prot_H-elongata_contig62575.13830.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62575.13830.1
Unique Nameprot_H-elongata_contig62575.13830.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length423
Homology
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BLAST of mRNA_H-elongata_contig62575.13830.1 vs. uniprot
Match: A0A6H5JBU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU0_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.180e-29
Identity = 97/273 (35.53%), Postives = 130/273 (47.62%), Query Frame = 0 
Query:   80 GMAVTAAAV--ASVKGPAEAQAAVSALAAWDILAAAEEAGVFA-VHVELAAVFGRGGDWYATNKTVVLTRNGTDKSAYSSSLPSWPSAYMASGRVGDFDGQDIMFGALGWRLEEDFRAKLDEIAVADVKIYHKPYAGVTGVVNSSFSGQSAPLL--QGTLCKRGSNGVDQHVLGKEESRTIRALFMPYTEQRSHVHRSAAPPIGSDSNVPADEWFPTTEREQAVIVPPSRACVVSEMEDQEWWGDLEEKERGRGMADVHALSRLPNWNPGEWR 347
            GM +TAAA   A+ + PAEAQ A+SALAAW+++   E   +   + VE+ A FG  GDWY  +KT+ LT +GT  S          SA ++S     FD          W+   D  +KLDE   ADV++Y        G  ++    Q A LL  +GTLCKR S    +    +    T++A   PY E+                        P    E   I P   + VVSE+ D+EWW   EE+E GRGM  V AL RLP W PG+W+
Sbjct:  165 GMEMTAAAATAATAENPAEAQMAISALAAWNLMTTRETPAMLPMIRVEVGAAFGYHGDWYTASKTIPLTSDGTGHS----------SALLSSAT---FD----------WQPAPDVWSKLDEPMAADVRVY--------GTASTPTEEQEAGLLLLRGTLCKRASGFGGRSTRDETTQGTMKAALTPYAER-----------------------LPAVAAEAVAISPSRPSVVVSEIRDEEWWRAREEEESGRGMDAVDALPRLPRWKPGDWK 383
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62575.13830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBU0_9PHAE4.180e-2935.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62575contigH-elongata_contig62575:1701..2969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62575.13830.1mRNA_H-elongata_contig62575.13830.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62575 1480..3477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62575.13830.1 ID=prot_H-elongata_contig62575.13830.1|Name=mRNA_H-elongata_contig62575.13830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=423bp
MRQISGAQVEISVRKEEKNPHSPLAYVVDVSMLLQVALEGGARKQDRRQD
GEANRVSSEGLKVASGNESPISMLDRQKIGMAVTAAAVASVKGPAEAQAA
VSALAAWDILAAAEEAGVFAVHVELAAVFGRGGDWYATNKTVVLTRNGTD
KSAYSSSLPSWPSAYMASGRVGDFDGQDIMFGALGWRLEEDFRAKLDEIA
VADVKIYHKPYAGVTGVVNSSFSGQSAPLLQGTLCKRGSNGVDQHVLGKE
ESRTIRALFMPYTEQRSHVHRSAAPPIGSDSNVPADEWFPTTEREQAVIV
PPSRACVVSEMEDQEWWGDLEEKERGRGMADVHALSRLPNWNPGEWRTLQ
EGRRKQREKDERERVKKAAHRRERTRAASGDTIGVRSKERLGGNSRVVGV
VRRLWGAAAREWERFRRRFCTR*
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