mRNA_H-elongata_contig62136.13780.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 215 bits (548), Expect = 3.820e-61 Identity = 125/320 (39.06%), Postives = 182/320 (56.88%), Query Frame = 1
Query: 67 EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVF-RRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKT-SIIPSVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
+P ++ EA S EWP+WK AI +EM + G + +VE PK ++G++ VF+ K + + IE YK RLVAQGF QV GI + E+ +P ASI ++L++ A WE Q+DV +YL D+EEEIY++ P + K+ V LK+ +YGL SG + K EL R + D CVF R V+I +I + VDD +A TK R++ + F + DLGE + LG + RDR+ TL+ QH YI + RF + S+ + G LS P T + E+++ IPYRE++G+LM+AA TRPD
Sbjct: 111 DPASLNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPD 429
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 218 bits (555), Expect = 5.480e-60 Identity = 128/320 (40.00%), Postives = 183/320 (57.19%), Query Frame = 1
Query: 67 EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVF-RRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKT-SIIPSVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
+P ++ EA S EWP+WK AIA+EM + G + +VE PK ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P ASIR++L++ A WE Q+DV +YL D+EEEIY+ P + K+ V LK+ +YGL SG + K EL R + D CVF R V+I +I + VDD +A TK R++ + F + DLGE + LG + RDR+A TL+ Q YI + RF + S+ + G LS P T + E+++ IPYRE +G+LM+AA TRPD
Sbjct: 921 DPASLNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPD 1239
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 218 bits (554), Expect = 7.430e-60 Identity = 124/341 (36.36%), Postives = 189/341 (55.43%), Query Frame = 1
Query: 4 ALYGTLGEDVLTCGS-ARQLGPEPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTSIIPSVAKGKALSKSDSPQTDGEVEEIRQI---PYREIVGALMWAATMTRPD 1014
ALY T L G G EP ++ EAQASPEWP+W++A+ E D G W++ + PK + +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P SIR +L++ WE Q+DV +YL D++EEIY+ PE + D ++ L+K +YGL SG W + EL ++R +ADPCV+ + +I V+VDDLL+ + + + E+ RDL F + DLGE +G I RDR AG + Q YI+++ R+ + + + G L + + + E EE Y +VG+LM+AA TRPD
Sbjct: 888 ALYAT----ALASGDRTASAGDEPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKRYQLENANAV-----GMPLDPNVAFTAEDENEEADDRLAGGYASMVGSLMYAAVGTRPD 1219
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 217 bits (552), Expect = 1.400e-59 Identity = 128/335 (38.21%), Postives = 183/335 (54.63%), Query Frame = 1
Query: 25 EDVLTCGSARQLGPEPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKG--IHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTSIIP-SVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
ED L A Q G +P T+ EA+ SP+WPQW+RAI E D V+ +VE P ++G+++VF+ K D +G + +K RLVAQGF QV G H +E+ +P SIR +LS+ A WE RQ+DV +YL +EE +Y+ LP + + V LKK +YGL +G W KT +E F R AD VF + G ++ VDDL + + + AV D+ F + DLG+ + LG + RDR A T+ Q YI T+ RF + + + + + G L SP T + E++R +PYRE VG+LM+AA TRPD
Sbjct: 1013 EDELVSAYAIQAGQDPRTLEEARQSPDWPQWQRAIDAEYDNLRRHDVFDLVEPPPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYK-REGESAIIVAASVDDLTITGTSDLVDAFAV-DIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPD 1345
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR) HSP 1 Score: 204 bits (520), Expect = 7.330e-59 Identity = 113/319 (35.42%), Postives = 185/319 (57.99%), Query Frame = 1
Query: 67 EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTS-IIPSVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
+P++ EA S + +W A+ E++ VW++VE G +G + V+K K+D +G +E++K RLVA+G+ Q +GI Y+E+ SP + S+R+V++++A E Q+DV ++L ++ E++Y+ PE ++ K+ V LKK+ YGL + W F ++ F Q D C + + + G A++V+YVDD+L+AS + ++ R L S F +KDLGEASY +G I RDR +GTL Q YI + R+ + S ++ V KG P+T+ E E++R IPY +VG++M+A TRPD
Sbjct: 35 DPSSYNEAITSDQSSEWHNAMIDELESMDKNNVWELVELLNGAKPVGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYLK-MSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPD 352
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 214 bits (546), Expect = 8.640e-59 Identity = 122/338 (36.09%), Postives = 188/338 (55.62%), Query Frame = 1
Query: 4 ALYGTLGEDVLTCGSARQLGPEPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTSIIPSVAKGKALSKSDSPQTDGEVEEIRQIP-YREIVGALMWAATMTRPD 1014
A + T+ + G ++ P ++ EA+ASPEW +WK+A+ EM G + + P G+ +G + VF +K D+DG I +YK RLVAQG+ Q+ G+ Y E+ +P S+R L + A E Q+DV +YL ++EEEIY+ PE Y D +V L+K +YGL SG W + F +L F + +AD CV++RI G + +I V+VDDLL+ S T D + +L + F +KDLGE +G I RDR GT++ Q QYI+ + RFG+ + + + K +TD V + + Y+ ++G+L++AA TRPD
Sbjct: 857 ANFATIRSYLAGAGDDIKIDNFPRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKEDLPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKK---RTDDLVADPAMVGGYQSVIGSLLYAARGTRPD 1190
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 214 bits (544), Expect = 1.560e-58 Identity = 125/337 (37.09%), Postives = 193/337 (57.27%), Query Frame = 1
Query: 25 EDVLTCGSARQLGP----EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELP--EAYRDSRKQVGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTSIIPS-VAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
EDV+ A +G EP+ EA+ P+WP+W+ AI E+D A G W++V RP V+ ++ V + K + G I+KYK RLVA+GF QV G+ Y ++ +P +SIR++L++ A GW A D + +YL + ++E++Y+E P A+ D + V L+KA+YGL G W +T L F R +AD VF + G + V+ V+VDD L+ +++R + + + + I DLG S+ LG I+ D AGTL+ QH YI+ + RF T + + + LSK+ P++ EV +R++PYRE +GALM+AA TRPD
Sbjct: 780 EDVVELAMAAAMGDAECVEPS-YAEAKKRPDWPKWQEAIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYK-HEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPD 1114
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A8J6H820_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6H820_TENMO) HSP 1 Score: 212 bits (540), Expect = 5.520e-58 Identity = 116/327 (35.47%), Postives = 187/327 (57.19%), Query Frame = 1
Query: 67 EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRD------SRK----QVGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTS-IIPSVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
+P T+ EA +SPE WK+A+ E + W +V+RP+GK + +R V + K KDG +++ K RLVA+GF Q GI + E+ +P SIR+ +++ LG + QLD +YL ++EEE+++E+P + D SRK +V L++KA+YGL SG W K +L+ + + +DPCV+ HG ++ ++V+YVDDL+VAS R ++ +L F +KDLG S+ LG T+D T+T Q +YI+ RF + + + + LSK P+T+ E + + +PY+ ++G+LM+ A TRPD
Sbjct: 517 DPQTVSEALSSPEAADWKKAMNAEYEALKRNQTWIIVDRPQGKKTVESRWVLRTKFKKDGSVDRRKARLVAKGFTQKPGIDFNETFAPVARLGSIRLFMAIAVELGLQVHQLDFASAYLNGEIEEEVFMEVPSDFYDILNEKESRKFRGNKVCLIRKALYGLKQSGRQWYKKLDEKLKQQKLKPLNSDPCVYINKEHGNIV-IVVIYVDDLMVASDNPRKLQRLKSELSKSFEMKDLGPLSFCLGIEFTQDVKKQTITMSQSKYIKETLSRFNMENCKGVTTPINPNEKLSKEMWPKTEEEKKAVEMLPYQSLLGSLMYLAVSTRPD 842
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR) HSP 1 Score: 206 bits (523), Expect = 7.450e-58 Identity = 113/319 (35.42%), Postives = 185/319 (57.99%), Query Frame = 1
Query: 67 EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVFRRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKTS-IIPSVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
+PTT +A + QW A+ E+ VW + E P G +G + V+K K+D +G IE+YK RLVA+G+ Q +GI Y+E+ SP + S+R+V++++A E Q+DV ++L D+ E+++++ PE + K+ V L K++YGL + W F ++ +F + Q D C++ +I G ++V+YVDD+L+AS ++ R L + F +KDLGEASY +G I R+R+ GTL Q YI+ + RF + + S + V KG P+++ E++++R IPY +VG+LM+A TRPD
Sbjct: 109 DPTTFKDAMNCDQSTQWLDAMKDELKSMKTNNVWTLTELPTGAKPVGCKWVYKTKLDPNGNIERYKARLVAKGYTQREGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLHEDVFMKQPEGFEPKGKEHMVCKLNKSIYGLKQASRQWYIKFDEVMKKHNFIKNQVDQCIYLKI-SGSKFVILVLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPD 426
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY) HSP 1 Score: 211 bits (538), Expect = 9.640e-58 Identity = 126/320 (39.38%), Postives = 180/320 (56.25%), Query Frame = 1
Query: 67 EPTTMGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW*KTFGIELEPKSFQRFQADPCVF-RRILHGVVIAVIVVYVDDLLVASATKRDEEKAVRDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTFDQHQYIQTMAGRFGVTKT-SIIPSVAKGKALSKSDSPQTDGEVEEIRQIPYREIVGALMWAATMTRPD 1014
+P ++ EA S EWP+W AIA+EM + G + +VE PK ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P ASIR++L++ A WE Q+DV YL D+EEEIY+ P + K+ V LK+ +YGL SG + K EL R + D C+F R V+I +I + VDD +A TK R++ F + DLGE + LG + RDR+A TL+ Q YI + RF + S+ + G LS P T + E+++ IPYRE +G+LM+AA TRPD
Sbjct: 744 DPASLNEAMQSTEWPKWTEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPD 1062 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62136.13780.1 >prot_H-elongata_contig62136.13780.1 ID=prot_H-elongata_contig62136.13780.1|Name=mRNA_H-elongata_contig62136.13780.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp MGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRback to top mRNA from alignment at H-elongata_contig62136:2..1015- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62136.13780.1 ID=mRNA_H-elongata_contig62136.13780.1|Name=mRNA_H-elongata_contig62136.13780.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1014bp|location=Sequence derived from alignment at H-elongata_contig62136:2..1015- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62136:2..1015- >mRNA_H-elongata_contig62136.13780.1 ID=mRNA_H-elongata_contig62136.13780.1|Name=mRNA_H-elongata_contig62136.13780.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=936bp|location=Sequence derived from alignment at H-elongata_contig62136:2..1015- (Himanthalia elongata Himel1 dioecious)back to top |