prot_H-elongata_contig6299.13877.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6299.13877.1
Unique Nameprot_H-elongata_contig6299.13877.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 6.950e-26
Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 MKIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            M +D++ +TIP  DDSYF R E A KTDED FF Q +K + VS+KRKADQK VD+ ++  ++  P+LK +L A FSLKKGDRPHEM+F
Sbjct:   93 MSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQGAKSSTVSDKRKADQKTVDAGVLAAMT-NPMLKAYLNAKFSLKKGDRPHEMIF 179          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: A0A0P1B5I3_PLAHL (60S ribosomal protein L6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5I3_PLAHL)

HSP 1 Score: 89.4 bits (220), Expect = 4.760e-20
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K++I  L +P  DD+YFA+ ++AKK  ED FFAQ+S   ++ E+RK DQK VDS L+ K+ A+P LK +L A FSL K DR H + F
Sbjct:  137 KVNIEGLNLPAIDDAYFAKEKAAKKNKEDQFFAQSSAAPVIPEQRKQDQKAVDSVLLKKLDAEPFLKAYLNAKFSLTKNDRVHTLKF 223          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: D0MZV7_PHYIT (60S ribosomal protein L6 n=12 Tax=Phytophthora TaxID=4783 RepID=D0MZV7_PHYIT)

HSP 1 Score: 89.0 bits (219), Expect = 6.310e-20
Identity = 43/87 (49.43%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K++I  L +P  DD+YFA+ ++AKK+ E+ FFAQ+S   ++ E+RK DQK VDS L+ K+ A+P LK +L A FSL K DR H + F
Sbjct:  134 KVNIEGLALPAIDDAYFAKEKAAKKSKEEQFFAQSSTAPVIPEQRKKDQKAVDSALIKKLEAEPFLKSYLNAKFSLTKNDRAHALKF 220          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: A0A485KCY7_9STRA (60S ribosomal protein L6 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCY7_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.340e-18
Identity = 44/87 (50.57%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            KIDI+++ +P  +D+YFA+ ++  K DE+ FFAQ+S  AIVSE+RK DQK VD+ L+ K++A   LK +L A FSL K D+ HE+ F
Sbjct:  151 KIDISDVKLPELNDAYFAKEKTHAKKDEEQFFAQSSTSAIVSEQRKKDQKAVDAALLKKINATAHLKHYLNAKFSLTKNDKVHELKF 237          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: A0A7S0C6J2_9STRA (60S ribosomal protein L6 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C6J2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.020e-18
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNESAKKTDEDNFFA-QASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K++++ + +   +D YFAR  S     E+ FFA  A K A+VS+KRK DQK +DS LM  V + PLLKE+L + FSL++GD+PH+M+F
Sbjct:   30 KVNVSGVDVSSINDKYFARESSTTDEGEEEFFAGDAPKAAVVSDKRKEDQKKIDSVLMKNVESVPLLKEYLGSKFSLRQGDKPHKMVF 117          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: B8CBR7_THAPS (60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBR7_THAPS)

HSP 1 Score: 82.4 bits (202), Expect = 8.940e-18
Identity = 43/88 (48.86%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQ-ASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K+D++   +   DD+YFAR +S     E+ FFA  A+K A+VS++RKADQK VD+ ++  V + PL+K +L + FSLKK DRPHEM+F
Sbjct:   91 KVDVSGADVSKIDDAYFARVKSDSAEGEEEFFANDAAKPAVVSDQRKADQKKVDAAILKAVESTPLMKNYLGSNFSLKKHDRPHEMIF 178          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: A0A484DQP3_BRELC (60S ribosomal protein L6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQP3_BRELC)

HSP 1 Score: 82.0 bits (201), Expect = 3.130e-17
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K++I  L +P  DD+YFA+ + +K + E+ FFAQ++   ++ E+RK DQK VDS L+ K+ A+P LK +L A FSL K DR H + F
Sbjct:  137 KVNIEGLELPAVDDAYFAKEKISKSSKEEQFFAQSNVAPVIPEQRKNDQKSVDSALLKKLDAEPFLKAYLNAKFSLTKNDRVHALKF 223          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: A0A5D6Y3Z6_9STRA (60S ribosomal protein L6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3Z6_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.650e-17
Identity = 40/88 (45.45%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNE-SAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K+D+  + +P  +D+YFA+ + S+KK+ E+ FFAQ++   ++ ++RK DQK VD+ L+ KV A+PLLK +L A FSL K DR H + F
Sbjct:  142 KVDLEGVKLPEINDAYFAKEKVSSKKSKEEQFFAQSASAPVIPDQRKKDQKAVDAALLKKVEAEPLLKAYLNAKFSLTKNDRAHALKF 229          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: K3W6W0_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6W0_GLOUD)

HSP 1 Score: 80.5 bits (197), Expect = 1.400e-16
Identity = 39/88 (44.32%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNE-SAKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            K+D+  +++P  +D+YFA+ + S+KKT E+ FFAQ++   ++ ++RK DQK VD+ L+ K+ A+P LK +L A FSL K DR H + F
Sbjct:  144 KVDLEGVSLPEINDAYFAKEKVSSKKTKEEQFFAQSAAAPVIPDQRKKDQKAVDAALIKKIDAEPFLKAYLNAKFSLTKNDRAHALKF 231          
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Match: A0A024TIS5_9STRA (60S ribosomal protein L6 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TIS5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.320e-15
Identity = 47/89 (52.81%), Postives = 62/89 (69.66%), Query Frame = 0
Query:    2 KIDIANLTIPVEDDSYFARNES--AKKTDEDNFFAQASKGAIVSEKRKADQKIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF 88
            KIDI+++ +P   D+ FA+ +   AKK+ ED FFAQ+S  AIVSE+RK DQK VD+ L+ K++A   LK +L A FSL K DR HEM F
Sbjct:  157 KIDISDVKLPELTDASFAKEKKTHAKKS-EDEFFAQSSTTAIVSEQRKKDQKAVDAALLKKINATAHLKHYLNAKFSLTKNDRVHEMKF 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6299.13877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G468_ECTSI6.950e-2657.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0P1B5I3_PLAHL4.760e-2050.5760S ribosomal protein L6 n=1 Tax=Plasmopara halste... [more]
D0MZV7_PHYIT6.310e-2049.4360S ribosomal protein L6 n=12 Tax=Phytophthora Tax... [more]
A0A485KCY7_9STRA1.340e-1850.5760S ribosomal protein L6 n=1 Tax=Aphanomyces stell... [more]
A0A7S0C6J2_9STRA2.020e-1847.7360S ribosomal protein L6 n=1 Tax=Proboscia inermis... [more]
B8CBR7_THAPS8.940e-1848.8660S ribosomal protein L6 (Fragment) n=1 Tax=Thalas... [more]
A0A484DQP3_BRELC3.130e-1745.9860S ribosomal protein L6 n=1 Tax=Bremia lactucae T... [more]
A0A5D6Y3Z6_9STRA9.650e-1745.4560S ribosomal protein L6 n=1 Tax=Pythium brassicum... [more]
K3W6W0_GLOUD1.400e-1644.3260S ribosomal protein L6 n=1 Tax=Globisporangium u... [more]
A0A024TIS5_9STRA1.320e-1552.8160S ribosomal protein L6 n=2 Tax=Aphanomyces TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR00091560S ribosomal protein L6EPFAMPF01159Ribosomal_L6ecoord: 2..88
e-value: 1.6E-21
score: 76.9
IPR00091560S ribosomal protein L6EPANTHERPTHR1071560S RIBOSOMAL PROTEIN L6coord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6299contigH-elongata_contig6299:8343..8803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6299.13877.1mRNA_H-elongata_contig6299.13877.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6299 7725..8899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6299.13877.1 ID=prot_H-elongata_contig6299.13877.1|Name=mRNA_H-elongata_contig6299.13877.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MKIDIANLTIPVEDDSYFARNESAKKTDEDNFFAQASKGAIVSEKRKADQ
KIVDSELMTKVSAQPLLKEFLCAMFSLKKGDRPHEMLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR00091560S_ribosomal_L6E