prot_H-elongata_contig62893.13868.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62893.13868.1
Unique Nameprot_H-elongata_contig62893.13868.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length191
Homology
BLAST of mRNA_H-elongata_contig62893.13868.1 vs. uniprot
Match: A0A6H5JAD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD5_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 5.720e-20
Identity = 79/182 (43.41%), Postives = 105/182 (57.69%), Query Frame = 0
Query:   13 ELRLIAIDGAGDGL--------------RPWLSAESCLYLAAVAVSAGNGAES-ARLLDATVAASAAAVQDRR---TSVENSTWLG-ICGRGSSWRELSLRCLTEERLEYPGGGRRDPKAA----LRRVDSAIAAYEDSSDARGAPAASSIF-ELRGSLELSRAPLLLKLG--RPDDARAAI 168
            ELR IA  GA D                RPWL +E+CL+LA +A+ AG+ +++ A L  A  +A AA +   R   T    + W G + G GS WRELSLRCL +ERL   GG   DP AA    L RVD+A+AA+++SS  RG P     + ++ G L L+RA LLLKLG  R ++ARAA+
Sbjct:  407 ELRRIARGGAQDEAGGDNADGAAAASPRRPWLKSEACLHLAGLALWAGDISQADAHLKTAAESAVAARIPPHRGSSTKQAGAPWAGALSGPGSDWRELSLRCLVDERLGDGGG---DPAAAAALGLGRVDAAMAAFDESSRLRGKPDGEGDYADVLGRLGLARASLLLKLGGGRLEEARAAV 585          
BLAST of mRNA_H-elongata_contig62893.13868.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 6.200e-18
Identity = 77/183 (42.08%), Postives = 104/183 (56.83%), Query Frame = 0
Query:   13 ELRLIAIDGAGDGL--------------RPWLSAESCLYLAAVAVSAGNGAESARLLDATVAASAAAVQ---DRRTSVENS--TWLG-ICGRGSSWRELSLRCLTEERLEYPGGGRRDPKAA----LRRVDSAIAAYEDSSDARGAPAASSIF-ELRGSLELSRAPLLLKLG--RPDDARAAI 168
            ELR IA  GA D                RPWL +E+CL+LA +A+ AG+  ++   L  T A SA A +    RR+S + +   W G + G GS WRELSLRCL +ERL   GG   DP AA    L RVD+A+ A+++S   RG P     + ++ G L L+RA LLLKLG  R ++AR+A+
Sbjct:  232 ELRRIARGGAQDEAGGDKTDGAAAASPRRPWLKSEACLHLAGLALWAGDVYQADAFLK-TAAGSAVAARIPPHRRSSTKQAGAPWAGALSGPGSDWRELSLRCLVDERLGDGGG---DPAAAAALGLGRVDAAMTAFDESFRLRGPPDGEGDYADVLGRLGLARASLLLKLGGGRLEEARSAV 410          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62893.13868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAD5_9PHAE5.720e-2043.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G059_ECTSI6.200e-1842.08Similar to Tetratricopeptide repeat protein 37 (TP... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62893contigH-elongata_contig62893:1590..2162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62893.13868.1mRNA_H-elongata_contig62893.13868.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62893 1576..2162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62893.13868.1 ID=prot_H-elongata_contig62893.13868.1|Name=mRNA_H-elongata_contig62893.13868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=191bp
MSSAYWPPLDPEELRLIAIDGAGDGLRPWLSAESCLYLAAVAVSAGNGAE
SARLLDATVAASAAAVQDRRTSVENSTWLGICGRGSSWRELSLRCLTEER
LEYPGGGRRDPKAALRRVDSAIAAYEDSSDARGAPAASSIFELRGSLELS
RAPLLLKLGRPDDARAAIAIVTEAEKLSASVRRDEEGVSEA
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