mRNA_H-elongata_contig62184.13788.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA) HSP 1 Score: 296 bits (757), Expect = 3.210e-94 Identity = 152/234 (64.96%), Postives = 184/234 (78.63%), Query Frame = 1
Query: 1 QIEIQHIVQASKAQRTI-HNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQHAANEP 699
Q E+ HIVQAS+ QR +SAH GAV DL TD R RLLVISF +LH AQQL+GINA+FYYS SFF GI+ +PL+GT G +NVLATY ALKLMD GRV L+LWS+GGM S + +T +LLG PN VA++GVM+FV+FFEIGLGPIPWLIVAEMFDAKYVATAMS+A QVNWA NFVVG+G+P++ A+GP+ F+ F ++L A FLF+LL LPETAGR+ E+Q N P
Sbjct: 319 QKEVDHIVQASRVQRLEGQSSAHGSGAVWDLITDPRVRLLVISFTVLHMAQQLSGINAVFYYSTSFFDGIVADPLVGTAAAGTVNVLATYAALKLMDRCGRVTLLLWSSGGMFLSCIAITASLLGIAPNYVALLGVMAFVSFFEIGLGPIPWLIVAEMFDAKYVATAMSIASQVNWAFNFVVGLGFPMLSRALGPWVFVPFAAVLAAVFLFSLLMLPETAGRTHQEIQRIINAP 552
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S2S0R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0R8_9STRA) HSP 1 Score: 266 bits (679), Expect = 6.720e-85 Identity = 131/231 (56.71%), Postives = 172/231 (74.46%), Query Frame = 1
Query: 7 EIQHIVQASKAQRTIHNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQHAANEP 699
EIQ++ A + RT H SAHS GA+MDLF D R RLL+I V++H +QQL GINA+FYYS SFF G+IDNPL+GT +V A+NV AT++A LMD R L+LWS GGM+ S V++T L+ +PN +A++ V+S+V FFEIGLGPIPWLIVAEMFDAKYVATA S+ CQ+NW NF++G+ +P + A+G ++F+ F +L+ F+FT LYLPET RSV E+Q N P
Sbjct: 106 EIQNLQDAHEMTRTRHKSAHSGGAIMDLFYDDRVRLLLICCVVMHISQQLCGINAVFYYSTSFFNGVIDNPLLGTVIVAAVNVAATWLAQILMDRCFRRTLLLWSAGGMILSLVILTAALMQVVPNYMALVSVISYVAFFEIGLGPIPWLIVAEMFDAKYVATAQSLVCQINWVCNFIIGVAFPSLNAALGVWTFVPFAIVLVFAFIFTALYLPETLNRSVDEIQQLINGP 336
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.560e-82 Identity = 134/161 (83.23%), Postives = 150/161 (93.17%), Query Frame = 1
Query: 1 QIEIQHIVQASKAQRTIHNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAK 483
QIEI HI++AS AQRT H SAHS+GAV+DLF D RQRLLV+SF+ILHAAQQLTGINA+FYYSNSFFVGIIDNPLIGTTLVG +NV+ATYVAL+LMD TGRVPLM+WS GGMLASTVVVTL+LLG LPN++AV GVM+FVTFFE+GLGPIPWLIVAEMFDAK
Sbjct: 312 QIEIDHILEASSAQRTSHTSAHSRGAVLDLFMDKRQRLLVVSFLILHAAQQLTGINAVFYYSNSFFVGIIDNPLIGTTLVGVVNVVATYVALQLMDKTGRVPLMMWSAGGMLASTVVVTLSLLGMLPNVIAVFGVMAFVTFFEMGLGPIPWLIVAEMFDAK 472
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: I2CP18_NANGC (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP18_NANGC) HSP 1 Score: 266 bits (681), Expect = 1.720e-82 Identity = 135/230 (58.70%), Postives = 175/230 (76.09%), Query Frame = 1
Query: 1 QIEIQHIVQASKAQRTIHNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQHAA 690
++E++H++ AS+ +T HNSAHS A+ DLF D RLL+IS ++L +QQL GINA+FYYS FF G+I +PL GT LV ++NV+ATYVALKLMDT GR L+LWS GML S V+VT+ L +P++VA++GVM FV FFEIGLGPIPWLIVAEMFD KYVAT+MS++CQVNWA NF++GIG+P + +G SF+ FG +L T +T YLPET GR+V E+Q A
Sbjct: 319 EMEVEHMMMASRRAKTPHNSAHSASALYDLFRDPSVRLLLISCLVLQISQQLCGINAVFYYSTMFFQGLIADPLEGTILVASVNVIATYVALKLMDTCGRRTLVLWSASGMLFSCVMVTMALYHVVPDVVALLGVMLFVFFFEIGLGPIPWLIVAEMFDQKYVATSMSLSCQVNWACNFIIGIGFPFINAWLGKASFVPFGIVLALTLSYTYFYLPETLGRTVQEIQQLA 548
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S2UII2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII2_9STRA) HSP 1 Score: 253 bits (646), Expect = 1.480e-78 Identity = 128/232 (55.17%), Postives = 172/232 (74.14%), Query Frame = 1
Query: 7 EIQHIVQASKAQRT--IHNSAH-----SKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQ 681
E+ H + ASK Q+ + +++ SKG M+LFTD + R+LV+S ++L AQQL GINA+FYYS FF G+I NPL+GTT+VGA+NV+ATYVAL LMD+ GR L+LWS+GGM +++ L+LLG+ + VA++ V +V+FFEIGLGPIPWLIVAEMFDAKYV AMS CQ+NWA NF+VG+ +P M +GPYSF+ F +LL TF+F L++LPET G + E+Q
Sbjct: 172 EVGHFISASKVQQMDPVSETSNPREQASKGPFMELFTDKKVRMLVVSSLVLQMAQQLCGINAVFYYSTMFFEGVISNPLVGTTVVGAVNVVATYVALMLMDSCGRRTLILWSSGGMFICCIMIVLSLLGFFNHFVALLAVNLYVSFFEIGLGPIPWLIVAEMFDAKYVTIAMSACCQLNWACNFIVGLVFPYMNKYLGPYSFVPFAVVLLGTFIFALIWLPETQGTTPAELQ 403
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S3XY67_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY67_HETAK) HSP 1 Score: 244 bits (622), Expect = 2.970e-77 Identity = 132/228 (57.89%), Postives = 160/228 (70.18%), Query Frame = 1
Query: 7 EIQHIVQASKAQRTIHNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQHAA 690
E+ H+ A T H SAHS AV DL D R R LV+S +++HA QQL GINA+FYYSN FF G+I++PL+GT L GAINV +VAL+LMD GR L++ S GMLA +TL L+G +PNIVA+ VMS+VTFFEIG GPIPWLIVAEMFDAKYVATA SVA QVNW NFVVG+ +P + A+GPYSF F ++ LA F LPETAG++ EV A
Sbjct: 11 EVGHMQSAMAVHATRHASAHSGSAVGDLLADPRLRPLVVSMIVVHAGQQLCGINAVFYYSNMFFDGVIEDPLVGTCLAGAINVFGVWVALRLMDRMGRKRLLVISGAGMLAGCACLTLALMGAVPNIVALFAVMSYVTFFEIGFGPIPWLIVAEMFDAKYVATAQSVAVQVNWFFNFVVGLTFPSISEALGPYSFGPFAALTLAAAAFCHWRLPETAGKAPDEVAREA 238
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S2LQX5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQX5_9STRA) HSP 1 Score: 238 bits (607), Expect = 6.040e-75 Identity = 122/230 (53.04%), Postives = 169/230 (73.48%), Query Frame = 1
Query: 7 EIQHIVQASKAQRTIHNSAHSKGA-----VMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQ 681
E++H + ASK+Q ++ +S G+ ++++F D + RLLVIS +++ A Q +GINA+FYYS FF G+I+NPL+GTTL+GAINVLATYVAL LMD GR L++WS+ GM S +V+ ++L GY ++VA+ V S+V FFEIGLGPIPWLIVAEMF+ KYVA AMS++CQ+NWA NF VG+ +P + ++G YSF F +LL TF+F +YLPET G + E+Q
Sbjct: 23 EVEHYLGASKSQSCNDSNDNSGGSSAKNPMLEMFQDKKVRLLVISTLVMQVASQFSGINAVFYYSGLFFDGVIENPLVGTTLMGAINVLATYVALLLMDKCGRRTLIMWSSAGMFVSCIVIVVSLNGYFSDMVALGAVASYVCFFEIGLGPIPWLIVAEMFEGKYVAPAMSISCQLNWACNFFVGLFFPYINKSLGAYSFGPFAIVLLLTFMFAWIYLPETQGTTPAELQ 252
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S1BUZ7_9STRA (Hypothetical protein n=5 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUZ7_9STRA) HSP 1 Score: 243 bits (621), Expect = 8.460e-74 Identity = 127/210 (60.48%), Postives = 159/210 (75.71%), Query Frame = 1
Query: 55 NSAHSKG-AVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQ 681
N A + G AV+ +F D R R L ++ V+L AQQL GINA+FYYS +FF GIIDNPL+GTT + A+NV+ATYVAL LMD+ GR L+LWS+GGML S +V+ L LLGY+PN+VA+I V +V+FFEIGLGPIPWLIVAEMFDAKYVATAMS++ QVNW NF+VG+ +P + + YSF FG +LL TFLF LPET G + E+Q
Sbjct: 320 NEAENNGSAVVQMFQDLRVRHLAVAAVLLQMAQQLCGINAVFYYSTAFFEGIIDNPLVGTTTICAVNVVATYVALLLMDSCGRRVLILWSSGGMLISVIVIVLALLGYMPNVVALIAVNVYVSFFEIGLGPIPWLIVAEMFDAKYVATAMSLSSQVNWTCNFIVGLVFPYLDEYLHAYSFAPFGIVLLMTFLFAAFKLPETQGTTPQELQ 529
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S1XZ20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZ20_9STRA) HSP 1 Score: 239 bits (610), Expect = 1.200e-72 Identity = 120/224 (53.57%), Postives = 161/224 (71.88%), Query Frame = 1
Query: 7 EIQHIVQASKAQRTIHNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEV 678
E+ HI++AS+ T H SAHS GA+ DL TD R+LV+S V LH +QQL GINA+FYYSN FF GII+NPL+ TTL +NVLATYVAL+LMD GR L+LWS GML T+++TL L G +P VA++GV+++V+FFEIGLGP+ WL AE+FDAKYVATAMS+ Q+NW NFV+G+ +P + + ++F+ F +L F F Y+PE G++ E+
Sbjct: 246 EVDHILEASRTALTRHTSAHSGGAMWDLLTDRDVRVLVLSAVFLHVSQQLCGINAVFYYSNMFFDGIIENPLVATTLTAFVNVLATYVALRLMDICGRRTLILWSCMGMLIGTMLITLALHGLVPKYVALLGVLAYVSFFEIGLGPVAWLFPAEVFDAKYVATAMSIGSQLNWFFNFVIGVCFPFLNSYLQAWTFVPFAVVLFLAFTFFSTYMPEPLGKTPNEI 469
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Match: A0A7S4J4S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4S9_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.640e-72 Identity = 123/229 (53.71%), Postives = 166/229 (72.49%), Query Frame = 1
Query: 7 EIQHIVQASKAQRTIHNSAH--SKGAVMDLFTDSRQRLLVISFVILHAAQQLTGINAIFYYSNSFFVGIIDNPLIGTTLVGAINVLATYVALKLMDTTGRVPLMLWSTGGMLASTVVVTLTLLGYLPNIVAVIGVMSFVTFFEIGLGPIPWLIVAEMFDAKYVATAMSVACQVNWASNFVVGIGWPIMQGAMGPYSFLTFGSILLATFLFTLLYLPETAGRSVGEVQHA 687
E H V A+ Q+ S S+ AV ++F D + RLLV+S ++L +QQL GINA+FYYSN FF G+IDNPL+GTT+VGA+NV ATYVAL LMD+ GR L++WS+G M S +++ L+LL Y ++VA++ V +V FFEIG+GPIPWLIVAEMFDAKYVATAMSV+ QVNW NF++G+ +P M +G YSF F ++L TF++ ++LPET G + E+Q A
Sbjct: 215 EAGHFVAAAAVQKPSETSEKVGSQSAVSEMFADRKIRLLVVSAIVLQVSQQLCGINAVFYYSNMFFEGVIDNPLVGTTVVGAVNVAATYVALLLMDSCGRRTLIMWSSGIMFLSCIIIVLSLLEYFGHMVALLFVNVYVIFFEIGMGPIPWLIVAEMFDAKYVATAMSVSSQVNWFCNFLIGLAFPYMNKYLGAYSFAPFAAVLAGTFVYAAIWLPETQGTTPQELQAA 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62184.13788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62184.13788.1 >prot_H-elongata_contig62184.13788.1 ID=prot_H-elongata_contig62184.13788.1|Name=mRNA_H-elongata_contig62184.13788.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp QIEIQHIVQASKAQRTIHNSAHSKGAVMDLFTDSRQRLLVISFVILHAAQback to top mRNA from alignment at H-elongata_contig62184:1..1651- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62184.13788.1 ID=mRNA_H-elongata_contig62184.13788.1|Name=mRNA_H-elongata_contig62184.13788.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1651bp|location=Sequence derived from alignment at H-elongata_contig62184:1..1651- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62184:1..1651- >mRNA_H-elongata_contig62184.13788.1 ID=mRNA_H-elongata_contig62184.13788.1|Name=mRNA_H-elongata_contig62184.13788.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig62184:1..1651- (Himanthalia elongata Himel1 dioecious)back to top |