prot_H-elongata_contig62772.13856.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig62772.13856.1
Unique Name	prot_H-elongata_contig62772.13856.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	192

Homology

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 2.140e-108
Identity = 178/189 (94.18%), Postives = 183/189 (96.83%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDINA+LVEDQGFLQILRDLICDPNPTVV ANAVAALSEIGDTSG+DVMEI+TSVLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHANSAVVMSAVKVVL+YLDSV + DT RSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKR GILESEIKV
Sbjct:   94 DPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVV-ANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKV 281

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA)

HSP 1 Score: 315 bits (808), Expect = 3.710e-99
Identity = 166/189 (87.83%), Postives = 173/189 (91.53%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDINA LVEDQGFLQ+LRDL+CDPNPTVV ANAVAALSEI DT G+DVM+I T+ LQKLLAALNECTEWGQVFILDSLAKY PVDG EAEGIIERVTPRLQHANSAVVMSAVKV+LSYLD +TN DT R FSRKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE EIKV
Sbjct:  144 DPYVRKTAAVCVAKLYDINAGLVEDQGFLQVLRDLVCDPNPTVV-ANAVAALSEITDTGGKDVMQITTATLQKLLAALNECTEWGQVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKV 331

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.430e-91
Identity = 150/193 (77.72%), Postives = 168/193 (87.05%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLD----SVTNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDI   LV+++GFL++L DLI D NP+VV AN VAALSEI +TSG+DVM+I+ +VLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++    S  N D IR+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE EI+V
Sbjct:  146 DPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVV-ANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGSSGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRV 337

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.870e-91
Identity = 151/189 (79.89%), Postives = 171/189 (90.48%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDI  +LV+++GFL +L DLI D NP+VV AN VAALSEI +TSG+DVM+I+  VLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHAN+AVVMSAVKV+L+Y+D++ N+D IR+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE+EIKV
Sbjct:  145 DPYVRKTAAVCVAKLYDIAPDLVQERGFLDVLHDLISDSNPSVV-ANGVAALSEISETSGRDVMKISAGVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV 332

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A7S3LFQ5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ5_9STRA)

HSP 1 Score: 293 bits (749), Expect = 8.020e-91
Identity = 155/191 (81.15%), Postives = 172/191 (90.05%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDIN ELV ++GFL++L DLI D NP+VV AN VAALSEI +TSG+DVM+I+ SVLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ +   N+D+IR  +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE+EIKV
Sbjct:  137 DPYVRKTAAVCVAKLYDINPELVVERGFLEVLHDLISDSNPSVV-ANGVAALSEIAETSGKDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSANSDSIRHLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPHILENEIKV 326

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA)

HSP 1 Score: 291 bits (746), Expect = 3.380e-90
Identity = 155/191 (81.15%), Postives = 173/191 (90.58%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDI   LV+++GFL+IL DLI D NP+VV AN VAALSEI +TSG+DVM+I+TSVLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ +  +N+DTIR+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE+EIKV
Sbjct:  147 DPYVRKTAAVCVAKLYDIAPALVQERGFLEILHDLISDSNPSVV-ANGVAALSEIAETSGKDVMKISTSVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKV 336

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A1Z5K9X8_FISSO (AP-1 complex subunit beta-1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9X8_FISSO)

HSP 1 Score: 289 bits (740), Expect = 1.240e-89
Identity = 153/191 (80.10%), Postives = 170/191 (89.01%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDI  +LVE++GF++IL DLI D NP+VV AN VAALSEI ++SG+DVM I  SVLQKLLAALNECTEWGQVFILDSLAKYTP DGREAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ +   N+D IR+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE+EIKV
Sbjct:  120 DPYVRKTAAVCVAKLYDIAPDLVEERGFIEILHDLISDSNPSVV-ANGVAALSEIAESSGKDVMRITASVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSQNSDAIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKV 309

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA)

HSP 1 Score: 288 bits (737), Expect = 3.640e-89
Identity = 150/189 (79.37%), Postives = 169/189 (89.42%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYD+   LVE++GFL+ L DLI D NP+VV AN+VAALSE+ +TSG+DVM +++SVLQKLLAALNECTEWGQVFILDSLAKY P DG+EAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ V N DTIR+ +RKLAPPLVTLLNSE E QYVALRNINLIVQKR  ILE+EIKV
Sbjct:  132 DPYVRKTAAVCVAKLYDVAPNLVEERGFLETLHDLISDSNPSVV-ANSVAALSEVAETSGRDVMRVSSSVLQKLLAALNECTEWGQVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKV 319

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.000e-88
Identity = 149/191 (78.01%), Postives = 168/191 (87.96%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDI   LV+++GFL++L DLI D NP+VV AN VAALSEI +TSG+DVM+I+ +VLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ +   N D IR+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR  ILE EI+V
Sbjct:  145 DPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVV-ANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRV 334

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BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Match: B8C7W7_THAPS (Beta subunit of tetrameric clathrin adaptor complex AP1 n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8C7W7_THAPS)

HSP 1 Score: 287 bits (734), Expect = 2.170e-88
Identity = 152/194 (78.35%), Postives = 171/194 (88.14%), Query Frame = 0

Query:    1 DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVAALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV-----TNTDTIRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKV 189
            DPYVRKTAAVCVAKLYDI  ELV+++GF++ L DLI D NP+VV AN VAALSEI +TSG+DVM+I+ SVLQKLLAALNECTEWGQVFILDSLAKYTP D REAEGIIERVTPRLQHANSAVVMSAVKV+LSY+D +      + D+IR+ +RKLAPPLVTLLNSEPE QYVALRNINLIVQKR+ ILE+EIKV
Sbjct:  144 DPYVRKTAAVCVAKLYDIAPELVQERGFIETLHDLISDSNPSVV-ANGVAALSEISETSGRDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMDVMGGSGGAHADSIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRSNILENEIKV 336

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot

BLAST of mRNA_H-elongata_contig62772.13856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J742_9PHAE	2.140e-108	94.18	B2-adapt-app_C domain-containing protein n=2 Tax=E...	[more]
A0A836CH70_9STRA	3.710e-99	87.83	Coatomer protein complex, beta sub-unit n=1 Tax=Tr...	[more]
A0A7S2H873_9STRA	1.430e-91	77.72	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]
A0A7S1VQ66_9STRA	2.870e-91	79.89	Hypothetical protein n=2 Tax=Grammatophora oceanic...	[more]
A0A7S3LFQ5_9STRA	8.020e-91	81.15	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S3PZD9_9STRA	3.380e-90	81.15	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A1Z5K9X8_FISSO	1.240e-89	80.10	AP-1 complex subunit beta-1 n=2 Tax=Fistulifera so...	[more]
A0A7S1FVF1_9STRA	3.640e-89	79.37	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A6U3VDL9_9STRA	1.000e-88	78.01	AP complex subunit beta n=1 Tax=Ditylum brightwell...	[more]
B8C7W7_THAPS	2.170e-88	78.35	Beta subunit of tetrameric clathrin adaptor comple...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..191 e-value: 7.2E-65 score: 221.5
IPR032682	Condensin complex subunit 1, C-terminal	PFAM	PF12717	Cnd1	coord: 1..132 e-value: 3.0E-44 score: 150.9
IPR026739	AP complex subunit beta	PANTHER	PTHR11134	ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT	coord: 1..189
None	No IPR available	PANTHER	PTHR11134:SF30	BETA-ADAPTIN-LIKE PROTEIN B	coord: 1..189
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..188

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig62772	contig	H-elongata_contig62772:249..2998 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig62772.13856.1	mRNA_H-elongata_contig62772.13856.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig62772 249..2998 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig62772.13856.1 ID=prot_H-elongata_contig62772.13856.1|Name=mRNA_H-elongata_contig62772.13856.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
DPYVRKTAAVCVAKLYDINAELVEDQGFLQILRDLICDPNPTVVVANAVA
ALSEIGDTSGQDVMEINTSVLQKLLAALNECTEWGQVFILDSLAKYTPVD
GREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNTDTIRSFSRKL
APPLVTLLNSEPETQYVALRNINLIVQKRAGILESEIKVCA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR032682	Cnd1_C
IPR026739	AP_beta
IPR016024	ARM-type_fold