prot_H-elongata_contig61809.13741.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61809.13741.1
Unique Nameprot_H-elongata_contig61809.13741.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
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BLAST of mRNA_H-elongata_contig61809.13741.1 vs. uniprot
Match: A0A835YKK5_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKK5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.480e-5
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 VSSKSKIGHTPLHLACRFGHLPVVLLLLAEGADINARDN 39
            V +    GHTPLHLACR+GH+ V L LL +G DI+A D+
Sbjct:   25 VHAPHSAGHTPLHLACRYGHVSVALALLIKGCDIDACDS 63
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BLAST of mRNA_H-elongata_contig61809.13741.1 vs. uniprot
Match: A0A4Z1ED95_9HELO (Uncharacterized protein n=1 Tax=Botrytis tulipae TaxID=87230 RepID=A0A4Z1ED95_9HELO)

HSP 1 Score: 51.6 bits (122), Expect = 7.160e-5
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0 
Query:    1 VSSKSKIGHTPLHLACRFGHLPVVLLLLAEGADINARDND 40
            + + + IG T LHLACRF H  +V LLLA GA+I ARDND
Sbjct:  141 IETTNWIGETALHLACRFDHKNIVALLLAVGANIEARDND 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61809.13741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YKK5_9STRA1.480e-556.41Ankyrin repeat-containing domain protein (Fragment... [more]
A0A4Z1ED95_9HELO7.160e-560.00Uncharacterized protein n=1 Tax=Botrytis tulipae T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 8..23
score: 42.83
coord: 56..70
score: 32.48
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 40..69
e-value: 6.6E-5
score: 32.3
coord: 7..36
e-value: 1.3E-6
score: 38.0
coord: 73..102
e-value: 3.0E-4
score: 30.1
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 75..104
e-value: 6.1E-6
score: 26.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 7..39
score: 15.841
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 73..105
score: 11.461
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 13.651
NoneNo IPR availablePFAMPF13637Ank_4coord: 9..56
e-value: 2.5E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 38..127
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 8..81
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 38..127
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 8..81
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.512
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..136
e-value: 6.5E-44
score: 151.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..134
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..136
score: 41.805

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61809contigH-elongata_contig61809:1177..3144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61809.13741.1mRNA_H-elongata_contig61809.13741.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61809 1177..3144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61809.13741.1 ID=prot_H-elongata_contig61809.13741.1|Name=mRNA_H-elongata_contig61809.13741.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
VSSKSKIGHTPLHLACRFGHLPVVLLLLAEGADINARDNDHNTPLHKAAS
NGKTQLCRELVKRGADVDARNSAEYTPLHWACFKGHKGAAEQLLKCGANI
DATNSRRATGLFMSSYYGHGDITFLLIAWGKVPNVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom