prot_H-elongata_contig62329.13806.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62329.13806.1
Unique Nameprot_H-elongata_contig62329.13806.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A6H5JII2_9PHAE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JII2_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 4.880e-77
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLD+DICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVV+YL GC+VDGA+VVTTPQ
Sbjct:  107 QVGLLDIDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVKYLGGCNVDGAVVVTTPQ 223          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A7S2UWA7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWA7_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.600e-68
Identity = 100/117 (85.47%), Postives = 114/117 (97.44%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLD+DICGPSVPRMLGLTG+EVHQSS+GWSPV+V+D LGVMSIGFMLP QD+AVIWRGP+KNGLI+QFLTDVDWGQLDYLVIDTPPGTSDEH+S+V+YL+GC+ DGA+VVTTPQ
Sbjct:   95 QVGLLDLDICGPSVPRMLGLTGQEVHQSSTGWSPVYVSDLLGVMSIGFMLPGQDDAVIWRGPRKNGLIRQFLTDVDWGQLDYLVIDTPPGTSDEHISIVQYLKGCAADGAVVVTTPQ 211          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: W7TWQ3_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 9.250e-66
Identity = 97/126 (76.98%), Postives = 115/126 (91.27%), Query Frame = 0
Query:    3 CGARNCHGQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYL-EGCSVDGAIVVTTPQ 127
            C A+    QVGLLDVDICGPSVPR++GLTG+EVHQS++GWSPV+V D LGVMSIGFMLP  D+AVIWRGP+KNGLIKQFLTDVDWG+LDYL+IDTPPGTSDEH+S+++YL +GC +DGA+VVTTPQ
Sbjct:   93 CLAQQYGLQVGLLDVDICGPSVPRVMGLTGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPNADDAVIWRGPRKNGLIKQFLTDVDWGELDYLIIDTPPGTSDEHLSIIQYLKDGCGIDGAVVVTTPQ 218          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A6V1SZ98_HETAK (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SZ98_HETAK)

HSP 1 Score: 212 bits (539), Expect = 1.270e-65
Identity = 97/117 (82.91%), Postives = 110/117 (94.02%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLDVDICGPSVP MLGL G+EVHQS+SGWSPV+V D LGVMSIGFMLP+QD+AVIWRGP+KNGLI+QFLTDVDWG LDYLV+DTPPGTSDEH+S+V+YL+G  VDGA+VVTTPQ
Sbjct:   94 QVGLLDVDICGPSVPTMLGLVGQEVHQSASGWSPVYVGDRLGVMSIGFMLPRQDDAVIWRGPRKNGLIRQFLTDVDWGHLDYLVVDTPPGTSDEHISIVQYLKGAGVDGAVVVTTPQ 210          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A835ZEQ2_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.430e-65
Identity = 96/117 (82.05%), Postives = 110/117 (94.02%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLDVDICGPSVPRMLGLTG+EVHQS++GWSPV+V D LGVMSIGFMLP  D+AVIWRGP+KNGLIKQFLTDVDWG LDYLVIDTPPGTSDEH+S ++YL+GC+VDGA++V+T Q
Sbjct:   89 QVGLLDVDICGPSVPRMLGLTGQEVHQSAAGWSPVYVEDNLGVMSIGFMLPGSDDAVIWRGPRKNGLIKQFLTDVDWGTLDYLVIDTPPGTSDEHISTIQYLKGCNVDGAVIVSTNQ 205          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A7S0SUL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUL6_9STRA)

HSP 1 Score: 206 bits (523), Expect = 3.870e-65
Identity = 93/117 (79.49%), Postives = 107/117 (91.45%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLDVDICGPS+PRMLGL G+EVHQS+SGWSPV+V D L VMSIGFMLP  D+AVIWRGP+KNGLIKQFLTDV W +LDYL+IDTPPGTSDEH+S+V+YL+  S+DGA+VVTTPQ
Sbjct:  103 QVGLLDVDICGPSIPRMLGLVGQEVHQSASGWSPVYVEDNLAVMSIGFMLPSSDDAVIWRGPRKNGLIKQFLTDVVWNELDYLIIDTPPGTSDEHISIVQYLQSASIDGAVVVTTPQ 219          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A7S3H9T7_9STRA (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9T7_9STRA)

HSP 1 Score: 205 bits (522), Expect = 7.980e-63
Identity = 90/117 (76.92%), Postives = 108/117 (92.31%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLD+DICGPS+PRMLGL G EVHQS+SGWSPV+V D LGVMSIGFMLP +D+A+IWRGP+KNGLIKQFLTDV W +LDYL+IDTPPGTSDEH+S+V+YL+  ++DGA+V+TTPQ
Sbjct:  104 QVGLLDIDICGPSIPRMLGLVGHEVHQSASGWSPVYVDDNLGVMSIGFMLPSKDDAIIWRGPRKNGLIKQFLTDVVWNELDYLIIDTPPGTSDEHISIVQYLKSANIDGAVVITTPQ 220          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: T0RQD5_SAPDV (Cytosolic Fe-S cluster assembly factor NUBP1 homolog n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RQD5_SAPDV)

HSP 1 Score: 203 bits (517), Expect = 1.220e-62
Identity = 92/117 (78.63%), Postives = 108/117 (92.31%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLDVDI GPSVPRMLGL+G+EVHQS+ GWSPV+V D LGVMSIGFMLP QD+A+IWRGPKK+GLIKQFLTDV WG+LDYL+IDTPPGTSDEH+S+V+Y++   +DGA+VVTTPQ
Sbjct:   88 QVGLLDVDITGPSVPRMLGLSGQEVHQSNDGWSPVYVDDNLGVMSIGFMLPNQDDAIIWRGPKKSGLIKQFLTDVTWGELDYLIIDTPPGTSDEHISIVQYMKETKIDGAVVVTTPQ 204          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A397CCB6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CCB6_9STRA)

HSP 1 Score: 201 bits (511), Expect = 6.270e-62
Identity = 92/117 (78.63%), Postives = 105/117 (89.74%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLDVDI GPSVPRMLGL G+EVHQS+ GWSPV+V D LGVMSIGFMLP  D+A+IWRGPKK+GLIKQFLTDV WG LDYL+IDTPPGTSDEH+S+V+YL+   +DGA+VVTTPQ
Sbjct:   78 QVGLLDVDITGPSVPRMLGLQGQEVHQSNEGWSPVYVDDNLGVMSIGFMLPNADDAIIWRGPKKSGLIKQFLTDVHWGDLDYLIIDTPPGTSDEHISIVQYLKDAQIDGAVVVTTPQ 194          
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Match: A0A2P4YPZ7_9STRA (Nucleotide-binding protein 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YPZ7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 6.330e-62
Identity = 89/117 (76.07%), Postives = 106/117 (90.60%), Query Frame = 0
Query:   11 QVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDGLGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPGTSDEHMSVVRYLEGCSVDGAIVVTTPQ 127
            QVGLLDVDI GPSVPRMLGL G+EVHQS++GWSPV+V D LGVMSIGFMLP  D+A+IWRGPKK+G+IKQFL DV WG+LDYL+IDTPPGTSDEH+S+V+Y++   +DGA+VVTTPQ
Sbjct:   90 QVGLLDVDITGPSVPRMLGLLGQEVHQSAAGWSPVYVDDNLGVMSIGFMLPDADDAIIWRGPKKSGIIKQFLVDVQWGELDYLIIDTPPGTSDEHISIVQYMKEADLDGAVVVTTPQ 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62329.13806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JII2_9PHAE4.880e-7795.73Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S2UWA7_9STRA2.600e-6885.47Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
W7TWQ3_9STRA9.250e-6676.98Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A6V1SZ98_HETAK1.270e-6582.91Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A835ZEQ2_9STRA1.430e-6582.05Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A7S0SUL6_9STRA3.870e-6579.49Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S3H9T7_9STRA7.980e-6376.92Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
T0RQD5_SAPDV1.220e-6278.63Cytosolic Fe-S cluster assembly factor NUBP1 homol... [more]
A0A397CCB6_9STRA6.270e-6278.63Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A2P4YPZ7_9STRA6.330e-6276.07Nucleotide-binding protein 1 (Fragment) n=1 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033756Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35PFAMPF10609ParAcoord: 10..127
e-value: 4.4E-50
score: 170.4
NoneNo IPR availableGENE3D3.40.50.300coord: 5..128
e-value: 9.0E-39
score: 135.3
IPR019591Mrp/NBP35 ATP-binding proteinPANTHERPTHR23264NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATEDcoord: 10..128
IPR000808Mrp, conserved sitePROSITEPS01215MRPcoord: 87..103
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62329contigH-elongata_contig62329:624..1544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62329.13806.1mRNA_H-elongata_contig62329.13806.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62329 624..1544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62329.13806.1 ID=prot_H-elongata_contig62329.13806.1|Name=mRNA_H-elongata_contig62329.13806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
MRCGARNCHGQVGLLDVDICGPSVPRMLGLTGREVHQSSSGWSPVWVTDG
LGVMSIGFMLPQQDNAVIWRGPKKNGLIKQFLTDVDWGQLDYLVIDTPPG
TSDEHMSVVRYLEGCSVDGAIVVTTPQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033756YlxH/NBP35
IPR019591Mrp/NBP35_ATP-bd
IPR000808Mrp_CS
IPR027417P-loop_NTPase