prot_H-elongata_contig62769.13855.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62769.13855.1
Unique Nameprot_H-elongata_contig62769.13855.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5L7W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.680e-32
Identity = 66/143 (46.15%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC    + L L++    P+ A  R  SPE+R MI AE+ +L + G I +S S WAA C  V+K DG +R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+ I    R  TAFR+ADG LW++ R 
Sbjct:   86 VPACINGELELPLINEFCTPFAAKQRRVSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKYRSKTAFRDADGMLWEFTRA 228          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.900e-32
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC    + L L++    P+ A  R  SPE+R MI AE+ +L + G I +S S WAA C  V+K DG +R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:  137 VPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRA 279          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.640e-32
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC    + L L++    P+ A  R  SPE+R MI AE+ +L + G I +S S WAA C  V+K DG +R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:  139 VPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRA 281          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.800e-32
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC    + L L++    P+ A  R  SPE+R MI AE+ +L + G I +S S WAA C  V+K DG +R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:  661 VPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRA 803          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 9.070e-32
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC    + L L++    P+ A  R  SPE+R MI AE+ +L + G I +S SAWAA C  V+K DG +R+  D+R LN  L S SGGL D+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:   62 VPACINGELELPLINEFCTPFAAKQRRLSPEERRMIRAEIQQLVDRGVIRQSMSAWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLADMQTIFDGLKGKKYFTQVDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRA 204          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5J659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J659_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.630e-31
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC    + L L++    P+ A  R  SPE+R MI AE+ +L + G I +  S WAA CS V+K DG +R+  D+R LN  L S SGGLGD+  I D +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:  190 VPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQPMSLWAAQCSCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTILDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRA 332          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.670e-31
Identity = 66/143 (46.15%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            V AC G+ + L L+D    P+ A  R  SPE+R MI AE+ +L + G I  S S WAA C  V+K DG +R+  D+R LN  L + SGGLGD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG L+++ R 
Sbjct:  157 VAACGGSELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRA 299          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 3.420e-30
Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 0
Query:   12 MRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            + L L++    P+ A  R  SPE+R MI AE+ +L + G I +S S WAA C  V+K DG +R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:    5 LELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRA 139          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.240e-30
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            V AC G  + L L+D    P+ A  R  SPE+R MI AE+ +L + G I  S S WAA C  V+K DG +R+  D+R LN  L + SGGLGD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG L+++ R 
Sbjct:  299 VAACGGTELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRA 441          
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Match: A0A6H5L7I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7I8_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.150e-29
Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    4 VPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESGTIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIFDEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC 146
            VPAC      L L++    P+ A  R  +P  R MI AE+ +L + G I +S S WAA C  V+K DG +R+  D+R LN  L S SGG GD+  IFD +     F+  DLASGF Q+ I   DR+ TAFR+ADG LW++ R 
Sbjct:  158 VPACINGEYELPLINEFCTPFAAKQRRFAPAGRRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGWGDMQTIFDGLKGKKYFTQLDLASGFRQMEIAEKDRYKTAFRDADGMLWEFTRA 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62769.13855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7W0_9PHAE1.680e-3246.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV6_9PHAE2.900e-3246.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE3.640e-3246.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE3.800e-3246.85RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KGF2_9PHAE9.070e-3246.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J659_9PHAE1.630e-3146.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAQ6_9PHAE8.670e-3146.15Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KIS6_9PHAE3.420e-3046.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBF4_9PHAE5.240e-3046.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7I8_9PHAE2.150e-2944.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 18..142
e-value: 3.7E-24
score: 87.2
NoneNo IPR availableGENE3D3.30.70.270coord: 91..118
e-value: 3.7E-24
score: 87.2
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 19..135
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 19..135
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 5..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62769contigH-elongata_contig62769:946..1386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62769.13855.1mRNA_H-elongata_contig62769.13855.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62769 946..1386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62769.13855.1 ID=prot_H-elongata_contig62769.13855.1|Name=mRNA_H-elongata_contig62769.13855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
YESVPACEGAPMRLELVDPNEKPYVAPMRYHSPEQRGMIHAEVVKLKESG
TIEESTSAWAANCSTVRKSDGIVRVVQDFRGLNSRLRSQSGGLGDLAHIF
DEMGKISCFSSCDLASGFLQLGIHADDRHLTAFRNADGKLWQYVRC*
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