prot_H-elongata_contig11789.1387.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig11789.1387.1
Unique Name	prot_H-elongata_contig11789.1387.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	88

Homology

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BLAST of mRNA_H-elongata_contig11789.1387.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 6.700e-6
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0

Query:    1 MTKEIREADAKLKKELREQRRQHRAAGLKTGVVLEVVVAKAADETGFCEGHGSG 54
            MT+E +  +A++K ELREQRRQ++AAG K+GVVLE  VAKAA      +G G G
Sbjct:  180 MTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGG 233

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BLAST of mRNA_H-elongata_contig11789.1387.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 1.780e-5
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0

Query:    1 MTKEIREADAKLKKELREQRRQHRAAGLKTGVVLEVVVAKAADETGFCEGHGSG 54
            MT+E +  +A+ K ELREQRRQ++AAGLK+GVVLE  VA+AA      +G G G
Sbjct:  230 MTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGG 283

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig11789.1387.1 vs. uniprot

BLAST of mRNA_H-elongata_contig11789.1387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L640_9PHAE	6.700e-6	55.56	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LEM4_ECTSI	1.780e-5	55.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..22

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig11789	contig	H-elongata_contig11789:4783..5046 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig11789.1387.1	mRNA_H-elongata_contig11789.1387.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig11789 4783..5046 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig11789.1387.1 ID=prot_H-elongata_contig11789.1387.1|Name=mRNA_H-elongata_contig11789.1387.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MTKEIREADAKLKKELREQRRQHRAAGLKTGVVLEVVVAKAADETGFCEG
HGSGTGRSSPVEVETICGKRVEAGGSENGTVDLTRKRR