mRNA_H-elongata_contig61797.13740.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE) HSP 1 Score: 178 bits (451), Expect = 3.290e-45 Identity = 138/428 (32.24%), Postives = 207/428 (48.36%), Query Frame = 1
Query: 19 DSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPEN--GLLEIKVRRHVTAKSRLPKTPTATALAA-TQRGPR-----DIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDILRDIINDYVAPEGLK--IGVIRTDGGGKWHG-QFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRSTPGHKLAPRGASCIMLG 1248
D+G A HMT A ++D P V GG ++ G L L+ + F+ + LK+V + PNLG ++ + FD L P G M F + +N G+L + + RL + T LAA T P+ D+ +FH + H + + R TA+ G +L C CS ++ + + + T++R+D+ GR+F+DL S+GG + M+ DDFTR + FLKHK+DA R + V +G+ + ++R+D GG++ G +F S +L IK++ T Y+ QYNGV ER LGL+ + +A L V K+D+LWAEAM +AC+ N S+ SPYE+WYG PR PF Y R P KL P+G SC +G
Sbjct: 528 DTGTAFHMTDSLACMKDLKPCHKS--VNGIGGVSCEISFSGTLELVFVTADSEFS-----MELKNVLYSPNLGYNLFSPSAE----FDGES----WNGLGGPD-GVMTAFKGQVTFQNFDGML-------IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 929
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 177 bits (450), Expect = 4.560e-45 Identity = 138/428 (32.24%), Postives = 207/428 (48.36%), Query Frame = 1
Query: 19 DSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPEN--GLLEIKVRRHVTAKSRLPKTPTATALAA-TQRGPR-----DIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDILRDIINDYVAPEGLK--IGVIRTDGGGKWHG-QFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRSTPGHKLAPRGASCIMLG 1248
D+G A HMT A ++D P V GG ++ G L L+ + F+ + LK+V + PNLG ++ + FD L P G M F + +N G+L + + RL + T LAA T P+ D+ +FH + H + + R TA+ G +L C CS ++ + + + T++R+D+ GR+F+DL S+GG + M+ DDFTR + FLKHK+DA R + V +G+ + ++R+D GG++ G +F S +L IK++ T Y+ QYNGV ER LGL+ + +A L V K+D+LWAEAM +AC+ N S+ SPYE+WYG PR PF Y R P KL P+G SC +G
Sbjct: 235 DTGTAFHMTDSLACMKDLKPCHKS--VNGIGGVSCEISFSGTLELVFVTADSEFS-----VELKNVLYSPNLGYNLFSPSAE----FDGES----WNGLGGPD-GVMTAFKGQVTFQNFDGML-------IASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 636
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 174 bits (441), Expect = 7.280e-44 Identity = 138/432 (31.94%), Postives = 202/432 (46.76%), Query Frame = 1
Query: 13 VNDSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPENGLLEIKVRRHVTAKSRLPKTPTATALAATQRG-------PRDIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDIL-RDIINDYVAPEGLKIGVIRTDGGGKW-HGQFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRST----PGHKLAPRGASCIMLG 1248
V D+GA HM + G Y + RV G P+ GYG + + + +G T L LK VAHVP L +++ T F+ + L R GG ++F P G L ++ +T T A AA G P DI FH GH E + R TA+ G L R C+ CS ++ +P T RA + R+F+DLS +SLGG + ++ DD+TR+ V FLKHK+DA + R + + + V+R+D GG++ G+F RK IK++ T ++ +YNGV ERALGL++D +A L G S LWAEA+A++C+ N +++S SPYE+W+G P PP T +L+ + HK P+ C LG
Sbjct: 370 VADTGATTHMFANSDGFVRYE--ECDRRVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRLDYNLVSLTSLFDDGFET--KTLNKHELELERGGGEVVYF----PRCGNLYVQNGF---------RTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 772
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 174 bits (441), Expect = 7.360e-44 Identity = 138/432 (31.94%), Postives = 202/432 (46.76%), Query Frame = 1
Query: 13 VNDSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPENGLLEIKVRRHVTAKSRLPKTPTATALAATQRG-------PRDIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDIL-RDIINDYVAPEGLKIGVIRTDGGGKW-HGQFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRST----PGHKLAPRGASCIMLG 1248
V D+GA HM + G Y + RV G P+ GYG + + + +G T L LK VAHVP L +++ T F+ + L R GG ++F P G L ++ +T T A AA G P DI FH GH E + R TA+ G L R C+ CS ++ +P T RA + R+F+DLS +SLGG + ++ DD+TR+ V FLKHK+DA + R + + + V+R+D GG++ G+F RK IK++ T ++ +YNGV ERALGL++D +A L G S LWAEA+A++C+ N +++S SPYE+W+G P PP T +L+ + HK P+ C LG
Sbjct: 383 VADTGATTHMFANSDGFVRYE--ECDRRVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRLDYNLVSLTSLFDDGFET--KTLNKHELELERGGGEVVYF----PRCGNLYVQNGF---------RTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 785
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 174 bits (441), Expect = 7.460e-44 Identity = 138/432 (31.94%), Postives = 202/432 (46.76%), Query Frame = 1
Query: 13 VNDSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPENGLLEIKVRRHVTAKSRLPKTPTATALAATQRG-------PRDIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDIL-RDIINDYVAPEGLKIGVIRTDGGGKW-HGQFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRST----PGHKLAPRGASCIMLG 1248
V D+GA HM + G Y + RV G P+ GYG + + + +G T L LK VAHVP L +++ T F+ + L R GG ++F P G L ++ +T T A AA G P DI FH GH E + R TA+ G L R C+ CS ++ +P T RA + R+F+DLS +SLGG + ++ DD+TR+ V FLKHK+DA + R + + + V+R+D GG++ G+F RK IK++ T ++ +YNGV ERALGL++D +A L G S LWAEA+A++C+ N +++S SPYE+W+G P PP T +L+ + HK P+ C LG
Sbjct: 526 VADTGATTHMFANSDGFVRYE--ECDRRVRVAAGETFPIVGYGDVTVTLSSRDG-----TTDLLLKRVAHVPRLDYNLVSLTSLFDDGFET--KTLNKHELELERGGGEVVYF----PRCGNLYVQNGF---------RTHTEHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYPS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 928
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.470e-43 Identity = 139/429 (32.40%), Postives = 202/429 (47.09%), Query Frame = 1
Query: 19 DSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPEN--GLLEIKVRRHVTAKSRLPKTPTATALAA-TQRGPR-----DIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDILRDIINDY---VAPEGLKIGVIRTDGGGKWHG-QFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRSTPGHKLAPRGASCIMLG 1248
D+G A HMT + ++D P V G VA G L L+ + F+ + LK+V + NLG +I + FD P G M F + +N G+L + + RL + T LAA T P+ DI +FH + H E + R TA+ G +L C CS S+ R + + T+ R+D+ GR+F+DL S+GG + M+ DDFTR + FLK+++DA R + + P ++I +R+D GG++ G +F S +L IK++ T Y+ QYNGV ER LGL+ + +A L V K+D+LWAEAM +AC+ N S+ SPYE+WYG PR PF Y R P KL P+G SC +G
Sbjct: 116 DTGTAFHMTDSLSCMKDLKPCHKS--VNGIGSVSCEVAFSGTLELVFVTADSEFS-----VELKNVLYSQNLGYNIFSPSAE----FDGESWNGPGGP-----DGVMTAFNGQVTFQNFDGML-------IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 517
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.300e-43 Identity = 107/293 (36.52%), Postives = 151/293 (51.54%), Query Frame = 1
Query: 418 RLPKTPTATALAA-TQRGPR-----DIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDILRDIINDYVAPEGLK--IGVIRTDGGGKWHG-QFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRSTPGHKLAPRGASCIMLG 1248
RL + T LAA T P+ DI +FH + H E + R TA+ G +L C CS S+ R + + T+ R+D+ GR+F DL S+GG + ++ DDFTR + FL++K+DA R + V G+ + ++R+D GGK+ G F S +L IK++ T Y+ QYNGV ER LGL+ + +A L V K+D+LWAEAM +AC+ N S+ SPYE+WYG PR PF Y R P KL P+G SC +G
Sbjct: 8 RLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVG 297
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.180e-41 Identity = 136/421 (32.30%), Postives = 199/421 (47.27%), Query Frame = 1
Query: 40 MTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPEN--GLLEIKVRRHVTAKSRLPKTPTATALAA-TQRGPR-----DIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDILRDIINDYVAPEGLK--IGVIRTDGGGKWHG-QFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRSTPGHKLAPRGASCIMLG 1248
MT + ++D P V GG VA G L L+ + F+ + LK+V + PNLG ++ + FD L P G M F + +N G+L + + RL + T LAA T P+ DI +FH + H E + R TA+ G +L C CS S+ R + + T+ R+D+ GR+F+DL S+GG + M+ DDFTR + FL++K+DA R + V G+ + ++R+D GG++ G +F S +L IK++ T Y+ QYNGV ER LGL+ + +A L V K+D+LWAEAM +AC+ N S+ PYE+WYG PR PF Y R P KL P+G SC +G
Sbjct: 1 MTDSLSCMKDLKPCHKS--VNGIGGVSCEVAFSGTLELVFVTADSEFS-----VELKNVLYSPNLGYNLFSPSAE----FDGES----WNGLGGPD-GVMTAFNGQVTFQNFDGML-------IASAYRLGEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 395
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.190e-41 Identity = 132/428 (30.84%), Postives = 201/428 (46.96%), Query Frame = 1
Query: 19 DSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPEN--GLLEIKVRRHVTAKSRLPKTPTATALAA-TQRGPR-----DIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDILRDIINDYVAPEGLK--IGVIRTDGGGKWHG-QFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRSTPGHKLAPRGASCIMLG 1248
D+G A HMT + ++D P V+ GG + G L L+ + F + L++V + PNLG ++ + FD Y + G M F + +N G+L ++ RL + LAA T P+ D+ +FH + H E + R TA+ G++L+ C CS S+ + + T+ R+D+ GR+F+DL S+GG + M+ DDFTR + FLK K+DA R + V +G+ + ++R+D GG++ G +F S +L IK++ T Y+ QYNGV ER LGL+ +A L V K+DRLWAEAM +AC+ N S+ SPYE+W+G P F Y R P KL P+G +C +G
Sbjct: 434 DTGTAFHMTDRLSCMKDLKPC--HKNVKGIGGVTCEIEFSGTLELVFVTADSQFP-----VELENVLYSPNLGYNLFSPSAE----FDGESWNY-----LGGPDGVMTAFNGHVTFQNLDGML-------ISPAYRLENNCVGSVLAALTPSNPKHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLAS-VRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEASHARPYP-FLKPAYCRWQRPS-KLLPKGEACFYVG 835
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE) HSP 1 Score: 166 bits (419), Expect = 5.170e-41 Identity = 133/425 (31.29%), Postives = 192/425 (45.18%), Query Frame = 1
Query: 13 VNDSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPLLVDQGNGNFTYSTRQLTLKHVAHVPNLGQHILLSTKRRLQFFDAPMRVYPTTALIRPRRGGMPLFFRPLRPENGLLEIKVRRHVTAKSRLPKTPTATALAATQRGPRDIMKFHQVLGHLAEKITRNTARMAGVQLSRIWRPCVHCSESRVRRYAVPKSTENRADRHAGRLFIDLSSPFHEKSLGGNRFIMLCIDDFTRFKMVRFLKHKNDATDIL-RDIINDYVAPEGLKIGVIRTDGGGKW-HGQFLSFLRKLGIKRDSTSPYTTQYNGVVERALGLLRDKTVA-------LLQGVMEGKSDRLWAEAMAYACDMWNRCTSSSLDSGNSPYELWYGRRPRFDNIPPFWTVGYLRRST----PGHKLAPRGASCIMLG 1248
V D+GA HM + G Y + RV G P+ GYG + + + G T L LK VAHVP L +++ T F D + RGG + P R N + R H T A A P +I FH GH E + R TA+ G L R C+ CS ++ +P T RA + R+F+DLS +SL G + ++ D +TR+ V FLKHK+DA + R + + + V+R+D GG++ G+F RK IK++ T ++ +YNGV ERALGL++D +A L G S WAEA+A+AC+ N +++S SPYE+W+G P PP T +L+ + HK P+ C LG
Sbjct: 396 VADTGATTHMFANSDGFVRYE--ECDRRVRVAAGETFPIVGYGDVTVTLSSRGG-----TTDLLLKRVAHVPRLDYNLVSLTSL---FDDGFQTKTLNKHELELERGGGESVYSP-RCGNLYVHNGCRTHTEHAY----TAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPS--FWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPKAQKCFYLG 798 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61797.13740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61797.13740.1 >prot_H-elongata_contig61797.13740.1 ID=prot_H-elongata_contig61797.13740.1|Name=mRNA_H-elongata_contig61797.13740.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=416bp SEFRVNDSGAAEHMTQDPAGLEDYTPASAEDRVESTGGTLLPVAGYGHLPback to top mRNA from alignment at H-elongata_contig61797:115..1362- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61797.13740.1 ID=mRNA_H-elongata_contig61797.13740.1|Name=mRNA_H-elongata_contig61797.13740.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1248bp|location=Sequence derived from alignment at H-elongata_contig61797:115..1362- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61797:115..1362- >mRNA_H-elongata_contig61797.13740.1 ID=mRNA_H-elongata_contig61797.13740.1|Name=mRNA_H-elongata_contig61797.13740.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2496bp|location=Sequence derived from alignment at H-elongata_contig61797:115..1362- (Himanthalia elongata Himel1 dioecious)back to top |