prot_H-elongata_contig627.13848.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig627.13848.1
Unique Nameprot_H-elongata_contig627.13848.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length638
Homology
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BLAST of mRNA_H-elongata_contig627.13848.1 vs. uniprot
Match: D7FRX1_ECTSI (SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX1_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 9.130e-83
Identity = 320/649 (49.31%), Postives = 373/649 (57.47%), Query Frame = 0 
Query:    1 QALPEAERQTAEAILTGSVIEDNAAVEAIKTERRQRQLAHQSESEAAAKVFHPEAMPKGVVERYRSPEVAPLPQLYLIDAVISEEDKALLRKDGLDSCALRYSNPQFFYQEWYRLEIERQEKSLREKRXXXXXXXXXXXXXXXXXXXXXXXXEDNGTRSHRQPKKTISDWRGKLTIGAIGTG------------SVRNTAGDVSSLVGTEKVVVEKREAFGDKFYRQEEDFADTGYQVTLTD-----PSTGNNARADLKQLGALTAEDFERKPATSSADVRRLFRPQSVRGIPTTSTTMSSTPAVSRPXXXXXXXXXXQAPAAQPGTVASAVSPLPPPVXXXXXXIPSYTRPPSAAMTLGSNSARPAAPPVLPATDPVHQGAPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHTRIPSFQEPVLSFLPTSDGEVDAAPT---RPSFELWGMEQAPSSSLPMSEEITFDSRMALPEASPPPHFPAAKVSVIPFAGLTSDTPVPPPPPMQSRYPAPPXXXXAVARSQAGQPPLXXXXXXXXXXXGXXXXXXXXXXXGV--GPLNGRDSLLASITGGKKLKP---PSPDVSKEGGSG-NELLEAIRKGSQLKKVEKPQPAAVDTSNPILGGNPGINEILARRKYLEAES 623
            QALPEAE++TAEAI +G+ I+DNAAVEAIK ER   Q A Q+ESEAA+KVFHPEAMP+ +VERY SPEVA +P L+LIDAV+S E+K+LL KDGLDSCALRYSNPQFFYQEWYRLE+ERQEKS+REK XXXXXXXXXXXXXXXXXXX     ++   R+ R  +K++ DWRGKL +GA G G            S R  AGDVSSLVG +KVVV+KREA+ DKFYR+EE+ ADT YQ+  +D     PS G      L+QLGALT EDF RK  ++S   R LF+P S RG                 XXXXXXXXXX     +PG+            XXXXXX                                         XXXXXXXXX XXXXXXXXXXXXXXXX   +   PS+QEP+++  PT + E     T   RPS+E WG+   P+ +        F+   A P  +PP     A       A L         PP+Q               SQ GQPPL XXXXXX    G  XXXXXXXXX    G  + R  LLASIT GKKLK    P+P          NE                    AV+TSNP+ GGNPGINEILARRKYLEAES
Sbjct:   87 QALPEAEKRTAEAIGSGTGIDDNAAVEAIKAER---QHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXAGVEKDEERARAPRPARKSLGDWRGKLAVGAAGLGIGSXXXGVSRGASTRG-AGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDAGAAVPSGGQQ----LQQLGALTPEDFNRKLGSASEGGRLLFKPPSARGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------XXXXXXXXXAXXXXXXXXXXXXXXXXTQPYAPRPSYQEPIVT--PTLESEAMMEETHARRPSYESWGIPPEPAQN--------FEHGGA-PAVAPP-----AXXXXXXXAQL---------PPVQEA-------------SQFGQPPLPXXXXXXMPSMGHAXXXXXXXXXXXXSGGASMRGDLLASITNGKKLKKVERPAPVAXXXXXXXXNEXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAES 668
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig627.13848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRX1_ECTSI9.130e-8349.31SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..144
NoneNo IPR availableGENE3D1.20.58.1570coord: 543..636
e-value: 4.6E-8
score: 35.0
coord: 26..170
e-value: 6.5E-7
score: 31.2
IPR003124WH2 domainSMARTSM00246wh2_8coord: 544..561
e-value: 23.0
score: 13.2
coord: 571..588
e-value: 0.0039
score: 26.4
IPR003124WH2 domainPFAMPF02205WH2coord: 569..590
e-value: 9.0E-6
score: 25.3
coord: 543..560
e-value: 0.0041
score: 16.9
IPR003124WH2 domainPROSITEPS51082WH2coord: 544..561
score: 7.605
IPR003124WH2 domainPROSITEPS51082WH2coord: 571..588
score: 9.66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig627contigH-elongata_contig627:12702..19445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig627.13848.1mRNA_H-elongata_contig627.13848.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig627 12702..19445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig627.13848.1 ID=prot_H-elongata_contig627.13848.1|Name=mRNA_H-elongata_contig627.13848.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=638bp
QALPEAERQTAEAILTGSVIEDNAAVEAIKTERRQRQLAHQSESEAAAKV
FHPEAMPKGVVERYRSPEVAPLPQLYLIDAVISEEDKALLRKDGLDSCAL
RYSNPQFFYQEWYRLEIERQEKSLREKRQKKEERRRRKAAAKSAAARAGS
KEEDNGTRSHRQPKKTISDWRGKLTIGAIGTGSVRNTAGDVSSLVGTEKV
VVEKREAFGDKFYRQEEDFADTGYQVTLTDPSTGNNARADLKQLGALTAE
DFERKPATSSADVRRLFRPQSVRGIPTTSTTMSSTPAVSRPPPPQQRPPP
PQAPAAQPGTVASAVSPLPPPVSPPLPPIPSYTRPPSAAMTLGSNSARPA
APPVLPATDPVHQGAPPLPPPPPPTVRPPPPQKAPPPRAAPPPPPPPSHT
RIPSFQEPVLSFLPTSDGEVDAAPTRPSFELWGMEQAPSSSLPMSEEITF
DSRMALPEASPPPHFPAAKVSVIPFAGLTSDTPVPPPPPMQSRYPAPPPV
PPAVARSQAGQPPLPPPMPPPLPVPGGHPPAPPPPPPGVGPLNGRDSLLA
SITGGKKLKPPSPDVSKEGGSGNELLEAIRKGSQLKKVEKPQPAAVDTSN
PILGGNPGINEILARRKYLEAESEDSDSEEDSDWEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003124WH2_dom