mRNA_H-elongata_contig62135.13779.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: A0A6H5JCU3_9PHAE (Store-operated calcium entry-associated regulatory factor n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCU3_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.340e-57 Identity = 138/281 (49.11%), Postives = 157/281 (55.87%), Query Frame = 3
Query: 3 GGCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPR---------------KDHQSYGEGTRPSWDGREPRWPRVAGE--WNRDFGSRLVTWAVLGIIGYVLYSVFKDAIAPGEARTGRPRPPSGG---------------------------------TDXXXXXXXXXXXXXXXDNWRGSRPSDSSYMKSAPTAAPAPVAAGNGLMSALAAGGIGAALGYMMRPRQPRYAQA-GFNTWNQGYGGG 692
GGC WTP +VQCYNMGSDG DAAWKCEA+MP+GYSFSS+EVGCEGYDYP+DPYILKDSCQL+YSL +S+ +G P+WDGR GE RDFGSRLVTWAVLG++GYVLY+ F A A T P GG XXXXXXXXXXXXXXX G+ P+ S+ A G G+ LA GGIGAALGYM+RPR R+A A G WNQGYG G
Sbjct: 65 GGCQEWTPQVVQCYNMGSDGTDAAWKCEANMPDGYSFSSVEVGCEGYDYPDDPYILKDSCQLIYSLKASPVNGGGRGGVGDDGWGSSARSWEDGNNPTWDGRPAGRKHGRGEVGTGRDFGSRLVTWAVLGVVGYVLYNTFLRA-----AET-----PFGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTAPATSA------------TAQGGGMFPWLAGGGIGAALGYMLRPRHRRHAPARGGMAWNQGYGTG 323
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: A0A6T5NZL0_HETAK (Store-operated calcium entry-associated regulatory factor n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NZL0_HETAK) HSP 1 Score: 118 bits (295), Expect = 5.980e-28 Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 3
Query: 3 GGCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQSYGEGTR 245
GGCG WTP++VQC N+G+DG+DA WKC+A MP+GY F I+VGCEGYD+PEDPYIL SCQL+Y L K Q+ G R
Sbjct: 68 GGCGDWTPDVVQCRNVGTDGVDANWKCDAEMPQGYRFGQIQVGCEGYDHPEDPYILPGSCQLMYEL----KGSQARGGAAR 144
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: UPI0003F0907E (store-operated calcium entry-associated regulatory factor-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0907E) HSP 1 Score: 114 bits (284), Expect = 4.680e-26 Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQS------YGEGTRPS---WDGREPRWPRVAGEWNRDFGSRLVTWAVLGIIGYVLY 362
GCG +TP +VQCYN GSDG D W+C+ M Y F ++V CEGY+YP+DPYILK SC L Y+L + ++ +Q YG+ ++G+ +W + + + +V W ++G+I Y +Y
Sbjct: 62 GCGTFTPQVVQCYNQGSDGYDVQWECKTDMDNAYRFGQVQVSCEGYEYPDDPYILKGSCGLEYTLDLTKEGNQQQHKHNYYGDDXXXXXSYYEGKHHKWKKES------WLGYIVMWVIIGVIVYAIY 183
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: A0A261XY99_9FUNG (Store-operated calcium entry-associated regulatory factor n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XY99_9FUNG) HSP 1 Score: 113 bits (282), Expect = 6.610e-26 Identity = 61/153 (39.87%), Postives = 85/153 (55.56%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSL-------SIPRKDHQSYGEGTRP--SWDGREPRWPRVAGEWNRD-FGSRLVTWAVLGIIGYVLYSVFKDAIAPGEARTGRPRP-PSGG 431
GC + P +VQCYN+G DG D W+CEA +P+G F +EV CEGYDYP+DPYILK SC L YSL S D Y ++P ++D W +W+ D + ++ G+ Y++YS+++ P +R RP P PSGG
Sbjct: 63 GCAPYVPEVVQCYNVGWDGTDVQWRCEADLPKGIKFGDVEVSCEGYDYPDDPYILKGSCGLSYSLIGTERRESDVANDDPRYFPQSKPLFTYD-----WASTKKKWDMDRLIGKAFSYLWAGVALYIVYSIYQGIRHPQSSRR-RPSPYPSGG 209
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: A0A7I8VAE0_9ANNE (Store-operated calcium entry-associated regulatory factor n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VAE0_9ANNE) HSP 1 Score: 112 bits (280), Expect = 1.310e-25 Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQSYGEGTRPSWDGREPRWPRVAG--EWNRDFGSRLVTWAVLGIIGYVLYSVFKDAIAPGEARTGRPRP 419
GC + P VQCYN GSDG D W+C+ M Y F IEV CEGYDYP+DPY+LK SC L Y+L ++ H+ + + ++ +P + + +G + + GS L LGII +V+Y ++K ++ P P
Sbjct: 60 GCSSFIPQTVQCYNRGSDGYDVQWECKTDMDNEYRFGKIEVSCEGYDYPDDPYVLKGSCGLEYTLDYTKEGHEK--KNHQHNYGYNKPHYHKQSGYSQHHHSEGSMLGHIVTLGIIAFVIYVIYKTCLSTNHQAEDAPPP 197
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: R7TVZ9_CAPTE (Store-operated calcium entry-associated regulatory factor n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TVZ9_CAPTE) HSP 1 Score: 109 bits (273), Expect = 1.920e-24 Identity = 90/289 (31.14%), Postives = 129/289 (44.64%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQ---SYGEGTRPSWDGREPRWPRVAGEWNRDFGSRLVTWA----VLGIIGYVLYSVFKDAIAP------GEARTGRPRPPSGGTDXXXXXXXXXXXXXXXDNWRGSRPSDS----SYMKSAPTAAPAPVAAGNGLMSALAAGGIGAALGYMMRPRQPR-YAQAGFNTWNQGYGGGNXXXXXXXXXAGAYRRRSGGXXX--NSMGLR--AGYGATSRR 806
GC + P +VQC N G+DG D W+C+A + Y F IEV CEGYD+P+DPYIL+ SC L YSL + ++ +Q ++ + + G + GS +W +L I+G ++Y+++ IAP G PR P GG + G SD+ SY P A AG G + A GG+ +GY+ R + Y A N+W G+GG + G+ R GG X S G R +G+G T RR
Sbjct: 65 GCSSYVPPVVQCRNQGTDGYDIQWECKADLDNAYRFGKIEVTCEGYDHPDDPYILRGSCGLEYSLEMTKEGYQQQHTHNSHQQSGYHGXXXXGGYFSNHHGHKKGS---SWMGDLILLAIVGVIIYAIYYTCIAPPPQQSAGTGTGSTPRYP-GGPPSGPRGSPPPYGFRDDYSQGGGGCSDTYGGQSYSSGTPGAN-----AGGGFWTGAATGGL---MGYLFGSRTNQSYHHAPTNSWGSGWGG-SRTTYSTPSFGGSSRGFGGGSFXXXGSTGTRTASGFGGTRRR 340
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: UPI000719E38D (store-operated calcium entry-associated regulatory factor-like isoform X1 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E38D) HSP 1 Score: 108 bits (271), Expect = 3.480e-24 Identity = 47/127 (37.01%), Postives = 76/127 (59.84%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQSYGEGTRPSWDGREPRWPRVAGEWNRDFGSRLVTWAVLGIIGYVLYSVFKDAIA 386
GC +TP +VQCYN GSDG D W+C++ M Y F +++V CEGY+YP+DPYILK SC L Y+L + ++ HQ G+G + ++ + + S + +L I+G ++Y ++K ++
Sbjct: 67 GCKGFTPQVVQCYNRGSDGFDVQWECKSDMDNAYRFGTVQVLCEGYEYPDDPYILKGSCGLQYTLDLTKEGHQQAGKGHQ-NYYNEHGSGSSSSQSYPAQKSSAIGDVVMLIIVGLIIYGIYKTCVS 192
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: UPI000F555E88 (store-operated calcium entry-associated regulatory factor-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F555E88) HSP 1 Score: 108 bits (269), Expect = 6.720e-24 Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKD-------HQSYGEGTRPSWDGREPRWPRVAGEWNRDFGSRLVTWAVLGIIGYVLYSVF 371
GC +TP++VQCYN GSDG D W+C+ M Y F I V CEGYDYP+DPYILK SC L Y++ + H + + T +++ R R +G W S ++TW V+ I Y +Y F
Sbjct: 69 GCSAFTPSVVQCYNRGSDGYDVQWECKTDMDSQYKFGEITVSCEGYDYPDDPYILKGSCGLEYTIDMVSSGSYYHNNYHSGHKDNTYHNYNSHSYR-SRHSGGWL----STIITWGVIAWIVYYIYQRF 192
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: A0A267DFU2_9PLAT (Store-operated calcium entry-associated regulatory factor n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DFU2_9PLAT) HSP 1 Score: 106 bits (264), Expect = 6.770e-24 Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 3
Query: 24 PNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQSYGEGTRPSWDGREPRWPRVAGEWNRDFGSRLVTWAVLGIIGYVLYSVF 371
P+ VQCYN GSDG+D WKCEA +P+ F ++V CEGYDYP+DPYIL SC L YSL + G + S G + R R A + + S ++ AVL I GY +Y+ F
Sbjct: 64 PSSVQCYNQGSDGIDVQWKCEAQLPKSTQFDKLQVQCEGYDYPDDPYILAGSCGLTYSLK------PAGGSRSHKSRSGHKSRSHRQAASDSDNSVSPVIVIAVLAIAGYCIYAFF 173
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Match: A0A8B7Y5R0_ACAPL (Store-operated calcium entry-associated regulatory factor n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y5R0_ACAPL) HSP 1 Score: 108 bits (270), Expect = 6.860e-24 Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 3
Query: 6 GCGMWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYILKDSCQLVYSLSIPRKDHQSYGEGTRPSWDGREPRWPRVAGEWNRDFGSRLVTWAVLGIIGYVLYSVFKDAIAPGEARTGRP 413
GC + P +VQCYN GSDG D W+C+ M Y F IEV CEGY+ P+D Y+LK SC L Y+L + ++ QS + S+ G + + + + +R S + W L IIG ++Y V++ IA RP
Sbjct: 88 GCSAFRPQVVQCYNRGSDGYDIQWECKTDMDNSYRFGQIEVTCEGYNSPDDEYVLKGSCGLEYTLDLTKEGMQSQKYQNQHSYYG-DDGYHSSSYQGHRRKSSSIGDWITLAIIGVIIYGVYRSCIATSTHNPDRP 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62135.13779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig62135.13779.1 >prot_H-elongata_contig62135.13779.1 ID=prot_H-elongata_contig62135.13779.1|Name=mRNA_H-elongata_contig62135.13779.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp MWTPNIVQCYNMGSDGLDAAWKCEASMPEGYSFSSIEVGCEGYDYPEDPYback to top mRNA from alignment at H-elongata_contig62135:238..1979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig62135.13779.1 ID=mRNA_H-elongata_contig62135.13779.1|Name=mRNA_H-elongata_contig62135.13779.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1742bp|location=Sequence derived from alignment at H-elongata_contig62135:238..1979- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig62135:238..1979- >mRNA_H-elongata_contig62135.13779.1 ID=mRNA_H-elongata_contig62135.13779.1|Name=mRNA_H-elongata_contig62135.13779.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1590bp|location=Sequence derived from alignment at H-elongata_contig62135:238..1979- (Himanthalia elongata Himel1 dioecious)back to top |