prot_H-elongata_contig62626.13837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62626.13837.1
Unique Nameprot_H-elongata_contig62626.13837.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig62626.13837.1 vs. uniprot
Match: D8LIW6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW6_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 6.360e-55
Identity = 111/199 (55.78%), Postives = 132/199 (66.33%), Query Frame = 0
Query:    1 YLGLTTILKVPELKAQIAEGDVAVEDLENAWLEACAVEGEGTIDPVNACGS-----YRRSWGVCSELDFNGFVRFLGLCEAKAPLPKASNASLEARSHLGVDIGRDLLVARQRMAGLLRATLTVHQRDNMSENEEGHHSRDPVNLRGEELHSVMVRAALEGGLAHHTPETLRELTRTGVYRDAMKGGKSDRDLKKVCQR 194
            ++GL ++LK+ E+KAQIAEGDV VEDLE+AWLEACAV+G  ++DP +  G       R SWGVC+EL F GFV FL LCE KA L      + EA S      GRDL+ AR RM GLLRATLTVHQR    E EE  H  D     GE LHS MVRAA+E GLAHH P+ L EL RTGVY+++ +G + DRD KK   R
Sbjct:   38 FVGLRSVLKLKEVKAQIAEGDVYVEDLESAWLEACAVKGVSSVDPEDGKGGTHHVHQRSSWGVCTELSFEGFVHFLRLCEEKASLSTDLATATEA-SPKDPATGRDLVAARHRMVGLLRATLTVHQRGGGGEEEEIEHPADLNAPLGETLHSSMVRAAVEEGLAHHNPDVLHELMRTGVYKESEEGVQLDRDEKKASLR 235          
BLAST of mRNA_H-elongata_contig62626.13837.1 vs. uniprot
Match: A0A6H5L494_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L494_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.510e-18
Identity = 49/86 (56.98%), Postives = 54/86 (62.79%), Query Frame = 0
Query:  109 MAGLLRATLTVHQRDNMSENEEGHHSRDPVNLRGEELHSVMVRAALEGGLAHHTPETLRELTRTGVYRDAMKGGKSDRDLKKVCQR 194
            M GLLRATLTVHQR    E EE  H  D     GE LH+ MVRAA+E GLAHH    L EL RTGVY++   G + DRD KK C R
Sbjct:    1 MVGLLRATLTVHQRGGGGEEEENEHPADRNAPLGETLHTSMVRAAVEEGLAHHNTVMLHELMRTGVYKEPGDGVQLDRDEKKACLR 86          
BLAST of mRNA_H-elongata_contig62626.13837.1 vs. uniprot
Match: A0A835YKI0_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.460e-12
Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 0
Query:    2 LGLTTILKVPELKAQIAEGDVAVEDLENAWLEACAVEGEGTIDPVNACGSYRRSWGVCSELDFNGFVRFLGLCEAKAPLPKASNASLEARSHLGVDIGR----------DLLVARQRMAGLLRATLTVHQR 122
            L    +LKV E+ +Q+A GD+  ED+E  WLEA +  G  +++P    G    SWGV + L+F GF+  + +CE K     A    + A     V +             + +ARQ +AGL+RATL +H R
Sbjct:   63 LDFDALLKVDEVASQLAAGDLCTEDVEAMWLEAVSCPGATSLEPGAEMGP--SSWGVRTPLNFRGFLELIRVCEEKTASLGAQPGEVAATYERPVQLVAGAAATQRARWQIAMARQHLAGLMRATLVLHGR 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62626.13837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LIW6_ECTSI6.360e-5555.78EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L494_9PHAE3.510e-1856.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKI0_9STRA1.460e-1234.35EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62626contigH-elongata_contig62626:112..1988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62626.13837.1mRNA_H-elongata_contig62626.13837.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62626 112..1988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62626.13837.1 ID=prot_H-elongata_contig62626.13837.1|Name=mRNA_H-elongata_contig62626.13837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
YLGLTTILKVPELKAQIAEGDVAVEDLENAWLEACAVEGEGTIDPVNACG
SYRRSWGVCSELDFNGFVRFLGLCEAKAPLPKASNASLEARSHLGVDIGR
DLLVARQRMAGLLRATLTVHQRDNMSENEEGHHSRDPVNLRGEELHSVMV
RAALEGGLAHHTPETLRELTRTGVYRDAMKGGKSDRDLKKVCQR
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