mRNA_H-elongata_contig62669.13841.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig62669.13841.1
Unique NamemRNA_H-elongata_contig62669.13841.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: D7FS87_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS87_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 3.400e-105
Identity = 192/379 (50.66%), Postives = 228/379 (60.16%), Query Frame = 1
Query:    1 GSTSTVWMVVDVDTLIIVAVKEMIVNDSKQSAVLRHELGVLHPQLQPDI--RARRVRGPPYRRARAPVALRSLPKSPPLTAAAVGANIPVGRAPRARRPRGHNSSSSSSGGVPVGDQALRDHH-----SPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEE----SGSGLGPEHFIP-------------------------------PEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGAKLADFGSTI--KEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            GSTSTVW VVD++TL +VAVKEMIV DSKQ  +LRHEL VLHPQLQP +  + +R+ G   R + APV            AA+ G N P                                        PCP+MPRY+GSFV+ D  GR  VSIV+E++ GVDL RWIEE    SG G G                                     PE WL  VCRD++EALRYLHER  IHRDVKPANVLL PGGA+L DFGSTI  +EDE  G RMHGT+RFMSPERL  R YRPSSDLWA GLT+A+ ALGENP+PH + +F+A  HA  AF+MV +HP ++ LSP LLDFLR VLVADP++RPT E+ML HP++
Sbjct:   72 GSTSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPVG----------DAASSGTNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGGSSGEGEGRREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPEMWLPRVCRDMLEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDDREDE-CGGRMHGTVRFMSPERLCARPYRPSSDLWAAGLTVASAALGENPVPHSANKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPYL 439          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A6H5K7A9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A9_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.740e-104
Identity = 197/374 (52.67%), Postives = 236/374 (63.10%), Query Frame = 1
Query:    1 GSTSTVWMVVDVDTLIIVAVKEMIVNDSKQSAVLRHELGVLHPQLQPDI--RARRVRGPPYRRARAPVALRSLPKSPPLTAAAVGANIP-VGRAPRARRPRGHNSSSSSSGG----VPVGDQALRDHHSPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEE----SGSGLGPEHFIP--------------------------PEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGAKLADFGSTI--KEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            GS+STVW VVD++TL +VAVKEMIV DSKQ  +LRHEL VLHPQLQP +  + +R+ G   R + AP++           AA+ G N P +             S   S GG          A      PCP+MPRY+GSFV+ D  GR  VSIV+E++ GVDL RWIEE    SG G G                                PE WL+ VCRD++EALRYLHER  IHRDVKPANVLL PGGA+L DFGSTI  +EDE  G RMHGT+RFMSPERL  R Y PSSDLWA GLT+A+ ALGENP+PH +T+F+A  HA  AF+MV +HP ++ LSP LLDFLR VLVADP++RPT E+ML HPFV
Sbjct:   73 GSSSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPISGAGAGD-----AASSGTNTPTIAXXXXXXXXSARRSGKKSLGGGKSVAAASTSAPVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGGSSGDGEGRREXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPELWLSRVCRDILEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDGREDE-CGGRMHGTVRFMSPERLCARPYWPSSDLWAAGLTVASAALGENPVPHSATKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPFV 440          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A2R5H0J7_9STRA (Mitogen-activated protein kinase kinase 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H0J7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.660e-26
Identity = 73/215 (33.95%), Postives = 113/215 (52.56%), Query Frame = 1
Query:  370 CPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGST--IKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            CP +  ++G+F T+ +     +SI +E++    LH  IE+ G+         PE  +A +    +  L YL   +R+HRDVKP N+L  + G  KL DFGS+  ++          GT ++MSPER+  + Y  +SD+W+ GL I    LGE P P C+T  D V+  + A       P A+R SPE  DF++  L  DP +R   E ++  P++
Sbjct:  123 CPALVGFYGAFFTECS-----ISIAVEYMDQGCLHSVIEKQGA--------IPEPAVAAIAYQALWGLGYLKHEKRVHRDVKPQNILCNSRGEVKLTDFGSSRDLENSVNVCQTFVGTFKYMSPERVQSQAYSYASDIWSLGLVILECLLGEFPYPDCNTYIDMVQTILEA---PIPLPPANRFSPEFSDFIQCCLHKDPSQRVFPEFLIGAPWL 321          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A2I0B120_9ASPA (Mitogen-activated protein kinase kinase kinase YODA n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B120_9ASPA)

HSP 1 Score: 118 bits (295), Expect = 1.810e-26
Identity = 83/231 (35.93%), Postives = 121/231 (52.38%), Query Frame = 1
Query:  316 SSGGVPVGDQALRDHHSPCPHMPRYFGSFVTQDASGRSCV-SIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGAKLADFGSTIKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            SS  V   ++A+      CPH+   FG  V+++ SG   + ++ LE+  G D++  I  SG GL       PE+ +    R ++E LR++H R  +H D+KP N+LL  G AK+ADFG +  E       + GT  +M+PE L  ++Y   +D+WA G T A    G  P P   TE  AV   + + + +   P A  +S E  DFL    V DP +R TAE +L HPFV
Sbjct:   38 SSASVLRREEAIISDLQGCPHIIGCFGHQVSEEPSGEPRLYNLFLEYAGGGDIYGLIRSSG-GL-------PEEAVRRHVRSILEGLRHIHARGYVHCDIKPQNILLVGGEAKIADFGLSNGE-------IRGTPLYMAPEALLRKEYEAPADIWALGCTAAEMFSGRRPWPE--TEVCAVIRRIGSSEEMPEIPPA--MSAEGKDFLSRCFVKDPRERWTAEMLLSHPFV 249          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A4D9DG65_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG65_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.160e-26
Identity = 73/217 (33.64%), Postives = 113/217 (52.07%), Query Frame = 1
Query:  370 CPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGST--IKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAH--PRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            CP++  ++  F       R  V++++E++ G  L   +   G           E  LA + R+++  L YLHER++IHRD+KP N+L+   G  K+ADFG +  +           GT+ +MSPER+   +Y   +D+W+ GL++ A ALG  P     +     E   A  D  +    P   R SPE  DFLR+ L+ DP +RP+AE +L HP+V
Sbjct:  552 CPYIVSFYDIFADPV---RGTVNLLVEYMDGGSLEDLVRAGGCD--------DEAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPFERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKDPSERPSAETLLFHPYV 757          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A022QK86_ERYGU (Protein kinase domain-containing protein n=4 Tax=Lamiales TaxID=4143 RepID=A0A022QK86_ERYGU)

HSP 1 Score: 115 bits (288), Expect = 7.480e-26
Identity = 73/220 (33.18%), Postives = 112/220 (50.91%), Query Frame = 1
Query:  364 SPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLH-ERRRIHRDVKPANVLLAPGG-AKLADFG--STIKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPI--PHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            S CP++   + SF    A     +SI+LE++ G  L  ++++          I PEQ+LA VC+ +++ L YLH E+  IHRD+KP+N+L+   G  K+ DFG  + +    G  +   GT  +MSPER+    Y   SD+W+ GL     A G+ P   P      +  E   A  D  A    + + SPE   F+   +  DP  RP+A E++ HPF+
Sbjct:  121 SQCPYVVVCYQSFYDNGA-----ISIILEYMDGGSLDDFLKKVN--------IIPEQYLAAVCKQVLKGLWYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAILASTSGLANTFVGTYNYMSPERILGGNYGYKSDIWSLGLVFLECATGQFPYTAPQPEGWVNVYELMEAIVDQPAPRAPSDQFSPEFCSFISACVQKDPKDRPSANELMAHPFI 327          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: W7U1J4_9STRA (Mitogen-activated protein kinase kinase 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1J4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.090e-25
Identity = 72/217 (33.18%), Postives = 113/217 (52.07%), Query Frame = 1
Query:  370 CPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGST--IKEDEGAGHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAH--PRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            CP++  ++  F       R  V++++E++ G  L   +   G           E  LA + R+++  L YLHER++IHRD+KP N+L+   G  K+ADFG +  +           GT+ +MSPER+   +Y   +D+W+ GL++ A ALG  P     +     E   A  D  +    P   R SPE  DFLR+ L+ +P +RP+AE +L HP+V
Sbjct:  823 CPYIVSFYDVFADPV---RGTVNLLVEYMDGGSLEDLVRAGGCD--------DEAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPYERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKNPSERPSAENLLFHPYV 1028          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: E1ZE46_CHLVA (Protein kinase domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE46_CHLVA)

HSP 1 Score: 114 bits (286), Expect = 1.630e-25
Identity = 69/210 (32.86%), Postives = 112/210 (53.33%), Query Frame = 1
Query:  385 RYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGGA-KLADFGSTIKEDEGAG--HRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            R+FG++ + D   R  +++VLE++ G  L   ++             PE  LA +   ++ AL Y+H R  +HRD+KPAN+L++  G  K++DFG +   D      H   GT+ +MSPER+    Y   +D+WA GLT+   A G+ P          ++  +   +     P A + SPEL DF+   +  DP +RPTAE++++HPF+
Sbjct:   89 RFFGAYHSAD---RGQIAVVLEYMDGGSLADVVQRVQR--------IPEPVLAGITARILPALAYMHSRHMVHRDIKPANILMSTDGQPKVSDFGISAFMDNTIAQCHTFLGTVTYMSPERINGEAYSFPADIWALGLTLLECATGKYPY---DASGGTIQLMIQLMEEDCPLPPAGQCSPELRDFVAQCMRKDPWQRPTAEQLMQHPFI 284          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A7S2GCB3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCB3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.420e-25
Identity = 82/253 (32.41%), Postives = 128/253 (50.59%), Query Frame = 1
Query:  346 ALRDHHSPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLLAPGG-AKLADFGS--------------TIKEDEGAG----------HRMH--------GTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            AL  +     +M  Y G+FV+ + +     S+++E +   DL  W+E        +H +P E++LA +   + +AL  L+E++R+HRDVKP NVL++  G  KL+DFG                I+ + G G             H        GT R+MSPERL   +Y  S+D+WA GLT+A   LGE P     + +  ++++      V    +   LS +L DF+   L  DP++RP A++ML+HPFV
Sbjct:  439 ALDSNQKGSSYMVNYHGAFVSDEDNK---ASLMVEFMANGDLESWVEA-------KHELP-EEFLAVIAYQVCKALASLNEKKRMHRDVKPGNVLISSTGQVKLSDFGMCADVKGATDTGCDMNIRPNAGVGFASGSTILSRQERHSETLKDFVGTYRYMSPERLTADEYSYSADVWALGLTLATCVLGECPFSKDCSFWQLLQNSELPETEVL---KRQDLSTDLRDFITTCLKKDPNERPEAKDMLQHPFV 677          
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Match: A0A7S2BNN1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNN1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.740e-25
Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = 1
Query:  364 SPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDLHRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPANVLL-APGGAKLADFGSTIKEDEGA-GHRMHGTIRFMSPERLWERQYRPSSDLWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPELLDFLRVVLVADPDKRPTAEEMLEHPFV 1005
            SPCP++  +F +FV  ++     V++V+E++ G  L   +E  G           EQ LA +   +++ L +LH  R++HRD+KP N+L+ + G  K+ADFG   + D  A  H   G++ +MSPER+    Y  S+D+WA GL++ A ALG  PI    T + A+ HA+         P  +  S      L  +L  DP +R  A+++++HPF+
Sbjct:   52 SPCPYIVSFFDAFVNPNSGS---VALVVEYMNGGSLQDLVELGGCS--------DEQLLASIAVQVLKGLEFLHNNRKMHRDIKPGNILINSRGECKIADFGLYRELDTSAVAHTFIGSLGYMSPERITGSDYGISADIWAVGLSLMAVALGRYPIEG-GTGYWALLHALTDRPPPTL-PEDAGFSDGFQGLLSCMLNQDPTQRWRADQLVDHPFL 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62669.13841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS87_ECTSI3.400e-10550.66Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K7A9_9PHAE6.740e-10452.67Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A2R5H0J7_9STRA1.660e-2633.95Mitogen-activated protein kinase kinase 3 n=1 Tax=... [more]
A0A2I0B120_9ASPA1.810e-2635.93Mitogen-activated protein kinase kinase kinase YOD... [more]
A0A4D9DG65_9STRA2.160e-2633.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A022QK86_ERYGU7.480e-2633.18Protein kinase domain-containing protein n=4 Tax=L... [more]
W7U1J4_9STRA1.090e-2533.18Mitogen-activated protein kinase kinase 2 n=2 Tax=... [more]
E1ZE46_CHLVA1.630e-2532.86Protein kinase domain-containing protein n=1 Tax=C... [more]
A0A7S2GCB3_9STRA3.420e-2532.41Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2BNN1_9STRA3.740e-2533.33Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62669contigH-elongata_contig62669:353..1357 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue6.7e-83
Seed eggNOG ortholog2880.D7FS87
EggNOG free text desc.MAP kinase kinase activity
EggNOG OGsKOG0581@1,KOG0581@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-05_004950.1
Exons1
Model size1005
Cds size984
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931009.4895692-UTR-H-elongata_contig62669:352..3731622931009.4895692-UTR-H-elongata_contig62669:352..373Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig62669 353..373 +
1691679660.7000682-UTR-H-elongata_contig62669:352..3731691679660.7000682-UTR-H-elongata_contig62669:352..373Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig62669 353..373 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931009.5109808-CDS-H-elongata_contig62669:373..13571622931009.5109808-CDS-H-elongata_contig62669:373..1357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig62669 374..1357 +
1691679660.7133656-CDS-H-elongata_contig62669:373..13571691679660.7133656-CDS-H-elongata_contig62669:373..1357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig62669 374..1357 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62669.13841.1prot_H-elongata_contig62669.13841.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig62669 374..1357 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig62669.13841.1

>prot_H-elongata_contig62669.13841.1 ID=prot_H-elongata_contig62669.13841.1|Name=mRNA_H-elongata_contig62669.13841.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=328bp
MVVDVDTLIIVAVKEMIVNDSKQSAVLRHELGVLHPQLQPDIRARRVRGP
PYRRARAPVALRSLPKSPPLTAAAVGANIPVGRAPRARRPRGHNSSSSSS
GGVPVGDQALRDHHSPCPHMPRYFGSFVTQDASGRSCVSIVLEHIPGVDL
HRWIEESGSGLGPEHFIPPEQWLACVCRDLVEALRYLHERRRIHRDVKPA
NVLLAPGGAKLADFGSTIKEDEGAGHRMHGTIRFMSPERLWERQYRPSSD
LWATGLTIAATALGENPIPHCSTEFDAVEHAMAAFDMVAAHPRASRLSPE
LLDFLRVVLVADPDKRPTAEEMLEHPFV
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mRNA from alignment at H-elongata_contig62669:353..1357+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig62669.13841.1 ID=mRNA_H-elongata_contig62669.13841.1|Name=mRNA_H-elongata_contig62669.13841.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1005bp|location=Sequence derived from alignment at H-elongata_contig62669:353..1357+ (Himanthalia elongata Himel1 dioecious)
GGGTCTACCAGTACGGTTTGGATGGTGGTCGACGTCGACACCCTGATCAT CGTCGCTGTCAAAGAGATGATCGTGAACGATTCCAAGCAGAGTGCCGTCC TGAGGCACGAGCTGGGCGTCCTCCATCCGCAGCTGCAGCCTGACATCCGG GCGAGGAGAGTGCGTGGCCCTCCCTACCGGAGGGCCAGGGCCCCGGTGGC CCTTAGGAGCTTGCCGAAGTCGCCGCCGTTGACCGCCGCCGCCGTGGGAG CTAATATCCCCGTCGGCCGCGCGCCACGCGCTAGGCGTCCTCGTGGTCAT AATAGCAGCAGTAGTAGTAGCGGTGGCGTGCCCGTGGGGGATCAAGCTTT GCGCGATCACCACAGCCCGTGCCCCCACATGCCCCGGTACTTTGGGTCGT TTGTCACCCAGGACGCCAGCGGCAGGTCGTGCGTCAGCATTGTGCTCGAG CACATCCCAGGGGTAGACCTCCATCGCTGGATCGAGGAGTCGGGGTCGGG ATTGGGGCCGGAGCATTTTATACCCCCCGAGCAGTGGTTAGCCTGCGTCT GCCGCGACCTGGTGGAGGCGCTTCGGTACCTGCACGAGCGACGCCGAATA CACCGGGACGTAAAGCCGGCGAATGTGCTGCTTGCTCCAGGGGGTGCGAA GCTGGCGGACTTCGGAAGCACGATTAAGGAGGACGAAGGCGCGGGGCATC GGATGCACGGGACCATCAGGTTCATGAGCCCCGAGCGCCTGTGGGAGCGG CAGTACCGGCCGAGCTCGGACCTCTGGGCGACCGGCCTGACGATCGCGGC AACGGCGCTTGGAGAGAATCCGATACCACACTGCTCGACGGAGTTTGACG CGGTTGAGCACGCCATGGCCGCGTTCGACATGGTTGCCGCTCATCCTCGA GCCTCTCGGCTATCTCCAGAGCTGCTCGACTTCCTTCGGGTCGTGTTGGT GGCGGACCCGGATAAGCGCCCCACTGCGGAAGAGATGCTCGAGCACCCGT TCGTC
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Coding sequence (CDS) from alignment at H-elongata_contig62669:353..1357+

>mRNA_H-elongata_contig62669.13841.1 ID=mRNA_H-elongata_contig62669.13841.1|Name=mRNA_H-elongata_contig62669.13841.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1968bp|location=Sequence derived from alignment at H-elongata_contig62669:353..1357+ (Himanthalia elongata Himel1 dioecious)
ATGGTGGTCGACGTCGACACCCTGATCATCGTCGCTGTCAAAGAGATGAT
CGTGAACGATTCCAAGCAGAGTGCCGTCCTGAGGCACGAGCTGGGCGTCC
TCCATCCGCAGCTGCAGCCTGACATCCGGGCGAGGAGAGTGCGTGGCCCT
CCCTACCGGAGGGCCAGGGCCCCGGTGGCCCTTAGGAGCTTGCCGAAGTC
GCCGCCGTTGACCGCCGCCGCCGTGGGAGCTAATATCCCCGTCGGCCGCG
CGCCACGCGCTAGGCGTCCTCGTGGTCATAATAGCAGCAGTAGTAGTAGC
GGTGGCGTGCCCGTGGGGGATCAAGCTTTGCGCGATCACCACAGCCCGTG
CCCCCACATGCCCCGGTACTTTGGGTCGTTTGTCACCCAGGACGCCAGCG
GCAGGTCGTGCGTCAGCATTGTGCTCGAGCACATCCCAGGGGTAGACCTC
CATCGCTGGATCGAGGAGTCGGGGTCGGGATTGGGGCCGGAGCATTTTAT
ACCCCCCGAGCAGTGGTTAGCCTGCGTCTGCCGCGACCTGGTGGAGGCGC
TTCGGTACCTGCACGAGCGACGCCGAATACACCGGGACGTAAAGCCGGCG
AATGTGCTGCTTGCTCCAGGGGGTGCGAAGCTGGCGGACTTCGGAAGCAC
GATTAAGGAGGACGAAGGCGCGGGGCATCGGATGCACGGGACCATCAGGT
TCATGAGCCCCGAGCGCCTGTGGGAGCGGCAGTACCGGCCGAGCTCGGAC
CTCTGGGCGACCGGCCTGACGATCGCGGCAACGGCGCTTGGAGAGAATCC
GATACCACACTGCTCGACGGAGTTTGACGCGGTTGAGCACGCCATGGCCG
CGTTCGACATGGTTGCCGCTCATCCTCGAGCCTCTCGGCTATCTCCAGAG
CTGCTCGACTTCCTTCGGGTCGTGTTGGTGGCGGACCCGGATAAGCGCCC
CACTGCGGAAGAGATGCTCGAGCACCCGTTCGTCATGGTGGTCGACGTCG
ACACCCTGATCATCGTCGCTGTCAAAGAGATGATCGTGAACGATTCCAAG
CAGAGTGCCGTCCTGAGGCACGAGCTGGGCGTCCTCCATCCGCAGCTGCA
GCCTGACATCCGGGCGAGGAGAGTGCGTGGCCCTCCCTACCGGAGGGCCA
GGGCCCCGGTGGCCCTTAGGAGCTTGCCGAAGTCGCCGCCGTTGACCGCC
GCCGCCGTGGGAGCTAATATCCCCGTCGGCCGCGCGCCACGCGCTAGGCG
TCCTCGTGGTCATAATAGCAGCAGTAGTAGTAGCGGTGGCGTGCCCGTGG
GGGATCAAGCTTTGCGCGATCACCACAGCCCGTGCCCCCACATGCCCCGG
TACTTTGGGTCGTTTGTCACCCAGGACGCCAGCGGCAGGTCGTGCGTCAG
CATTGTGCTCGAGCACATCCCAGGGGTAGACCTCCATCGCTGGATCGAGG
AGTCGGGGTCGGGATTGGGGCCGGAGCATTTTATACCCCCCGAGCAGTGG
TTAGCCTGCGTCTGCCGCGACCTGGTGGAGGCGCTTCGGTACCTGCACGA
GCGACGCCGAATACACCGGGACGTAAAGCCGGCGAATGTGCTGCTTGCTC
CAGGGGGTGCGAAGCTGGCGGACTTCGGAAGCACGATTAAGGAGGACGAA
GGCGCGGGGCATCGGATGCACGGGACCATCAGGTTCATGAGCCCCGAGCG
CCTGTGGGAGCGGCAGTACCGGCCGAGCTCGGACCTCTGGGCGACCGGCC
TGACGATCGCGGCAACGGCGCTTGGAGAGAATCCGATACCACACTGCTCG
ACGGAGTTTGACGCGGTTGAGCACGCCATGGCCGCGTTCGACATGGTTGC
CGCTCATCCTCGAGCCTCTCGGCTATCTCCAGAGCTGCTCGACTTCCTTC
GGGTCGTGTTGGTGGCGGACCCGGATAAGCGCCCCACTGCGGAAGAGATG
CTCGAGCACCCGTTCGTC
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