prot_H-elongata_contig62022.13767.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62022.13767.1
Unique Nameprot_H-elongata_contig62022.13767.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length149
Homology
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: D8LF37_ECTSI (S1 motif domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF37_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.340e-85
Identity = 126/137 (91.97%), Postives = 133/137 (97.08%), Query Frame = 0
Query:   12 VSQPRRSRAADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKPV 148
            VSQP+R+RAADQVIQVGD VMGRVTRIS RQAWVEIICVGETVLREPHRG+VRKEDIRATEVDKA++A SLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKS+AG+IMIPI WQEMQCPTTKEKEPRKCAKPV
Sbjct:   54 VSQPKRARAADQVIQVGDTVMGRVTRISTRQAWVEIICVGETVLREPHRGIVRKEDIRATEVDKAEVAKSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSAAGAIMIPISWQEMQCPTTKEKEPRKCAKPV 190          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A835YI70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI70_9STRA)

HSP 1 Score: 177 bits (448), Expect = 8.780e-54
Identity = 83/129 (64.34%), Postives = 104/129 (80.62%), Query Frame = 0
Query:   20 AADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSA-GSIMIPIGWQEMQCPTTKEKEPRKCAKP 147
            A DQVI+VGD+VM RVTR+    A VEI+C GETVLRE + G+++KED+RATEVD+  +  S RPGDI+RARV SLGD+ QY+L+TA  +LGVRWAKS A G+IM+P+ WQEMQCP T  +EPRKCA+P
Sbjct:   61 AQDQVIEVGDVVMARVTRVRALLASVEILCAGETVLREAYNGIIKKEDVRATEVDRVDMGQSFRPGDIVRARVSSLGDARQYYLTTAAPDLGVRWAKSDASGAIMVPVSWQEMQCPVTGVREPRKCARP 189          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: H6WBA8_VAULI (S1 motif domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA8_VAULI)

HSP 1 Score: 155 bits (393), Expect = 1.870e-45
Identity = 71/125 (56.80%), Postives = 96/125 (76.80%), Query Frame = 0
Query:   23 QVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKP 147
            Q+++VG +VMGRVTR+    A V+I+C G+ VLRE  +G++RKED+R+TEVDK  +    RPGDI+R +VISLG+S  YFLST+  +LGV WA+S AG +++PI W++MQCP TK  E RKCAKP
Sbjct:   61 QILEVGVVVMGRVTRVKNNLASVDILCAGKFVLREICQGIIRKEDVRSTEVDKVDMWKCFRPGDIVRTKVISLGNSRDYFLSTSGEDLGVSWARSEAGEVLVPISWEQMQCPKTKAVEFRKCAKP 185          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: D8S0J7_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S0J7_SELML)

HSP 1 Score: 146 bits (369), Expect = 9.570e-42
Identity = 70/133 (52.63%), Postives = 93/133 (69.92%), Query Frame = 0
Query:   16 RRSRAADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKPV 148
            RR +  D V + G  V  ++T++  R A  +I+CVG   ++E   G+VR++D+R TE+DK  + SS RPGDIIRA VISLGDS  Y+LSTA+NELGV  A S AG+ M+ + WQEMQCP T ++EPRK AK V
Sbjct:   61 RREKERDAVPEAGSTVTAKITKVQARMASADIVCVGPRAVKEKFTGIVRQQDVRLTEIDKVDMHSSFRPGDIIRAEVISLGDSRAYYLSTAKNELGVVSAVSVAGATMVAVSWQEMQCPLTNQREPRKVAKVV 193          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A2R6WRL2_MARPO (S1 motif domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRL2_MARPO)

HSP 1 Score: 144 bits (364), Expect = 1.230e-41
Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 0
Query:   17 RSRAADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKPV 148
            R +    V + G +V  ++T++  RQA   I+CVG   +R+   G++R++D+RATE+DK  + +S RPGDI+RA VISLGDS  Y+LSTA+NELGV  A S AG+ M+P+ WQEMQCP T ++EPRK AK +
Sbjct:   16 REKERGAVPEPGTVVTAKITKLFPRQAAASIVCVGPRAVRDKFTGIIRQQDVRATEIDKVDMHTSFRPGDIVRAEVISLGDSRAYYLSTAKNELGVVSATSDAGAAMVPVSWQEMQCPITGQREPRKVAKVI 147          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A507EK70_9FUNG (S1 motif domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507EK70_9FUNG)

HSP 1 Score: 145 bits (367), Expect = 1.610e-41
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 0
Query:   12 VSQPRRSRAADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKPV 148
            V + +R+ AA  + +V  IV G+V R++ R A + I+ VGET   +  +GV+R +D+RATE DK QI +S RPGDI+RA VISLGDS  Y+LSTA+NELGV  A S AG+ MIPI W+EM CP TK  E RKCAKPV
Sbjct:   54 VPKSKRNMAAS-IPEVSSIVTGKVLRVNPRMATLSIMVVGETPCADNFQGVIRVQDVRATERDKVQIYNSFRPGDIVRAEVISLGDSRSYYLSTAKNELGVILATSPAGATMIPISWEEMVCPKTKVVENRKCAKPV 189          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A1X2GSF5_9FUNG (S1 motif domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GSF5_9FUNG)

HSP 1 Score: 145 bits (365), Expect = 2.880e-41
Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 0
Query:   24 VIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKPV 148
            V  VG+ + G++ R+S  QA V I+ VG+   +E   GV+R +D+RATE DK +I  S RPGDII+A VISLGD+  YFLSTA+NELGV +A S AG+ MIPI WQEMQCP TK  E RKCAKPV
Sbjct:   63 VPDVGNTITGKIIRVSPMQATVAIMVVGQVPCKEDFTGVIRIQDVRATEKDKVKIYQSFRPGDIIKAEVISLGDARSYFLSTAKNELGVIFATSLAGATMIPISWQEMQCPITKAIEFRKCAKPV 187          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A367KP09_RHIST (S1 motif domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KP09_RHIST)

HSP 1 Score: 143 bits (361), Expect = 3.100e-41
Identity = 75/139 (53.96%), Postives = 97/139 (69.78%), Query Frame = 0
Query:   11 QVSQPRRSRAADQ--VIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKP 147
            Q+   R SR  +Q  V +VG ++ G+V R+S  QA + I+ VG+   +E   G++R +D+RA E DK +I +S RPGDII+A VISLGD+  Y LSTA+NELGV +A S AG+ MIPI WQEMQCP TK  E RKCAKP
Sbjct:    3 QLPTMRVSREKEQSAVPEVGSVITGKVIRVSPTQAVIAIMVVGDMTCKEDFMGIIRTQDVRAAEKDKVKIYNSFRPGDIIKAEVISLGDARSYILSTAKNELGVIFATSVAGATMIPISWQEMQCPKTKTIELRKCAKP 141          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A397V822_9GLOM (S1 motif domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V822_9GLOM)

HSP 1 Score: 145 bits (365), Expect = 3.740e-41
Identity = 70/131 (53.44%), Postives = 95/131 (72.52%), Query Frame = 0
Query:   17 RSRAADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKP 147
            R +    V  VG I+ G+V R++ ++A V I+ VG    ++  +G++R +D+RATE DK +I +S R GDI+RA VISLGD+  Y+LSTA+NELGV +A+S AG++MIPI WQEMQC  TK  EPRKCAKP
Sbjct:   59 REKVHSAVPDVGSIITGKVIRMTTKEAVVSIMVVGNMPCKDDFQGIIRSQDVRATEKDKVKIYNSFRLGDIVRAEVISLGDARSYYLSTAKNELGVIYAQSVAGAVMIPISWQEMQCTKTKTMEPRKCAKP 189          
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Match: A0A8H7SFV1_9FUNG (S1 motif domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SFV1_9FUNG)

HSP 1 Score: 144 bits (364), Expect = 4.200e-41
Identity = 71/131 (54.20%), Postives = 92/131 (70.23%), Query Frame = 0
Query:   17 RSRAADQVIQVGDIVMGRVTRISIRQAWVEIICVGETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQYFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKP 147
            R +    V +VG ++ G+V R++   A + I+ VG+T  RE   G +R +D+RA E DK +I +S RPGDI+RA VISLGD+  Y+LSTA+NELGV +A S AG+ MIPI WQEMQCP TK  E RKCAKP
Sbjct:   57 REKEQSAVPEVGSVITGKVIRVAPHSALIAIMVVGDTPCREDFAGTIRTQDVRAVEKDKVKIINSFRPGDIVRAEVISLGDARSYYLSTAKNELGVIFATSVAGATMIPISWQEMQCPKTKTIEYRKCAKP 187          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62022.13767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF37_ECTSI1.340e-8591.97S1 motif domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YI70_9STRA8.780e-5464.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H6WBA8_VAULI1.870e-4556.80S1 motif domain-containing protein n=1 Tax=Vaucher... [more]
D8S0J7_SELML9.570e-4252.63Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
A0A2R6WRL2_MARPO1.230e-4150.76S1 motif domain-containing protein n=1 Tax=Marchan... [more]
A0A507EK70_9FUNG1.610e-4156.20S1 motif domain-containing protein n=1 Tax=Chytrio... [more]
A0A1X2GSF5_9FUNG2.880e-4159.20S1 motif domain-containing protein n=1 Tax=Hesselt... [more]
A0A367KP09_RHIST3.100e-4153.96S1 motif domain-containing protein (Fragment) n=1 ... [more]
A0A397V822_9GLOM3.740e-4153.44S1 motif domain-containing protein n=2 Tax=Gigaspo... [more]
A0A8H7SFV1_9FUNG4.200e-4154.20S1 motif domain-containing protein n=1 Tax=Mucor c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 18..148
e-value: 2.3E-50
score: 171.8
IPR019495Exosome complex component CSL4, C-terminalPFAMPF10447EXOSC1coord: 26..52
e-value: 5.3E-5
score: 23.8
coord: 56..95
e-value: 9.3E-10
score: 39.1
IPR039771Exosome complex component Csl4PANTHERPTHR126863'-5' EXORIBONUCLEASE CSL4-RELATEDcoord: 19..148
IPR003029S1 domainPROSITEPS50126S1coord: 28..106
score: 9.559
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 24..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62022contigH-elongata_contig62022:2286..3194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62022.13767.1mRNA_H-elongata_contig62022.13767.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62022 2286..3194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62022.13767.1 ID=prot_H-elongata_contig62022.13767.1|Name=mRNA_H-elongata_contig62022.13767.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp
KWRIDVFWRTQVSQPRRSRAADQVIQVGDIVMGRVTRISIRQAWVEIICV
GETVLREPHRGVVRKEDIRATEVDKAQIASSLRPGDIIRARVISLGDSTQ
YFLSTAENELGVRWAKSSAGSIMIPIGWQEMQCPTTKEKEPRKCAKPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019495EXOSC1_C
IPR039771Csl4
IPR003029S1_domain
IPR012340NA-bd_OB-fold