mRNA_H-elongata_contig62261.13795.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A6H5KU09_9PHAE (Peroxin-7 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU09_9PHAE) HSP 1 Score: 137 bits (345), Expect = 3.690e-37 Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFS 238
G VKLWDL A + FP+A WREHTQ+VSGVDWNLVSKD F SASWDG+V+LW P A S+ TF DHG+HPVYGA+WSPFS
Sbjct: 93 GQVKLWDLGAVDGFPVADWREHTQEVSGVDWNLVSKDLFASASWDGSVKLWTPSAGVSSHTFRDHGRHPVYGAIWSPFS 171
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: D7FIF0_ECTSI (Peroxin-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF0_ECTSI) HSP 1 Score: 120 bits (300), Expect = 2.050e-30 Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYG 217
G VKLWDL A + FP+A WREHTQ+VSGVDWNLVSK F SASWDG+V+LW P A S+ TF DHG+HPVYG
Sbjct: 96 GVVKLWDLGAADGFPVADWREHTQEVSGVDWNLVSKGLFASASWDGSVKLWTPSAGVSSHTFRDHGRHPVYG 167
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A6G0WPL4_9STRA (Peroxin-7 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPL4_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.500e-24 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNARAAAVVVSRVH 331
G +KL+D+ ++AFP+ S+ EHT ++ GV+WNLV + +F SASWD T+++W P S +T H PVY AVWS + + S SGDG+ R+ D+NA A+V H
Sbjct: 86 GHLKLFDVTTQDAFPIQSYTEHTAEIGGVNWNLVERQTFCSASWDQTIKIWHPHRVQSLQTLHGH-TGPVYNAVWSTRDTNMIASCSGDGSVRLWDLNAPQQAIVRIPAH 194
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A7D8UIB9_9HELO (Peroxin-7 n=4 Tax=Lachnellula TaxID=47830 RepID=A0A7D8UIB9_9HELO) HSP 1 Score: 96.7 bits (239), Expect = 1.370e-21 Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNARAAA 310
G+VKL+DL + FP+ +W+EH ++V V WNLVSKD+F S+SWDGT+++W P S T H Y WSP S S L S S D R+ D+ A+A
Sbjct: 81 GSVKLFDLNVND-FPVKTWKEHNREVYAVHWNLVSKDTFASSSWDGTIKIWSPERDTSILTLPTHSC--TYSTAWSPHSPSILSSVSSDSHCRIFDLRTPASA 180
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A8H3EWP4_9LECA (Peroxin-7 n=4 Tax=Parmeliaceae TaxID=78060 RepID=A0A8H3EWP4_9LECA) HSP 1 Score: 96.3 bits (238), Expect = 1.970e-21 Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNARAAA 310
G+VKL+D+ +E FP+ SW+EH ++V V WNLVSKD+F S+SWDGT+R+W P P S T H Y A +SP S S L S S D R+ D+ A+A
Sbjct: 82 GSVKLFDIGIDE-FPIQSWKEHMREVFAVHWNLVSKDTFCSSSWDGTIRVWNPNRPTSLFTLPIHSC--TYSASFSPHSPSLLSSVSSDSQFRLFDLRTPASA 181
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A2B4RMY4_STYPI (Peroxin-7 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RMY4_STYPI) HSP 1 Score: 92.4 bits (228), Expect = 9.930e-21 Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSK-DSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNARAAAVVVSRVH 331
G++++WDL+ + P+ +EH+ +V GVDW+ + D F SASWD +++LW P S TF+DH QH VY AVWSP S SGD T R+ D++A A R H
Sbjct: 115 GSIQMWDLKNPKG-PIKVCKEHSAEVYGVDWSCNRQLDQFLSASWDHSIKLWDPNGAQSLATFADH-QHVVYSAVWSPHVPRTFASASGDNTLRIWDISAPPHAQQTIRAH 223
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A4P9YYE3_9FUNG (Peroxin-7 (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YYE3_9FUNG) HSP 1 Score: 92.8 bits (229), Expect = 1.060e-20 Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDV 292
G++KLWD+ E FP+ W EHT++V V+WNL+ KD+F SASWD T W P S TF H QH VY A+WSP A S GD RV DV
Sbjct: 84 GSIKLWDITLSE-FPIQHWTEHTKEVYSVNWNLIRKDTFLSASWDLT---WLPERRESLATFGAH-QHCVYEAIWSPHEADVFASACGDRIVRVWDV 175
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A2B4RKC5_STYPI (Peroxin-7 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RKC5_STYPI) HSP 1 Score: 95.5 bits (236), Expect = 1.210e-20 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSK-DSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNARAAAVVVSRVH 331
G++++WDL+ + P+ +EH+ +V GVDWN + D F SASWD +++LW P S TF+DH QH VY AVWSP + S SGD T R+ D++A A R H
Sbjct: 649 GSIQMWDLKNPKG-PIKVCKEHSAEVYGVDWNCNRQLDQFLSASWDHSIKLWDPNGAQSLATFADH-QHVVYSAVWSPHVSRTFASASGDNTLRIWDISAPPRAQQTIRAH 757
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: UPI001D04AAD4 (uncharacterized protein n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D04AAD4) HSP 1 Score: 94.0 bits (232), Expect = 1.310e-20 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSKDSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNARAAA 310
G++KL+D+ + FP+ SW+EH ++V V+WNLVSKDSF S+SWDGT+++W P P S T H Y A +SP + S L + S D R+ D+ A+A
Sbjct: 82 GSIKLFDIGVD-TFPVQSWQEHNREVFAVNWNLVSKDSFCSSSWDGTIKVWSPDRPTSLLTLPTHSC--TYSAAFSPHNPSLLSAVSSDSHLRLFDLRTPASA 181
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Match: A0A3M6TX64_POCDA (Peroxin-7 (Fragment) n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TX64_POCDA) HSP 1 Score: 92.4 bits (228), Expect = 1.670e-20 Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query: 2 GAVKLWDLEAEEAFPLASWREHTQDVSGVDWNLVSK-DSFGSASWDGTVRLWQPGAPASTRTFSDHGQHPVYGAVWSPFSASQLLSFSGDGTARVLDVNA 298
G++++WDL+ + P+ +EH+ +V GVDW+ + D F SASWD +++LW P S TF+DH QH VY AVWSP + S SGD T R+ D++A
Sbjct: 83 GSIQMWDLKNPKG-PIKVCKEHSAEVYGVDWSCNRQLDQFLSASWDHSIKLWDPNGAQSLATFADH-QHVVYSAVWSPHVSRTFASVSGDNTLRIWDISA 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62261.13795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62261.13795.1 >prot_H-elongata_contig62261.13795.1 ID=prot_H-elongata_contig62261.13795.1|Name=mRNA_H-elongata_contig62261.13795.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp WRGEALGFGGRGGVSLGKLEGTHARRLRRGLEPGLQGQFRVSFVGRHRAPback to top mRNA from alignment at H-elongata_contig62261:374..1700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62261.13795.1 ID=mRNA_H-elongata_contig62261.13795.1|Name=mRNA_H-elongata_contig62261.13795.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1327bp|location=Sequence derived from alignment at H-elongata_contig62261:374..1700- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62261:374..1700- >mRNA_H-elongata_contig62261.13795.1 ID=mRNA_H-elongata_contig62261.13795.1|Name=mRNA_H-elongata_contig62261.13795.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=666bp|location=Sequence derived from alignment at H-elongata_contig62261:374..1700- (Himanthalia elongata Himel1 dioecious)back to top |