prot_H-elongata_contig62022.13766.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62022.13766.1
Unique Nameprot_H-elongata_contig62022.13766.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
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BLAST of mRNA_H-elongata_contig62022.13766.1 vs. uniprot
Match: D8LF36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF36_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.510e-38
Identity = 169/245 (68.98%), Postives = 188/245 (76.73%), Query Frame = 0 
Query:    6 VAQECWEAYHEKTAEKCLHCQGPVAHLPGRFSGKHFVSIDPPGKVHSECWEAFNRCRPPTXXXXXXXXXXXXXXXXXXXNYVELENGIKLHAECRAAYHNAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAVRKKEAFSGDFMLVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDRKPDDAGGEASQAKVHMECFEAYQAMLAAEGEGS 250
            + QECWE YHEK + KCLHC+GPVAHLPGRF+GK + S DPP          +   +P                     +YV L +GIK+H ECR+AYH    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KAVR+ E FSGDFM++DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDRK  DA GE +++KVHMECFEAYQA LA +G+GS
Sbjct:   45 IHQECWEKYHEKCSVKCLHCEGPVAHLPGRFNGKFYPSTDPPXXXXXXXXXXYKGSKPAAEKCGECGEPLSFVEGKFSGSYVTLGDGIKVHVECRSAYHQKHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAVRRMEGFSGDFMMIDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVDRKLGDAEGEDNESKVHMECFEAYQAQLAEKGKGS 289
[Close]
BLAST of mRNA_H-elongata_contig62022.13766.1 vs. uniprot
Match: A0A835YPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.070e-8
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0 
Query:    6 VAQECWEAYHEKTAEKCLHCQGPVAHLPGRFSGKHFV 42
            +  ECWE Y ++ AEKC+HC+GPVA +PGR+SGK F 
Sbjct:   44 IHTECWEVYQDRNAEKCMHCKGPVAQIPGRYSGKFFA 80
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62022.13766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF36_ECTSI1.510e-3868.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPW2_9STRA4.070e-859.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62022contigH-elongata_contig62022:103..2089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62022.13766.1mRNA_H-elongata_contig62022.13766.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62022 103..2089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62022.13766.1 ID=prot_H-elongata_contig62022.13766.1|Name=mRNA_H-elongata_contig62022.13766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
MFHAGVAQECWEAYHEKTAEKCLHCQGPVAHLPGRFSGKHFVSIDPPGKV
HSECWEAFNRCRPPTEKCSQCDEPLMNLAGKFSGNYVELENGIKLHAECR
AAYHNAKTEKCLQCSEPVAPEKGKFSGGYFEIEGKGRVHAECQDEYAEAT
ADKCLVCKKAVRKKEAFSGDFMLVDGGKVHKECASEYQEMMADKCLYCNK
GVRKTSDFSGAFYPVDRKPDDAGGEASQAKVHMECFEAYQAMLAAEGEGS
G*
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