prot_H-elongata_contig6287.13862.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6287.13862.1
Unique Nameprot_H-elongata_contig6287.13862.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length374
Homology
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: D7FHN7_ECTSI (von Willebrand A domain containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN7_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 3.050e-37
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 0
Query:    3 PTELSIGGTSMCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGE--LD--VTSGSNDIP--TPAPAEL---AYAVPIDASTMAPTESFFQSFPECSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCII 185
            P    I     CSNG+ G+ESSNG+ACC   CG CGG GCS  G P   ++DCC +EIV+ G +C+ATG++PC IDG+  LD  V S S  +P  T  P+     +Y+   D  +    +S    F  C+NG+ G+ES+ G+ CC A+CGQCGG+GC      +FG +DCC TEI+D+G  C+E G APC +
Sbjct:   96 PDSAPISDIERCSNGVYGIESSNGKACCALTCGSCGGVGCS--GRPG-GSYDCCESEIVEEGEACAATGASPCYIDGDEVLDPVVPSMSPVVPEETDMPSGFGGGSYSYSYDFVSWD-GDSMDDQFMWCTNGVPGMESAGGEVCCPADCGQCGGVGCG-----EFG-EDCCITEIMDYGQPCSEIGTAPCYL 277          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: A0A6H5L879_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L879_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.630e-36
Identity = 110/372 (29.57%), Postives = 149/372 (40.05%), Query Frame = 0
Query:   11 TSMCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPT-YDAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGSNDIPTPAPAELAYAVPIDASTMAPTESFFQSFPECSN--GISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPD-DCCATEIVDFGMSCAETGAAPCIIGEVAPVSTDLSTPAPVETPVSTIATVGPTSETTAAAVSSXXXXXXXXXXXXXXXXPTDGLTPAPIXXXXXXXXXXVTSLTYPPVPETSSCMDSFMFINCYTEDTNDPFFTKYADGGMTPEMCFETCTAEDALYMGLIGGNECACGND---AQYLLDAHTE---GSCTSTCVGDADQFCGGLLSFDLYVLNEDC 372
            T  CSNGI G+ES+NG  CC A CG CGG  C+   +    D  DCC ++I+ FG SCS    APC ID     ++G+                                  CSN  G+ G+ S+NG  CC +ECG CGG  C+   L     D DCC ++I   G+ C+++GAAPCI+ +    S D                     ET +  V                                             PV  T  C            D  DPF        +T E C+E C +E +LY  L+ G+ C+CG+     Q  LD++ E   G+C + C G  D+ CGG  +FDLY +   C
Sbjct:   49 TQTCSNGIEGIESTNGGVCCPALCGLCGGAACTKAAVDAGLDDGDCCFSDIIRFGASCSENQMAPCIIDDASKASAGNT---------------------------------CSNANGVEGISSANGDVCCPSECGLCGGRDCTQAALAAGLDDGDCCVSDITKEGVKCSDSGAAPCIVYD----SED---------------------ETGSNQVREAST----------------------------------------PVYITLGCGK--------IGDYEDPFTVSSTVSDLTVEACYELCASESSLYFALVEGDVCSCGDQETFVQTFLDSYEEQTAGTCNTACPGSPDETCGGAQAFDLYRILPTC 314          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.530e-35
Identity = 126/410 (30.73%), Postives = 172/410 (41.95%), Query Frame = 0
Query:    1 MAPTELSIGGTSMCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGSNDIPTPAP--------------------AELAYAVPIDASTMAPTESFFQSFPECSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCII-GEVAPVSTDLST-PAPVETP--------VSTIATVGPTSETTAAAVSSXXXXXXXXXXXXXXXXPTD-------GLTPAPIXXXXXXXXXXVTS-----LTYPPVPETSSCMDSFMFINCYTEDTNDP-FFTKYADGGMTPEMCFETCTAEDALYMGLIGGNECACG-NDAQYLLDAHTEGSCTSTCVGDADQFCGGLLSFDLY 366
            MAPT+  +    +CS GI G+ESS+G  CC   C QCGG GCSTVGLP Y A  CC ++++  G+SCS +  APC +D          + PTP P                                          S   CSNGI G++S  G  CC+AECG+CGG GC+  G    G D+CC   I ++G  C+ T AAPCI+ GE       L+  P   + P        +S+  T     ET +A  ++                  D       G+   P           V S     L++ P PE         ++ CY +   D   F   +   MT  +C E C  +DA Y G    +EC CG +D +   + H EG C   C GD    CGG  ++ L+
Sbjct:  603 MAPTDEVV----VCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLD----------ETPTPEPNAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVCSNGIPGIQS--GITCCLAECGECGGPGCAEFG-GGLGQDNCCQGRIEEYGELCSVTLAAPCIVDGEGCLYFAGLACLPHLAKQPLHHVRSGLISSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEE------YVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLF 989          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.980e-26
Identity = 75/190 (39.47%), Postives = 101/190 (53.16%), Query Frame = 0
Query:   14 CSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGSNDIPTPAP-AELAYAVPIDASTMAPTESFFQSFPE----CSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCIIGEVAPVSTDLSTP 198
            CS GI G+ESS+G  CC   C  CGG+GCSTVG+P Y    CCS++I+  G SCS TG APC +    DV      + TPAP AE                            CSNGI G++S  G +CC+A+CG+CGG  C   G    G D+CC ++I ++G  C+    APC++   AP  + ++ P
Sbjct: 1375 CSTGIPGIESSDGAVCCPTGCTMCGGSGCSTVGMPDYGPESCCSSDILSTGASCSETGEAPCVL---ADV------VLTPAPVAEPTXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQS--GVSCCLADCGECGGSDCDEFG-GGLGADNCCESDIEEYGELCSIKLEAPCVVDASAPAPSPVAMP 1552          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 8.420e-26
Identity = 76/197 (38.58%), Postives = 102/197 (51.78%), Query Frame = 0
Query:   14 CSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGSNDIPTPAPAELAYAVPIDASTMAPTESFFQSFPE------------CSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCIIGEVAPVSTDLSTP 198
            CSNGI G++S N  ACC+A CG CGG+GC+ +G    +  +CC +EI DFG  CS   +APC +DG           P P+P  +  A                                CSNGI G++S N  ACC+AECG CGG GC+ +G    G D+CC +EI DFG  C+   AAPC++   AP  + ++ P
Sbjct: 1769 CSNGIPGIQSGN--ACCLAECGGCGGSGCAQLGGGLGED-NCCQSEIEDFGELCSVKMAAPCVVDGSA---------PAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDMCSNGIPGIQSGN--ACCLAECGGCGGSGCAQLG-GGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMP 1950          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 1.940e-25
Identity = 81/215 (37.67%), Postives = 101/215 (46.98%), Query Frame = 0
Query:   13 MCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGSNDI-------------------PTPAPAELAYAVPIDASTMAPTESFFQSFPE---CSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCIIGE-VAPVSTDLSTPAPVETP 204
            +CS GI G+ESS+G  CC   C QCGG GCSTVGLP Y A  CC  ++   G+SCS +  APC +D  L  T                         PT APA    A+                      CSNG  G++S  G +CC AEC  CGG GC+  G    G D+CCA  I ++G  C+   AAPC + +  AP  T  +T  PV  P
Sbjct:  411 VCSTGIPGIESSDGTVCCPINCTQCGGEGCSTVGLPEYGAESCCELDVQSAGVSCSVSEEAPCVLDDVLSPTETPXXXXXXXXXXXXXXXXXXXTPEPTAAPATEMPAMAXXXXXXXXXXXXXXXXXXXDVCSNGFPGIQS--GDSCCHAECEACGGFGCAEFG-GGLGEDNCCAVRIEEYGELCSTALAAPCYVDDGSAPPPTPATTEMPVVMP 622          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.590e-17
Identity = 72/179 (40.22%), Postives = 91/179 (50.84%), Query Frame = 0
Query:   12 SMCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDF--GMSCSATGSAPCAIDGELDVTSGSNDIPTPAPAELAY---AVPIDASTMAPTESFFQSFPECSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCII 185
            S CSNGI GV  S+G  CC+ ACGQCGG GC  +   T  A DCC   I +   G+ C   G APC + G            TP+P   A+   A P+  ST             CSNGI+G +  +G  CC+  CG+CGG GC T+     G D+CC + I+  G+ C E   APCII
Sbjct:  290 STCSNGIPGV--SDGDVCCLEACGQCGGEGCGAI-AGTNGASDCCPDTIKEESGGVFC---GEAPCVMAGF-----------TPSPLNPAFDGTAAPVAPST-------------CSNGIAGYQ--DGAICCLEICGRCGGDGCGTI-PGTGGSDNCCPSTILAAGVVCGE---APCII 432          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: A0A6H5JSA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 7.950e-17
Identity = 65/164 (39.63%), Postives = 88/164 (53.66%), Query Frame = 0
Query:   12 SMCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDF--GMSCSATGSAPCAIDGELDVTSGSNDIPTPAPAELAYAVPIDASTMAPTESFFQSFPECSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGM 173
            S CSNGI GV  S+G+ CC+ ACGQCGG GC  +   T  A DCC   I +   G+ C   G APC ++G            TP+P  L  A+   A+ +AP+         CSNGI G +  +G  CC+  CG+CGG GC T+     G D+CC ++I+  G+
Sbjct:    4 STCSNGIPGV--SDGEVCCLEACGQCGGVGCGAI-AGTNGASDCCPDTIKEESGGVFC---GEAPCVMEGF-----------TPSP--LNPALDGTAAPVAPST--------CSNGIPGYQ--DGVICCLEICGRCGGDGCGTI-PGTGGSDNCCPSDILAAGV 137          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.530e-15
Identity = 75/197 (38.07%), Postives = 93/197 (47.21%), Query Frame = 0
Query:    6 LSIG--GTSMCSNGISGVESSNGQACCVAACGQCGGTGCST--VGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGS-------------NDIPTPAPAELAYAVPIDASTMAPTESFFQSFPECSNGISGVESSNGQACCVAECGQCGGMGCSTVGLPDFGPDDCCATEIVDFGMSCAETGAAPCII 185
            LS+G      CSNG  G+E S   ACCV+ CG CGG+GCS+   GL T D  DCC+  I+  G  CSATG APC +DG+   +  +             ND P P     +Y   +D  T   TE        C+N   G      Q    A CG CGG GCS    P     DCC  +I + G  C+ TG APC +
Sbjct:   11 LSVGVAAAQKCSNGFPGIEKSG--ACCVSDCGTCGGSGCSSRESGL-TGD--DCCTKNILKQGAPCSATGHAPCFLDGDSTPSKSTPTESDGFVYEGCFNDKPEP-DRLFSYVTTMDDMT---TEL-------CANECKGYAFFGLQWGREAGCGTCGGTGCSQ--RPGLTDSDCCIGKIEESGPLCSVTGKAPCFV 189          
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Match: A0A6H5JQM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM4_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 5.100e-14
Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   14 CSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTYDAFDCCSTEIVDFGMSCSATGSAPCAIDGE--LDVTSGSNDIPTPAPAEL-------AYAVPIDASTMAPTESFFQSFPECSNGISGVESSNGQA 136
            CSNG+ G+ESSNG ACC   CG CGG GCS     +YD   CC +EIV+ G +C+ATG++PC +DG+  LD    S     P   ++       +Y+   D  +    +S    F  C+N + GVES+ G++
Sbjct:  170 CSNGVYGIESSNGLACCALTCGSCGGVGCSRRPGGSYD---CCESEIVEEGEACAATGASPCYMDGDEVLDPVVPSMSPVVPEETDMPGGFGGSSYSYSYDFVSWD-GDSMDDQFMWCTNSVPGVESAGGES 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6287.13862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7FHN7_ECTSI3.050e-3745.31von Willebrand A domain containing protein n=2 Tax... [more]
A0A6H5L879_9PHAE1.630e-3629.57WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JJ37_9PHAE1.530e-3530.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ68_ECTSI1.980e-2639.47WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JG29_9PHAE8.420e-2638.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRE8_ECTSI1.940e-2537.67EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FZM1_ECTSI1.590e-1740.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSA0_9PHAE7.950e-1739.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRN0_ECTSI1.530e-1538.07Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JQM4_9PHAE5.100e-1439.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 278..369
e-value: 8.7E-10
score: 48.5
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 282..359
e-value: 6.2E-13
score: 48.7
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 278..369
score: 9.639

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6287contigH-elongata_contig6287:1629..4933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6287.13862.1mRNA_H-elongata_contig6287.13862.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6287 13..5021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6287.13862.1 ID=prot_H-elongata_contig6287.13862.1|Name=mRNA_H-elongata_contig6287.13862.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=374bp
MAPTELSIGGTSMCSNGISGVESSNGQACCVAACGQCGGTGCSTVGLPTY
DAFDCCSTEIVDFGMSCSATGSAPCAIDGELDVTSGSNDIPTPAPAELAY
AVPIDASTMAPTESFFQSFPECSNGISGVESSNGQACCVAECGQCGGMGC
STVGLPDFGPDDCCATEIVDFGMSCAETGAAPCIIGEVAPVSTDLSTPAP
VETPVSTIATVGPTSETTAAAVSSADLSTPSPVEMSGSTFPTDGLTPAPI
PTDGLTPAPTVTSLTYPPVPETSSCMDSFMFINCYTEDTNDPFFTKYADG
GMTPEMCFETCTAEDALYMGLIGGNECACGNDAQYLLDAHTEGSCTSTCV
GDADQFCGGLLSFDLYVLNEDCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd