prot_H-elongata_contig62392.13810.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62392.13810.1
Unique Nameprot_H-elongata_contig62392.13810.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
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BLAST of mRNA_H-elongata_contig62392.13810.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 5.030e-12
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0 
Query:    7 LQYSTRHIQSLCAHGKELGDASMSKEAPIVKRLLEEFIFR 46
            LQ +TR +QSLCAHGK++GDA+MSKEAP VK+LLEEFIFR
Sbjct: 1270 LQQTTRQMQSLCAHGKDVGDAAMSKEAPAVKKLLEEFIFR 1309
[Close]
BLAST of mRNA_H-elongata_contig62392.13810.1 vs. uniprot
Match: A0A8K1C9Z7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9Z7_PYTOL)

HSP 1 Score: 50.4 bits (119), Expect = 6.560e-6
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:    1 MCVFSYLQYSTRHIQSLCAHGKELGDASMSKEAPIVKRLLEEFIFR 46
            M + S +Q +TR +Q LCAHGK + DA+   + P+VK+LLE FI+R
Sbjct: 1226 MKLISEVQVATRRMQVLCAHGKLIKDATAGAQVPMVKKLLERFIYR 1271
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62392.13810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0C8_ECTSI5.030e-1277.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1C9Z7_PYTOL6.560e-650.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62392contigH-elongata_contig62392:1127..1267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62392.13810.1mRNA_H-elongata_contig62392.13810.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62392 1127..1267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62392.13810.1 ID=prot_H-elongata_contig62392.13810.1|Name=mRNA_H-elongata_contig62392.13810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
MCVFSYLQYSTRHIQSLCAHGKELGDASMSKEAPIVKRLLEEFIFR*
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