mRNA_H-elongata_contig6220.13789.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6220.13789.1
Unique NamemRNA_H-elongata_contig6220.13789.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: D8LFK9_ECTSI (BCNT-C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK9_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.270e-71
Identity = 140/221 (63.35%), Postives = 159/221 (71.95%), Query Frame = 2
Query:  320 QQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVGRGSAKTAKGK-----KGNIKAAKKANKVLAGIFGKKTASSLVSKASKTKRRATRKEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
            ++  +T+G   S  +RSKID++WASMNA  + A     G      A+GK     K    A KKAN+VLAGIFGKK AS +VS A K KRR    E  AR K LAASR VE++EVKKYAGKDIVVKR VTAGSAE VAAA   KK GLDNVLA +DG KSISTVTKSS DWE YKA EG+ GD++Q  KDGK YLNKQDFLQRCDVRKFE EL ARQ+KR+A
Sbjct:   32 EEPEDTMGVATSDRQRSKIDDIWASMNASGAEATAPPAGGSGTGLAEGKGKKATKXXXXANKKANEVLAGIFGKKAASDIVSGAGKGKRRVGAAEGAARKKLLAASRKVEVTEVKKYAGKDIVVKRKVTAGSAEHVAAAGA-KKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGMEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 251          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S2PPL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPL4_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.600e-21
Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = 2
Query:  464 KKGNIKAAKKANKVLAGIFGKKTASSLVSKAS---KTKRRATRKEATARAKEL------AASRTVEISEVKKYAGKDIVVK--------RIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
            KKG I   KK  K+LA IFGK  A +++S AS   K K+R TR+   A + E          +   ++EVK++AG+D+ V+         + +   A   AA  Q K  GLD VL+ + G + ISTVTK+S DW+++K   G+  +LQ+  +D  +YL K++FLQR D+R+FE+E   R+ KR A
Sbjct:   15 KKGKISDKKK--KLLANIFGKNAAENMISSASSGLKKKKRKTRENVVAISDEKLNMLMNGVKQQKRVTEVKRFAGQDVRVEVAPTSVNGTVSSTEGATDTAAPVQHKTGGLDKVLSDLSGPQKISTVTKTSSDWDQFKDKHGLDDELQKKAQDKDAYLVKKEFLQRVDLRRFEHEKADREMKRAA 197          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S1TXE7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXE7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.370e-20
Identity = 86/249 (34.54%), Postives = 119/249 (47.79%), Query Frame = 2
Query:  311 GTSQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDV--------------------GRGSAKTAKGKKGNI------------KAAKKANKVLAGIFGKKTASSLVSKASKTKRRATRKEATARAKELAA-------SRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQK-KAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENE 937
            G +      LG G+  +++ K+D LW  MN  D   +R +                          +   GK                K  K+A KVL GIFGK  A+++V KA   +R+  RK AT    E A        S  V+I++  K+AG+   V + V A SAE  AA+A +K K GL++VL  + G K+IST+ K+S DW+ YK +  +   L    KDG  YL +QDFLQR D R FENE
Sbjct:    6 GAAATGDRGLGGGMGTYRKRKVDALWDEMNGQDDAYLRVETLXXXXXXXXXXXXXXXXXXXXXXXLEVVMGKAXXXXXXXXXXXXKLGKKKKRALKVLGGIFGKAGAAAIVGKADAGRRK--RKRATEDVSEAARAAVRNVKSEKVQITQSVKFAGEMTTVTKTVDAHSAEAKAASAPKKAKTGLESVLDEMKGPKTISTLEKTSVDWDGYKEEHKLNDSLADASKDG--YLTRQDFLQRVDARTFENE 250          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A4D9CWA7_9STRA (BCNT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.420e-20
Identity = 83/251 (33.07%), Postives = 118/251 (47.01%), Query Frame = 2
Query:  362 KRSKIDELWASMNADD----SFAIRRDVGRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSLVSKASKTKRRATRKEATARAKELAASRTVE--------ISEVKKYAGKDIVVKRIVTAGSAEQV---------------------------------------AAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKR 961
            ++ +++ +W  M  +D    +  +R   GRG+        G  K  ++A ++LAGIFG  TASS+V+KA    R              AA R +         ++E KK+AG+++ VKR+V    AE                                         A  ++ KKAGLD VL  + G + ISTV KSS+DWE +KA+ G+  +L Q  KDG  YL K+DFL+RCD R FE E  AR A R
Sbjct:   59 QQQRVEAMWEEMQREDRNGLAKVLRSTEGRGTGSGGTATNGEKKR-RRAQELLAGIFGNNTASSMVAKAGGGGRGEXXXXXXXXXXXTAARRALLKAHASKRIVTETKKFAGQEVQVKRVVVGEGAEGEGGREXXXXXXXXXXTLSKRQTALDPVVGPGPGMAEGKGGARGSEGKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 306          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A485K980_9STRA (Aste57867_1012 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K980_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.620e-19
Identity = 80/223 (35.87%), Postives = 110/223 (49.33%), Query Frame = 2
Query:  317 SQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVGRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSL------VSKASKTKRRATRKEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
            ++Q     GT  +   + K+D++W+ +NAD               TA  +K   K+ K  NK+L+G+ GKK    +      V   S T +RAT         EL       ++EV KYAG++  V +  TA            K + LD+ LA ++  K IST+ KSS DW+ +K  EGI+ +LQQ  KDG  YL KQDFL R DVRKFE E   R   R A
Sbjct:   45 ARQMQAKKGTLQAKAPKRKVDDMWSDLNAD---------------TAVSQKSTDKSQKLLNKLLSGVAGKKKKQMVHEFKIPVLGCSTTTKRAT---------ELKMPDET-VTEVLKYAGQEYSVTKKATA-----------PKASALDSALAALNQPKKISTIEKSSVDWDTFKDKEGISDELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 229          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A6G0WCK9_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCK9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.010e-17
Identity = 78/224 (34.82%), Postives = 110/224 (49.11%), Query Frame = 2
Query:  314 TSQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVGRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSL------VSKASKTKRRATRKEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
            T QQ  +         KR+ +D++W  +NAD + +               K+   K+ K  NK+L+G   KK    +      V   S +   ATRK A    K+       +++EV K+AG++  V + V++             ++GLD+ LA ++  K IST+ KSS DWE +K  EGIA +LQQ  KDG  YL KQDFL R DVRKFE E   R   R A
Sbjct:   42 TRQQQAKQTSASSQTKKRT-VDDMWGDLNADSAVS---------------KESTDKSKKLLNKLLSGGSSKKKKQKVHEFKIPVLGCSTS---ATRKTALKAEKD-------QVTEVLKFAGQEYSVTKKVSSS------------ESGLDSALAALNQPKKISTIEKSSMDWESFKDKEGIADELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 225          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S2S6Z9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Z9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.180e-16
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 2
Query:  629 VEISEVKKYAGKDIVVKR-IVTAG-SAEQVAAAAQQ-KKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
            V ++E  ++AG+ + V R +++AG SA+Q A+ A     + LD  L V+ G + ISTV KSS DW++YK + G   DL+Q  K G  YL++QDFL+RCDVR+FE E   RQ KR A
Sbjct:  170 VTVTEKVRFAGQTVEVSRQVLSAGDSADQDASKAPAGPNSSLDKALEVLSGPRKISTVAKSSADWDRYKEESGTQDDLEQAAKAG--YLSRQDFLERCDVRQFEKERDLRQDKRAA 283          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: I2CQ62_NANGC (Craniofacial development protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ62_NANGC)

HSP 1 Score: 85.1 bits (209), Expect = 1.440e-16
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  728 QKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKR 961
            +KKAGLD VL  + G + ISTV KSS+DWE +KA+ G+  +L Q  KDG  YL K+DFL+RCD R FE E  AR A R
Sbjct:   41 KKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 116          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A1V9YZ79_9STRA (BCNT-C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ79_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.290e-15
Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 2
Query:  638 SEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
            ++V KYAGK+  V            AA A +KK+GLD V+  +   K +ST+ KSS DW+ +K  EGIA +L+   KDG  YL KQDFL R D+RKFE E   R+  R A
Sbjct:  132 TQVMKYAGKEYTV------------AAKAPEKKSGLDAVVDALQQPKKVSTIEKSSLDWDSFKEKEGIADELEHHTKDG--YLEKQDFLHRVDLRKFEIEKAEREKVRRA 227          
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S4D8B7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B7_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 5.770e-15
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 2
Query:  629 VEISEVKKYAGKDIVVKRIVTAGSAEQVAAAA------QQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGAR 949
            V+++EV  +AG+   + ++V+A   E+           + +K+G+D VLA +     ISTVTKSS DWE +K +EG+  +L++  +DG  YL K+DFLQRCD R FE E G R
Sbjct:  160 VKVTEVVNFAGQSTQINKVVSAFDQEKSLGQENSTINKKNEKSGVDAVLANLQEPTKISTVTKSSADWENFKTEEGVGEELKKSTQDG--YLTKKDFLQRCDERSFEQEKGLR 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK9_ECTSI1.270e-7163.35BCNT-C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2PPL4_9STRA5.600e-2138.92Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1TXE7_9STRA4.370e-2034.54Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A4D9CWA7_9STRA5.420e-2033.07BCNT-C domain-containing protein n=1 Tax=Nannochlo... [more]
A0A485K980_9STRA5.620e-1935.87Aste57867_1012 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0WCK9_9STRA1.010e-1734.82BCNT-C domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A7S2S6Z9_9STRA1.180e-1646.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I2CQ62_NANGC1.440e-1656.41Craniofacial development protein 1 (Fragment) n=1 ... [more]
A0A1V9YZ79_9STRA1.290e-1545.45BCNT-C domain-containing protein n=1 Tax=Achlya hy... [more]
A0A7S4D8B7_HETAK5.770e-1541.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6220contigH-elongata_contig6220:2856..4890 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score237.3
Seed ortholog evalue7.2e-60
Seed eggNOG ortholog2880.D8LFK9
Preferred nameCFDP1
KEGG koko:K14537
KEGG Pathwayko03008,map03008
GOsGO:0000003,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000812,GO:0000819,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005604,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006323,GO:0006325,GO:0006338,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007155,GO:0008092,GO:0008150,GO:0008360,GO:0009987,GO:0010032,GO:0010941,GO:0016043,GO:0019222,GO:0019894,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0022610,GO:0030261,GO:0031012,GO:0031056,GO:0031060,GO:0031323,GO:0031399,GO:0031974,GO:0031981,GO:0032268,GO:0032991,GO:0033043,GO:0033044,GO:0034728,GO:0035065,GO:0042127,GO:0042981,GO:0043044,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051171,GO:0051246,GO:0051276,GO:0051321,GO:0051569,GO:0051570,GO:0060255,GO:0060548,GO:0062023,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070603,GO:0071103,GO:0071824,GO:0071840,GO:0080090,GO:0097346,GO:0098813,GO:0140014,GO:1901983,GO:1902275,GO:1902494,GO:1903046,GO:1903047,GO:1904949,GO:2000269,GO:2000270,GO:2000615,GO:2000756
EggNOG free text desc.chromosome organization
EggNOG OGsKOG4776@1,KOG4776@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBCNT-C domain
Ec32 orthologEc-04_001830.1
Exons4
Model size970
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6220.13789.1prot_H-elongata_contig6220.13789.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6220 3139..4890 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931003.4437292-UTR-H-elongata_contig6220:2855..31381622931003.4437292-UTR-H-elongata_contig6220:2855..3138Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6220 2856..3138 +
1691679658.3022408-UTR-H-elongata_contig6220:2855..31381691679658.3022408-UTR-H-elongata_contig6220:2855..3138Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6220 2856..3138 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931003.463917-CDS-H-elongata_contig6220:3138..33571622931003.463917-CDS-H-elongata_contig6220:3138..3357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 3139..3357 +
1691679658.311902-CDS-H-elongata_contig6220:3138..33571691679658.311902-CDS-H-elongata_contig6220:3138..3357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 3139..3357 +
1622931003.4774897-CDS-H-elongata_contig6220:3600..37701622931003.4774897-CDS-H-elongata_contig6220:3600..3770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 3601..3770 +
1691679658.3196845-CDS-H-elongata_contig6220:3600..37701691679658.3196845-CDS-H-elongata_contig6220:3600..3770Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 3601..3770 +
1622931003.4907236-CDS-H-elongata_contig6220:4326..44441622931003.4907236-CDS-H-elongata_contig6220:4326..4444Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 4327..4444 +
1691679658.3273234-CDS-H-elongata_contig6220:4326..44441691679658.3273234-CDS-H-elongata_contig6220:4326..4444Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 4327..4444 +
1622931003.5114849-CDS-H-elongata_contig6220:4710..48901622931003.5114849-CDS-H-elongata_contig6220:4710..4890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 4711..4890 +
1691679658.3376691-CDS-H-elongata_contig6220:4710..48901691679658.3376691-CDS-H-elongata_contig6220:4710..4890Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6220 4711..4890 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6220.13789.1

>prot_H-elongata_contig6220.13789.1 ID=prot_H-elongata_contig6220.13789.1|Name=mRNA_H-elongata_contig6220.13789.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
MVMGFMLLHGTSQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDV
GRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSLVSKASKTKRRATR
KEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQK
KAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSY
LNKQDFLQRCDVRKFENELGARQAKRNA*
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mRNA from alignment at H-elongata_contig6220:2856..4890+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6220.13789.1 ID=mRNA_H-elongata_contig6220.13789.1|Name=mRNA_H-elongata_contig6220.13789.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2035bp|location=Sequence derived from alignment at H-elongata_contig6220:2856..4890+ (Himanthalia elongata Himel1 dioecious)
GTGCCTTTTCCCACACGCGCCAATGTTTCACAGATGAGAAGGTCGAAGAC GACGACGAGGAAAACGAAGACCACGAGGAGGTGAGAGACTCTAGATCAGC GGCGCACGCTGATGTGCGATCAGCTCTAAGCACGATCTCGGGAGGTCTTC AACTCATATAAGCCTTAACTCAAATGAGCCACTGATGGGAATTTTACGCC ACGGCTCTCCCCATCTCGAGCATTCCTAGAGCTACCGTCTAGCTTCAACA TATTTTGACACTCTCGCAAACATCAAGCTTGAGATGGTAATGGGATTTAT GCTACTGCACGGCACCTCCCAGCAGTCCACGGAGACCCTAGGGACGGGTA TAAGCGCGCACAAAAGGTCGAAGATCGACGAGCTGTGGGCAAGCATGAAC GCGGATGACAGCTTTGCGATTCGTAGAGATGTCGGCAGAGGTTCAGCGAA GACGGCGAAGGGAAAAAAGGGAAATATAAAGGCTGCGAAGAAGGCTAACA AGGTACACCAACGCCGCGAAGAGATCAGGGGGTGAAGGCGGTTCCGTGCA TGCATGCATGTCTCACCCGTCTAGGTCGGGTTTTGAAGGAACGAGGAGGC GTTTATCTGGATGTGGTTTGGGCTGTCGCGAGTTCACGAAGGCGGTGCGC TCTCCATGCAGCTCTAAAACACAAGAAGGCTACTATTATTTAGTACGCCG TATTTGGGATAAATGTGCGGCGCCTTCCCTTGGGCGGCCACACAGGTGTT GGCCGGAATTTTTGGCAAGAAGACGGCGTCAAGCTTGGTTTCCAAGGCGA GCAAGACCAAGCGACGGGCGACAAGAAAAGAGGCAACGGCACGCGCGAAG GAGCTGGCCGCCAGTCGAACGGTGGAGATCTCCGAGGTCAAGAAATACGC CGGGAAGGACATTGTGTAAGTGGATGAGCGTATCGGAGACGGTGTGAAAT GCGTGAGTGGTTACGAGTTTTGGGTTAGTCTGTCGGGGGCGTAGTTGAAA ACGATGGTGGCGACTTGCGTGTACGTGTGTGTACCGTAGCCAACGTGCTT GGTGTCATAGCATGATATCGATAGTTTGCAGCGCGCTGCGCTGTTTAGAG GTGCGGGTCGCGGCCGGATTGCGCACGACGCGTTTGCCGGAAGGTGTGAC GTGCTGTTGAGTCAAGTTGCCTCGTCGCTTCCACGACAAGGTAGGTACCG CGCGACTTACACCCAACTCCGTCGACGCATGTACACACTGGGGGGGGGGT ATCCTCGACGGATAAGAAATAGGAATCCTTGTAGGTTTAAAACATGTGTT TTGTGGCTCACCAGCAGCGTGGAGTGCGAATTGCACCGGAAGAATTACAG TGAGAACCTTCAAGAACTAGTTTCACCCGTCCTAAGACTAACTGGAATAT CAACATGCTACTAACAAGTGCCGCGTCCTTCCTGCTCACCGATGATGCCC AAACGTTATCTACCGTGGTAGCGTGAAGCGGATCGTGACGGCTGGATCTG CCGAGCAGGTCGCCGCTGCTGCTCAGCAGAAGAAGGCTGGTCTCGATAAC GTTTTGGCGGTGATCGATGGTACCAAATCAATCTCGACGGTGAGAGGCTT GGTCCCACGCGAACCCTGACGACCACTGTTGGCATCACTTCACCGCCTTG AAAATCGAAAGCTTTCGTTTGATGCAAGCATTCGTCTAGGCATACTCGAT GGATCGATCGCGAATACTCGGGGGGGGGAAAAAGAAGCAGGAAGGAAAAA TAGCGCACCTGCTTGAAACTCCCGCCCCTTCCCCCCACCTCCTGCCTCCA TCCATCTATGAAAACCCCCATCGCATTGAACTGAAATCGTCCTGTGAAAA AAAAGGTGACGAAATCGTCCTTTGATTGGGAAAAGTATAAGGCCGACGAG GGCATCGCGGGGGATTTGCAGCAGGTCGTCAAGGACGGCAAGAGCTACCT CAATAAGCAGGACTTCCTGCAGCGGTGCGACGTCCGAAAGTTCGAAAACG AGCTGGGGGCTCGACAGGCGAAGCGCAACGCCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig6220:2856..4890+

>mRNA_H-elongata_contig6220.13789.1 ID=mRNA_H-elongata_contig6220.13789.1|Name=mRNA_H-elongata_contig6220.13789.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig6220:2856..4890+ (Himanthalia elongata Himel1 dioecious)
ATGGTAATGGGATTTATGCTACTGCACGGCACCTCCCAGCAGTCCACGGA
GACCCTAGGGACGGGTATAAGCGCGCACAAAAGGTCGAAGATCGACGAGC
TGTGGGCAAGCATGAACGCGGATGACAGCTTTGCGATTCGTAGAGATGTC
GGCAGAGGTTCAGCGAAGACGGCGAAGGGAAAAAAGGGAAATATAAAGGC
TGCGAAGAAGGCTAACAAGATGGTAATGGGATTTATGCTACTGCACGGCA
CCTCCCAGCAGTCCACGGAGACCCTAGGGACGGGTATAAGCGCGCACAAA
AGGTCGAAGATCGACGAGCTGTGGGCAAGCATGAACGCGGATGACAGCTT
TGCGATTCGTAGAGATGTCGGCAGAGGTTCAGCGAAGACGGCGAAGGGAA
AAAAGGGAAATATAAAGGCTGCGAAGAAGGCTAACAAGGTGTTGGCCGGA
ATTTTTGGCAAGAAGACGGCGTCAAGCTTGGTTTCCAAGGCGAGCAAGAC
CAAGCGACGGGCGACAAGAAAAGAGGCAACGGCACGCGCGAAGGAGCTGG
CCGCCAGTCGAACGGTGGAGATCTCCGAGGTCAAGAAATACGCCGGGAAG
GACATTGTGTGTTGGCCGGAATTTTTGGCAAGAAGACGGCGTCAAGCTTG
GTTTCCAAGGCGAGCAAGACCAAGCGACGGGCGACAAGAAAAGAGGCAAC
GGCACGCGCGAAGGAGCTGGCCGCCAGTCGAACGGTGGAGATCTCCGAGG
TCAAGAAATACGCCGGGAAGGACATTGTCGTGAAGCGGATCGTGACGGCT
GGATCTGCCGAGCAGGTCGCCGCTGCTGCTCAGCAGAAGAAGGCTGGTCT
CGATAACGTTTTGGCGGTGATCGATGGTACCAAATCAATCTCGACGCGTG
AAGCGGATCGTGACGGCTGGATCTGCCGAGCAGGTCGCCGCTGCTGCTCA
GCAGAAGAAGGCTGGTCTCGATAACGTTTTGGCGGTGATCGATGGTACCA
AATCAATCTCGACGGTGACGAAATCGTCCTTTGATTGGGAAAAGTATAAG
GCCGACGAGGGCATCGCGGGGGATTTGCAGCAGGTCGTCAAGGACGGCAA
GAGCTACCTCAATAAGCAGGACTTCCTGCAGCGGTGCGACGTCCGAAAGT
TCGAAAACGAGCTGGGGGCTCGACAGGCGAAGCGCAACGCCTGAGTGACG
AAATCGTCCTTTGATTGGGAAAAGTATAAGGCCGACGAGGGCATCGCGGG
GGATTTGCAGCAGGTCGTCAAGGACGGCAAGAGCTACCTCAATAAGCAGG
ACTTCCTGCAGCGGTGCGACGTCCGAAAGTTCGAAAACGAGCTGGGGGCT
CGACAGGCGAAGCGCAACGCCTGA
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