prot_H-elongata_contig62284.13798.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62284.13798.1
Unique Nameprot_H-elongata_contig62284.13798.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length227
Homology
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: D7G2R4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R4_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 1.950e-115
Identity = 161/225 (71.56%), Postives = 187/225 (83.11%), Query Frame = 0
Query:    2 IGCLVAYLPHLLRSSKYRQDSSLGCVMEERDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLCRKSNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEAGGGWFRQFPVLPIVPTVLLAVSALANLIGNYLGVMPLD 226
            IG LVA LPHLLRSSKYR+D  LGC++E  D+RRP++DMLVWTS VY LP+VYGL  HQYG+AGLQ+MTT+GS+LFHLTRETKFFNLDNVFATSLL  T W LYL V   G+WWYVV +GLGGP AI  IV CGMPGLVC+HP+G GLCR+SNP+YD FHMLWHL+SGL TL+++HFF   FP  EAGGGWF  FP +P+VPTV LA+SAL NL GN +GVMPL+
Sbjct:  154 IGSLVACLPHLLRSSKYRRDRGLGCLLETGDKRRPLTDMLVWTSFVYCLPSVYGLYAHQYGIAGLQLMTTIGSTLFHLTRETKFFNLDNVFATSLLSTTAWSLYLGVTH-GVWWYVVVIGLGGPFAIFCIVRCGMPGLVCRHPAGSGLCRRSNPEYDFFHMLWHLSSGLGTLITIHFFEVYFPAEEAGGGWFYFFPDVPVVPTVALALSALINLYGNRVGVMPLE 377          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A835Z7G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G3_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.680e-75
Identity = 122/226 (53.98%), Postives = 156/226 (69.03%), Query Frame = 0
Query:    2 IGCLVAYLPHLLRSSKYRQDSSLGCVMEERDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLCRK-SNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEAGGGWFRQFPVLPIVPTVLLAVSALANLIGNYLGVMPLD 226
            +GC ++  P+LLRSS+YR+D  L C +  RD RR + D LVWTSLVY +PA+YG+  HQYG+A LQ  TTVGS+LFH  RET++FNLDNV A +LL  T W L LA   A +W +   V  G PLA  F+V CGMPG+VC  PSG G  R+ SNP YD +HMLWHL SG  T+ S+HFF + +P ++AGGG F  FP +P+VP V L +SA  N+ GN+ G +PL 
Sbjct:  191 LGCALS--PYLLRSSRYRRDPRLRCRLGRRDVRRRLRDPLVWTSLVYAVPALYGVAAHQYGVAALQAATTVGSTLFHRARETRYFNLDNVGALALLFTTAWSLALAAR-ARVWAHAAVVLAGTPLAGYFMVACGMPGVVCACPSGDGTLRRASNPLYDHYHMLWHLVSGFGTIASIHFFASRYPHLDAGGGHFEHFPDVPVVPFVSLLLSAAVNVYGNWAGALPLS 413          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A7S2XVH3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVH3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 7.190e-58
Identity = 103/226 (45.58%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    1 MIGCLVAYLPHLLRSSKYRQDSSLGCVMEERDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAV-MDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLCRKSNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEAGGGWFRQFPVLPIVPTVLLAVSALANLIGNYLGVMPL 225
            +   L   +P+L ++S  R D S G  +  +++RR  +D LV+TSL YM   +Y   V QYG+A LQ+ T++GS+L+HLTRET FFN DN+ ATSLLL T +GLYL++ +D G   + +    G PL    +  CGMPG VC+   G+  C    P +   H  WH+AS   T++SV+FF  NFPD EAG GWF + P LPI PT+ + +S + N IGN  GVMPL
Sbjct:   88 LFSILFMGIPYLAKASPLRSDPSRGIKLSPKEKRRSFADPLVFTSLFYMFAGIYAFSVGQYGIALLQIYTSMGSTLYHLTRETMFFNCDNIGATSLLLLTAYGLYLSLGIDLG---WTILAAAGIPLGGAILHKCGMPGEVCK---GKRTCCSEYPSW---HSAWHVASSFGTVISVYFFEKNFPDHEAGAGWFAEMPFLPIAPTIAVVISVVQNFIGNKAGVMPL 304          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A7S1XWR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWR7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.520e-37
Identity = 87/227 (38.33%), Postives = 126/227 (55.51%), Query Frame = 0
Query:    5 LVAYLPHLLRSSKYRQD-SSLG---CVMEERDRRRPMSDMLVWTSLV-YMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLCRKSNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEAGGGWFRQFPVLPIVPTVLLAVSALANLIGNYLGVMPLD 226
            L+  LP+L R+S YR+D    G   C++   D  R + D+ VW+S V +  PA+Y  +  Q+ L  LQ+   + S L+HL+RET FFN+DNVF  SL       + LA  D G+ WYV+   L  P+A   +V C  PG+V +   G    R ++ +YD +H +WH ASG+VTL++ +F     P+ E G G    FP    V    + +S   NL+GN  GVMP+D
Sbjct:   32 LLPLLPYLGRASVYREDPGGRGQGFCLLRPEDCWRSVGDVQVWSSWVCFGGPALYSFLSAQWSLGALQLGAAITSGLYHLSRETLFFNVDNVFGLSLGCTVFVAVKLA-WDRGVMWYVIVNVLVLPVAGFLLVYCDFPGVVVR--QGEKARRLAHERYDFWHAVWHAASGVVTLLNTYFLVTYVPESECGAGMEPWFPYPSTVAFWSVLLSIGVNLVGNLAGVMPVD 255          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A7S3HNL6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL6_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.780e-26
Identity = 81/234 (34.62%), Postives = 122/234 (52.14%), Query Frame = 0
Query:    7 AYLPHLLRSSKYRQDSSLGCVMEERDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPG-----------LVCQHPSGRGLCRKSNPKYDLFHMLWHLASGLVTLVSV---HFFGANFPDMEAGGGWFRQFPVLPIVPTVLLAVSALANLIGNYLGVMPLD 226
            A+ P+L + SK+R+ S +G V       R  +D L+ TS  Y+L AV+     Q+ +A +  +T +GSSL+H  RE +FFNLDN+FATSLL   V+ L  +     I++ +  +GL  P A+  IV CGMP            +VC   +GR L       YD  H LWHLAS +   ++V   HF    +   +          ++  +P + L++S  AN+ GN  G+MPL+
Sbjct:   74 AFFPYLRKPSKHRR-SFVGSV------DRNWNDQLMTTSSSYLLSAVFAFSYGQFEIALICFITYIGSSLYHRHREMEFFNLDNIFATSLLFTCVYTLVSSYFTHEIYFIIGLMGL--PTAMFLIVYCGMPADIRFKDIPGLEVVCCVRTGREL-------YDTVHALWHLASSVGPCMAVWYFHFKANEYDKTDMSDLNKLDDQIISRLPYLALSLSIFANIAGNIDGIMPLE 291          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A7S3XR67_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR67_HETAK)

HSP 1 Score: 106 bits (265), Expect = 2.660e-24
Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    1 MIGCLVAYLPHLLRSSKYRQDSSLGCVMEERDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQ 142
            M   L+  LP+LL+ S  R+D S+G  + E D  RP+SD LV+TSL+Y LP +Y L  +   L  L + T+ GS++FHLTRET FFN DN+ A +L+L   +G YL++    IW      GL  P+    +  CGMPG + +
Sbjct:   96 MCAVLLYILPYLLKPSILRRDKSIGVNLTEEDLWRPISDPLVYTSLLYALPGLYALYYNMPFLGILHLYTSFGSTMFHLTRETMFFNWDNIGAMALMLIACFGFYLSLGTDMIWTAAAITGL--PIGAFLLAYCGMPGELAE 235          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A1V9YIV5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YIV5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.230e-9
Identity = 47/158 (29.75%), Postives = 74/158 (46.84%), Query Frame = 0
Query:   31 RDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLCRKSNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEA 188
            R   R  +D L+ T+LVY+L A+    V QY  A LQ+ +++ S+LFH +RETKF  LD + + +L +   + + L  ++  +   +    L G       + CGMPG                 +Y+++H  WH  SG  TL          PD +A
Sbjct:   17 RHNTRAWTDPLLLTNLVYVLAAIVSYCVGQYTCAILQLGSSIASTLFHRSRETKFLPLDALISGTLGIIAGY-VVLDAIENELHHVIGLKMLHGAGCAFTWIYCGMPG---------------GARYEIWHRRWHFVSGYTTLSCSLLMSVYHPDFDA 158          
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Match: A0A067CNL8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNL8_SAPPC)

HSP 1 Score: 61.2 bits (147), Expect = 4.170e-8
Identity = 45/158 (28.48%), Postives = 72/158 (45.57%), Query Frame = 0
Query:   31 RDRRRPMSDMLVWTSLVYMLPAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLATVWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLCRKSNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEA 188
            R   RP +D L+ T+LVY+  AV    V QY    LQ+ +++ S++FH +RETK+  LD + + +L +   + + L  ++  +   +    L G       + CGMPG                 +Y+ +H  WH  SG  TL          PD +A
Sbjct:   17 RHNTRPWTDPLLLTNLVYVAAAVVSYAVGQYTCGLLQLGSSIASTMFHRSRETKYLPLDAIISGTLGIIAAY-VVLDAIENELHHVLGLKLLHGAGCAFTWIYCGMPG---------------GARYETWHKRWHYVSGYTTLSCSLLMSVYHPDFDA 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62284.13798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G2R4_ECTSI1.950e-11571.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7G3_9STRA1.680e-7553.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVH3_9STRA7.190e-5845.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XWR7_9STRA2.520e-3738.33Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3HNL6_9STRA9.780e-2634.62Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3XR67_HETAK2.660e-2442.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YIV5_9STRA4.230e-929.75Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067CNL8_SAPPC4.170e-828.48Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..200
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..108
NoneNo IPR availableTMHMMTMhelixcoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 111..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62284contigH-elongata_contig62284:174..1623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62284.13798.1mRNA_H-elongata_contig62284.13798.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62284 2..2737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62284.13798.1 ID=prot_H-elongata_contig62284.13798.1|Name=mRNA_H-elongata_contig62284.13798.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp
MIGCLVAYLPHLLRSSKYRQDSSLGCVMEERDRRRPMSDMLVWTSLVYML
PAVYGLIVHQYGLAGLQMMTTVGSSLFHLTRETKFFNLDNVFATSLLLAT
VWGLYLAVMDAGIWWYVVTVGLGGPLAIIFIVLCGMPGLVCQHPSGRGLC
RKSNPKYDLFHMLWHLASGLVTLVSVHFFGANFPDMEAGGGWFRQFPVLP
IVPTVLLAVSALANLIGNYLGVMPLD*
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