prot_H-elongata_contig61923.13756.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61923.13756.1
Unique Nameprot_H-elongata_contig61923.13756.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length261
Homology
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BLAST of mRNA_H-elongata_contig61923.13756.1 vs. uniprot
Match: A0A6H5KDN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN2_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 1.150e-40
Identity = 105/220 (47.73%), Postives = 139/220 (63.18%), Query Frame = 0 
Query:   54 MNAALNAVVSDISVKIKQQEEERTAQDTENTNLREELQALVGRYEAETKASSEALQIQEKEIDVFDARLKISTDAAKKALEVHEGLTKDVEEVTTQENILRRRVGEHASRLKKLESGLKTRLESIQLLQVEKARLSVSVARLSKEKKIALSRLGLDIADAAGXXXXXXXDDSV------------VGEDRLKVLVHEMAEKTAELEKEKEGLQARCRELQ 261
            MNA+LNAVVSDIS KIK+QEEER AQD EN +LR +LQAL+  Y+    AS ++L+  E+E      RL+    AA+ +L   EGL K +  +   E +LR+RVGEHA+RL++ E+GLKT LES+Q LQ  + +L VS+ARLSKEK   L+R G  +    G   XXXX                +GED ++ L+ E  +  AE E+EK+ LQARCRELQ
Sbjct:    1 MNASLNAVVSDISKKIKEQEEERIAQDAENASLRSDLQALLQTYDENKAASEKSLRGHEEEGVKLAKRLESLAAAAQISLGREEGLRKAIGGLAEAEGVLRKRVGEHATRLERQEAGLKTYLESVQRLQANETKLLVSIARLSKEKTSLLARAGCLVVGGEGGVDXXXXXXXXXXXXXXXXXXEKLGEDGMRALLREKKQAAAEAEREKDRLQARCRELQ 220
[Close]
BLAST of mRNA_H-elongata_contig61923.13756.1 vs. uniprot
Match: D7G8F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F5_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 9.420e-27
Identity = 105/273 (38.46%), Postives = 138/273 (50.55%), Query Frame = 0 
Query:    1 MRAASEDCARETLRLEQAAVKLHALSVELDGRHRAVLKGRKEAAAEELEKREEMNAALNAVVSDISVKIKQQEEERTAQDTENTNLREELQALVGRYEAETKASSEALQIQEKEIDVFDARLKISTDAAKKALEVHEGLTKDVEEVTTQENILRRRVGEHASRLKKLESGLKTRLESIQLLQVEKARLSVSVARLSKEKKIALSRLGLDIADAAGXXXXXXX------------DDSVVGEDRLKVLVHEMAEKTAELEKEKEGLQARCRELQ 261
            MRA ++  ARE  RL QAA KL  LS ELDGR  A+L+ R   A +E  +REEMNA+LNAVVSDIS KIK+QEEER AQD EN +LR +LQAL+  Y+    AS ++L+  E+E      RL+  T A + +L   EGL K + E                   ++ E+                                 L+R G  +    G   XXXX            DD+ +GED ++ L+ E  +  AE E+EK+ LQARCRELQ
Sbjct:  244 MRAEADADAREAARLNQAAAKLQTLSGELDGRRTAMLEARNVEAGKETARREEMNASLNAVVSDISKKIKEQEEERIAQDAENASLRSDLQALLQTYDENKTASEKSLRGHEEEGVKLAKRLESLTAAVQISLGREEGLRKAIGEXXXXXXXXXXXXXXXXXXXERQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLARAGCLVVGGEGGIDXXXXXXXXXXXRSDRRDDAKLGEDGMRALLREKKQAAAEAEREKDRLQARCRELQ 516
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61923.13756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDN2_9PHAE1.150e-4047.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F5_ECTSI9.420e-2738.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableCOILSCoilCoilcoord: 236..261
IPR026183Taxilin familyPFAMPF09728Taxilincoord: 7..200
e-value: 1.9E-14
score: 53.6
IPR026183Taxilin familyPANTHERPTHR16127TAXILINcoord: 10..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61923contigH-elongata_contig61923:273..2472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61923.13756.1mRNA_H-elongata_contig61923.13756.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61923 267..2472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61923.13756.1 ID=prot_H-elongata_contig61923.13756.1|Name=mRNA_H-elongata_contig61923.13756.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
MRAASEDCARETLRLEQAAVKLHALSVELDGRHRAVLKGRKEAAAEELEK
REEMNAALNAVVSDISVKIKQQEEERTAQDTENTNLREELQALVGRYEAE
TKASSEALQIQEKEIDVFDARLKISTDAAKKALEVHEGLTKDVEEVTTQE
NILRRRVGEHASRLKKLESGLKTRLESIQLLQVEKARLSVSVARLSKEKK
IALSRLGLDIADAAGGGGEEGGDDSVVGEDRLKVLVHEMAEKTAELEKEK
EGLQARCRELQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026183Taxilin_fam