mRNA_H-elongata_contig6220.13789.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: D8LFK9_ECTSI (BCNT-C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK9_ECTSI) HSP 1 Score: 231 bits (589), Expect = 1.270e-71 Identity = 140/221 (63.35%), Postives = 159/221 (71.95%), Query Frame = 2
Query: 320 QQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVGRGSAKTAKGK-----KGNIKAAKKANKVLAGIFGKKTASSLVSKASKTKRRATRKEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
++ +T+G S +RSKID++WASMNA + A G A+GK K A KKAN+VLAGIFGKK AS +VS A K KRR E AR K LAASR VE++EVKKYAGKDIVVKR VTAGSAE VAAA KK GLDNVLA +DG KSISTVTKSS DWE YKA EG+ GD++Q KDGK YLNKQDFLQRCDVRKFE EL ARQ+KR+A
Sbjct: 32 EEPEDTMGVATSDRQRSKIDDIWASMNASGAEATAPPAGGSGTGLAEGKGKKATKXXXXANKKANEVLAGIFGKKAASDIVSGAGKGKRRVGAAEGAARKKLLAASRKVEVTEVKKYAGKDIVVKRKVTAGSAEHVAAAGA-KKGGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGMEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 251
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S2PPL4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPL4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.600e-21 Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = 2
Query: 464 KKGNIKAAKKANKVLAGIFGKKTASSLVSKAS---KTKRRATRKEATARAKEL------AASRTVEISEVKKYAGKDIVVK--------RIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
KKG I KK K+LA IFGK A +++S AS K K+R TR+ A + E + ++EVK++AG+D+ V+ + + A AA Q K GLD VL+ + G + ISTVTK+S DW+++K G+ +LQ+ +D +YL K++FLQR D+R+FE+E R+ KR A
Sbjct: 15 KKGKISDKKK--KLLANIFGKNAAENMISSASSGLKKKKRKTRENVVAISDEKLNMLMNGVKQQKRVTEVKRFAGQDVRVEVAPTSVNGTVSSTEGATDTAAPVQHKTGGLDKVLSDLSGPQKISTVTKTSSDWDQFKDKHGLDDELQKKAQDKDAYLVKKEFLQRVDLRRFEHEKADREMKRAA 197
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S1TXE7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXE7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.370e-20 Identity = 86/249 (34.54%), Postives = 119/249 (47.79%), Query Frame = 2
Query: 311 GTSQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDV--------------------GRGSAKTAKGKKGNI------------KAAKKANKVLAGIFGKKTASSLVSKASKTKRRATRKEATARAKELAA-------SRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQK-KAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENE 937
G + LG G+ +++ K+D LW MN D +R + + GK K K+A KVL GIFGK A+++V KA +R+ RK AT E A S V+I++ K+AG+ V + V A SAE AA+A +K K GL++VL + G K+IST+ K+S DW+ YK + + L KDG YL +QDFLQR D R FENE
Sbjct: 6 GAAATGDRGLGGGMGTYRKRKVDALWDEMNGQDDAYLRVETLXXXXXXXXXXXXXXXXXXXXXXXLEVVMGKAXXXXXXXXXXXXKLGKKKKRALKVLGGIFGKAGAAAIVGKADAGRRK--RKRATEDVSEAARAAVRNVKSEKVQITQSVKFAGEMTTVTKTVDAHSAEAKAASAPKKAKTGLESVLDEMKGPKTISTLEKTSVDWDGYKEEHKLNDSLADASKDG--YLTRQDFLQRVDARTFENE 250
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A4D9CWA7_9STRA (BCNT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.420e-20 Identity = 83/251 (33.07%), Postives = 118/251 (47.01%), Query Frame = 2
Query: 362 KRSKIDELWASMNADD----SFAIRRDVGRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSLVSKASKTKRRATRKEATARAKELAASRTVE--------ISEVKKYAGKDIVVKRIVTAGSAEQV---------------------------------------AAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKR 961
++ +++ +W M +D + +R GRG+ G K ++A ++LAGIFG TASS+V+KA R AA R + ++E KK+AG+++ VKR+V AE A ++ KKAGLD VL + G + ISTV KSS+DWE +KA+ G+ +L Q KDG YL K+DFL+RCD R FE E AR A R
Sbjct: 59 QQQRVEAMWEEMQREDRNGLAKVLRSTEGRGTGSGGTATNGEKKR-RRAQELLAGIFGNNTASSMVAKAGGGGRGEXXXXXXXXXXXTAARRALLKAHASKRIVTETKKFAGQEVQVKRVVVGEGAEGEGGREXXXXXXXXXXTLSKRQTALDPVVGPGPGMAEGKGGARGSEGKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 306
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A485K980_9STRA (Aste57867_1012 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K980_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.620e-19 Identity = 80/223 (35.87%), Postives = 110/223 (49.33%), Query Frame = 2
Query: 317 SQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVGRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSL------VSKASKTKRRATRKEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
++Q GT + + K+D++W+ +NAD TA +K K+ K NK+L+G+ GKK + V S T +RAT EL ++EV KYAG++ V + TA K + LD+ LA ++ K IST+ KSS DW+ +K EGI+ +LQQ KDG YL KQDFL R DVRKFE E R R A
Sbjct: 45 ARQMQAKKGTLQAKAPKRKVDDMWSDLNAD---------------TAVSQKSTDKSQKLLNKLLSGVAGKKKKQMVHEFKIPVLGCSTTTKRAT---------ELKMPDET-VTEVLKYAGQEYSVTKKATA-----------PKASALDSALAALNQPKKISTIEKSSVDWDTFKDKEGISDELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 229
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A6G0WCK9_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCK9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.010e-17 Identity = 78/224 (34.82%), Postives = 110/224 (49.11%), Query Frame = 2
Query: 314 TSQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVGRGSAKTAKGKKGNIKAAKKANKVLAGIFGKKTASSL------VSKASKTKRRATRKEATARAKELAASRTVEISEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
T QQ + KR+ +D++W +NAD + + K+ K+ K NK+L+G KK + V S + ATRK A K+ +++EV K+AG++ V + V++ ++GLD+ LA ++ K IST+ KSS DWE +K EGIA +LQQ KDG YL KQDFL R DVRKFE E R R A
Sbjct: 42 TRQQQAKQTSASSQTKKRT-VDDMWGDLNADSAVS---------------KESTDKSKKLLNKLLSGGSSKKKKQKVHEFKIPVLGCSTS---ATRKTALKAEKD-------QVTEVLKFAGQEYSVTKKVSSS------------ESGLDSALAALNQPKKISTIEKSSMDWESFKDKEGIADELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 225
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S2S6Z9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Z9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.180e-16 Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 2
Query: 629 VEISEVKKYAGKDIVVKR-IVTAG-SAEQVAAAAQQ-KKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
V ++E ++AG+ + V R +++AG SA+Q A+ A + LD L V+ G + ISTV KSS DW++YK + G DL+Q K G YL++QDFL+RCDVR+FE E RQ KR A
Sbjct: 170 VTVTEKVRFAGQTVEVSRQVLSAGDSADQDASKAPAGPNSSLDKALEVLSGPRKISTVAKSSADWDRYKEESGTQDDLEQAAKAG--YLSRQDFLERCDVRQFEKERDLRQDKRAA 283
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: I2CQ62_NANGC (Craniofacial development protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ62_NANGC) HSP 1 Score: 85.1 bits (209), Expect = 1.440e-16 Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 2
Query: 728 QKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKR 961
+KKAGLD VL + G + ISTV KSS+DWE +KA+ G+ +L Q KDG YL K+DFL+RCD R FE E AR A R
Sbjct: 41 KKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 116
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A1V9YZ79_9STRA (BCNT-C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ79_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.290e-15 Identity = 50/110 (45.45%), Postives = 65/110 (59.09%), Query Frame = 2
Query: 638 SEVKKYAGKDIVVKRIVTAGSAEQVAAAAQQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGARQAKRNA 967
++V KYAGK+ V AA A +KK+GLD V+ + K +ST+ KSS DW+ +K EGIA +L+ KDG YL KQDFL R D+RKFE E R+ R A
Sbjct: 132 TQVMKYAGKEYTV------------AAKAPEKKSGLDAVVDALQQPKKVSTIEKSSLDWDSFKEKEGIADELEHHTKDG--YLEKQDFLHRVDLRKFEIEKAEREKVRRA 227
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Match: A0A7S4D8B7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B7_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 5.770e-15 Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 2
Query: 629 VEISEVKKYAGKDIVVKRIVTAGSAEQVAAAA------QQKKAGLDNVLAVIDGTKSISTVTKSSFDWEKYKADEGIAGDLQQVVKDGKSYLNKQDFLQRCDVRKFENELGAR 949
V+++EV +AG+ + ++V+A E+ + +K+G+D VLA + ISTVTKSS DWE +K +EG+ +L++ +DG YL K+DFLQRCD R FE E G R
Sbjct: 160 VKVTEVVNFAGQSTQINKVVSAFDQEKSLGQENSTINKKNEKSGVDAVLANLQEPTKISTVTKSSADWENFKTEEGVGEELKKSTQDG--YLTKKDFLQRCDERSFEQEKGLR 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6220.13789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6220.13789.1 >prot_H-elongata_contig6220.13789.1 ID=prot_H-elongata_contig6220.13789.1|Name=mRNA_H-elongata_contig6220.13789.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp MVMGFMLLHGTSQQSTETLGTGISAHKRSKIDELWASMNADDSFAIRRDVback to top mRNA from alignment at H-elongata_contig6220:2856..4890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6220.13789.1 ID=mRNA_H-elongata_contig6220.13789.1|Name=mRNA_H-elongata_contig6220.13789.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2035bp|location=Sequence derived from alignment at H-elongata_contig6220:2856..4890+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6220:2856..4890+ >mRNA_H-elongata_contig6220.13789.1 ID=mRNA_H-elongata_contig6220.13789.1|Name=mRNA_H-elongata_contig6220.13789.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig6220:2856..4890+ (Himanthalia elongata Himel1 dioecious)back to top |