GGG    ++      P      P L  M +PTLFP G G
Sbjct:   29 PWAQRAMRGHIITYPQHVQHIASLLP--PSVEELASRVAIIFVGSSPPSTEWLLKKAKPLTVRADRVRAALRWLKANNPLYRDVQINTGVLEQLERDPLLPFHIQHVVPTRADES--------------LTSRYDGTTPDIAF--ENVVIADVEGRVSSNDLRAAALRHMKTGGG---AIHIYHDATPADNIKQPTLFPMIYPTLFPYGVG 218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63212.13895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2R2_9PHAE8.820e-3638.49Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KFJ0_9PHAE1.410e-3539.37ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE4.720e-2448.67ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI000F550EEB1.220e-1433.33uncharacterized protein LOC113674125 n=1 Tax=Pocil... [more]
UPI00109B84214.800e-1434.91uncharacterized protein LOC110252718 n=1 Tax=Exaip... [more]
A0A6S7J0R9_PARCT7.970e-1434.53Helitron_like_N domain-containing protein n=1 Tax=... [more]
UPI00109BE5C81.620e-1333.82uncharacterized protein LOC110237019 n=1 Tax=Exaip... [more]
UPI001CF4DE455.470e-1334.74uncharacterized protein LOC114960596 n=1 Tax=Acrop... [more]
UPI001CF4373B6.440e-1334.29uncharacterized protein LOC122964260 n=1 Tax=Acrop... [more]
A0A165JUI9_EXIGL7.880e-1329.86Uncharacterized protein (Fragment) n=1 Tax=Exidia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63212contigH-elongata_contig63212:2209..2898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63212.13895.1mRNA_H-elongata_contig63212.13895.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63212 2209..2898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63212.13895.1 ID=prot_H-elongata_contig63212.13895.1|Name=mRNA_H-elongata_contig63212.13895.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
PGGQRHYEGHIIILSQDIQELAHTLPWRPCTNDIPIVVIQPPDGGSWKGR
QFTVSVARVEAALVWLIANNPAYKDVRMNISRIAHLGGEEVNVIHLFDTI
PADEEEEGDGGAGESTGVPPERERDYQGGTRPRGQPRESFIPADAPGNLS
EEDDIRRGFRSLTRGGGNSTMVNYPRAGEPLREDNTPHLATMCFPTLFPT
GAG
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