prot_H-elongata_contig6177.13736.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6177.13736.1
Unique Nameprot_H-elongata_contig6177.13736.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length769
Homology
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: D8LH86_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH86_ECTSI)

HSP 1 Score: 807 bits (2084), Expect = 3.680e-282
Identity = 457/658 (69.45%), Postives = 510/658 (77.51%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNAL----GGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKKLRITSDGIDASGESKKKIFDEDGSLVXXXXXXXXXXXVSALESFAKGKETASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREKHLTR 654
            +VEKLYRSR+TFGDGL+ALVISPTRELSLQIF+VLR+FGKHHQLSAGLITGGKKEFREEQAS++++NILVATPGRLLQHLEQTPGFDPS LQVLVLDEADRILD+GFR+QLNSILEYLPPSRQTMLFSATQTKS+KDLARLSL+KGNVEYVAVRAGKDECATPAKLVQNYVVC+LDKK+DVLLGFIKTH+KSKMIVF +SCAQVRFAFELLCALQPG PVMALHGKCKHARRTQIYLDF+R+PGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYN GGRALL+++PSEEEGV+AGLKP NIPIKRLTINP+KVRMAGSVGKKA+ALVASDPD KRLAEKSFTSYVRAV LMPNKQAFRLSELPLE+YAFSLGLA  PRV GL  AL     GGS   K+   G                       ARA+KNVNRSLQRLKEQIKA+K RKRLER+ K     E ++   +  K     V                     DGGLVLV+        +G  +E   ED     L RKR KK+RITSDG+ A+G + K++FDEDG+ V           +S L++FAK     +  AS A  A  LP A +A   YV R+KARL AV  +D+AR+R+     HL R
Sbjct:  106 LVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQASVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSIKDLARLSLRKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMMLPSEEEGVLAGLKPNNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAVQLMPNKQAFRLSELPLEEYAFSLGLAAAPRVPGLEKALVNIPSGGSGEDKKGGPGXXXXXXXXXXXXXX---------ARAKKNVNRSLQRLKEQIKADKLRKRLERKGKLE---EASKASLEPRKTKARAVKXXXXXXXXXXXXXXXXXXXXDGGLVLVQTERSEGVGSGAELE---EDGGAEELQRKRKKKMRITSDGVAAAGVATKRVFDEDGAAVDV---------ISPLQAFAKETGVPTGSASSASDAASLPAASEA---YVKRIKARLEAVDGEDKARDREXXXXXHLKR 736          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A836CCM6_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM6_9STRA)

HSP 1 Score: 545 bits (1405), Expect = 8.270e-181
Identity = 323/582 (55.50%), Postives = 392/582 (67.35%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSE-LPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDD--DFGPLPRKRVK--KLRITSDGID-ASGESKKKIFDEDGSLV 576
            ++EKL+R R TFGDGL ALV+SPTREL+LQIF+VLR  G  H LSAGLI GGK++F EEQA +   NIL+ATPGRLLQHLEQTPGFD S LQVLVLDEADR+LD+GFREQLNS+L YLP  RQTMLFSATQT+SVKDLARLSL +  VEY++           A+LVQNYVVC+L +K+DVL  F+KTHIKSK IVF SSCAQVRF  ELLCALQPG P++ALHGK K  +RTQIY D++RK  AVL ATD+AARGLDFP+VDWVIQ DAPEDA  YIHR GRTARY  GGRALL+L+PSEE+G++A L  + IPI RLT+NPDK+R AGSV  +A++ VA+D D +RLAEK+F SYVR+V LMP+++ F   E L L  +A SLGL   PR+ G   A                            V+ +  REE RA+KNVNRSLQRLKEQI+AE+  KR +RE      +  A     K K   +      GG     D   S + D  G  +LV   VK   + G   +G   D+  D     +K+ K  K RI  +GI  A+  + K +F+E G  V
Sbjct:  103 LLEKLHRMRWTFGDGLGALVVSPTRELALQIFEVLRVVGGKHLLSAGLIVGGKRDFTEEQAMVSATNILIATPGRLLQHLEQTPGFDASQLQVLVLDEADRLLDMGFREQLNSVLTYLPLQRQTMLFSATQTRSVKDLARLSLNRDTVEYIS-----------AQLVQNYVVCELRQKLDVLYSFLKTHIKSKTIVFFSSCAQVRFVHELLCALQPGVPLLALHGKLKQQKRTQIYFDYVRKASAVLFATDVAARGLDFPAVDWVIQADAPEDAASYIHRAGRTARYKSGGRALLLLLPSEEKGMVAALSKQKIPITRLTVNPDKMRAAGSVTARASSAVAADADKRRLAEKAFHSYVRSVQLMPDRRTFGGGEGLDLAGFATSLGLPAPPRLKGAVIAAA--------------------------VEGEEGREEVRAKKNVNRSLQRLKEQIRAERALKRAQREG-----LSAAAPEAPKAKKTSASSAVLNGGSKSALDDGSSQSDDGSGDDLLV---VKSREVPGDASDGSGADEAADRARSRKKKAKEPKQRINQEGIAVAAAAATKVVFNEAGEGV 639          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: K3WGR9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGR9_GLOUD)

HSP 1 Score: 500 bits (1287), Expect = 3.090e-163
Identity = 310/662 (46.83%), Postives = 407/662 (61.48%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKKLRITSDGIDASGESKKKIFDEDGSLVXXXXXXXXXXXVSALESFAKGKETASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREKHLTRRMKGKDEK 662
            ++EKLYRSR    DGL ALVISPTREL+LQIF+VLR  GK H  SAGL+ GGK  F+EEQ  L+R+NIL+ TPGRLLQH+EQT  FDPS LQ+LVLDEADRILD+GF++QL SI+ YLP  RQTMLFSATQTKSVKDLA+LSL +   EY+AV   K   ATP+ L Q++VVC L++K+DVLL FIK+H+K K IVFLS+C QVRF  ++ C LQPG P++ALHGK K  +R +IY +FL KP AVL ATDIAARGLDFP VDWV+Q+D PED   YIHRVGRTARYNK G+ALL L+PSE +G+    +   IPIK + +NP K +   S  +K  ++VA+D D K L +K+F SYVR+V+L PN++ F  S+LPL+++A S GL   PR+  L                        M  + + V     REE R +KNVNR LQ LK++IKAEK+RKRLE++        L+   KDK+   Q++V  ++ G          D SD+D GL++V++                  D      +K+ KK+R+     D      + +FD++G+ +             A E      ++   +AS+A                     ARL     +DR  E++RVR KH  +RMK K E+
Sbjct:  105 ILEKLYRSRWDVEDGLGALVISPTRELALQIFEVLRSLGKAHSFSAGLVIGGKN-FKEEQYRLIRMNILICTPGRLLQHMEQTANFDPSNLQILVLDEADRILDMGFQQQLTSIVAYLPTERQTMLFSATQTKSVKDLAKLSLNEP--EYIAVHE-KSAQATPSGLAQSFVVCGLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHQVFCKLQPGVPLLALHGKYKQGKRVEIYYEFLNKPAAVLFATDIAARGLDFPQVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALLTLLPSEVDGMTKAFEDAKIPIKEIKVNPAKTQ---SSRQKVTSVVAADKDIKALGQKAFMSYVRSVYLQPNREVFDASKLPLDEFALSYGLPGAPRMPFLAK----------------------MKEDQQEV----MREELRGKKNVNRKLQMLKDKIKAEKERKRLEKQ--------LSSLKKDKK---QAEVTVEKDGSE--------DESDSDDGLMVVKRRHNWDKEGXXXXXXXXXXDLDASRKKKKAKKIRV-----DNEVSYNRVVFDDEGNSMKVLEKMAAQRLDDASEFADVEAKSKQFQASVA---------------------ARLREKDAEDRRLEKERVRAKHHKKRMKEKGER 688          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A6U3TUF8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TUF8_9STRA)

HSP 1 Score: 492 bits (1266), Expect = 2.240e-159
Identity = 309/672 (45.98%), Postives = 408/672 (60.71%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSR------QTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDF---GPLPRKRVKKLRITSDGIDASGESKKKIFDEDGSLVXXXXXXXXXXXVSALESFAKGKETASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREKHLTRRMKGKDEKE 663
            ++E LYRSR T  DG  A+V+SPTREL++Q F+VLR  G HH LSAGL+ GGKKEF  EQ  + R NIL+ATPGRLLQHLEQTP F+   ++VLVLDEADRILD+GFR Q+  +L+YLP  R      QTMLFSATQTK V DLA LSL K   EYV V   K+  ATP  L Q+Y+V  L+ K+D +  F+K+H++ K I+F SSC+QVR  +EL C LQPG P+MA+HGK    RRTQIY DFL+KP AVL ATD+A+RGLDFP+VDWV+Q DAPED + YIHRVGRTARYN GGR+LL+L+PSE+      LK   IPI +L+INP K  +  S   KA+++VAS P    LA+K+F SYVR VHLMPNK+ F +SEL L++YA SLGLA+ P++  L           K V+                      REE R +KNVN  LQ+LKEQIKAE+ ++RLER  K+      A D   KEK            G+              GG ++V+KN        G+ E   E+++    GP   +  K++RI      ++GE+K+  FD+DG+              + + + +   +   TK + A+          A   Y+ +V+ RL A  + D+A E++R+R KH  +R++ K E E
Sbjct:  132 LLESLYRSRYTPMDGPGAIVLSPTRELAVQTFEVLRSIGSHHDLSAGLLVGGKKEFGLEQMRVGRTNILIATPGRLLQHLEQTPNFNVDNVKVLVLDEADRILDMGFRNQMVRLLDYLPAGRKKGGDRQTMLFSATQTKRVADLAALSLDKP--EYVGVH-DKESSATPTSLRQSYIVVPLEHKLDAIFSFLKSHLQRKTIIFFSSCSQVRHTWELFCRLQPGVPLMAIHGKVSQERRTQIYFDFLKKPSAVLFATDVASRGLDFPNVDWVVQADAPEDMDMYIHRVGRTARYNAGGRSLLLLLPSEQVEFERLLKKSKIPIDKLSINPTKTVLVTS---KASSIVASSPQINALAKKAFQSYVRGVHLMPNKEMFVVSELNLDEYATSLGLASTPKMKFL-----------KEVKT---------------------REELRTKKNVNHKLQKLKEQIKAERLQRRLERLGKK------AEDEPKKEK------------GNXXXXXXXXXXXXTHGGFLVVKKNH-------GDTETTLEEEEIHLHGPSKSQLPKRIRIEGS---SAGENKRITFDDDGNEERTTIDELRKR--ADITNGSSDSDENVTKTTTAEENNAQDDLAGANEEYLRQVRKRLEATKEIDKAEEKERIRAKHKKKRIQDKGEME 735          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A8K1C504_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C504_PYTOL)

HSP 1 Score: 489 bits (1258), Expect = 6.630e-159
Identity = 266/465 (57.20%), Postives = 338/465 (72.69%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERE 465
            M+EKLYR R    DGL AL+ISPTREL+LQIF+VLR  GK H  SAGL+ GGK  F+EEQ  L+R+NILV TPGRLLQH+EQTP FD + LQ+LVLDEADRILD+GFREQL SI+ YLP  RQTMLFSATQTKSVKDLA+LSLK+   EY+AV   K   ATP+ L Q+Y+VC L++K+DVL  F+++H+K K+IVFL++C QVR+ + L C LQPG P+ +LHGK K  +R ++Y +FL KP  VL ATDIAARGLDFP+VDWV+Q+D PED   YIHRVGRTARYNK G+AL+ L+PSE E +   L    IPIK + +NP K +   S  +K A++VA+D D K LA+K+F SYVR+V LMP K  F  S+LPLE+YA SLGL   PR+  L           ++++  DV             D+++ R+E R++KNVNR L +LKE+IKAEK +K+L+RE
Sbjct:  107 MLEKLYRLRWDVEDGLGALIISPTRELALQIFEVLRSVGKTHTFSAGLVIGGKN-FKEEQYRLIRMNILVCTPGRLLQHMEQTPDFDAANLQLLVLDEADRILDMGFREQLTSIVSYLPRERQTMLFSATQTKSVKDLAKLSLKEP--EYIAVHE-KSTQATPSGLQQSYIVCPLEQKLDVLFSFLRSHLKQKIIVFLATCRQVRYIYSLFCKLQPGIPLCSLHGKYKQGKRVEVYYEFLNKPACVLFATDIAARGLDFPNVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALMCLLPSESEAMKKHLDDSKIPIKEIKLNPAKTQ---SCRQKVASVVAADKDIKALAQKAFMSYVRSVFLMPLKDVFDASQLPLEEYAVSLGLPGAPRMPFL-----------EKLKTQDV-------------DHEKLRDELRSKKNVNRKLAQLKEKIKAEKAKKKLDRE 540          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: W2QKL7_PHYPN (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2QKL7_PHYPN)

HSP 1 Score: 486 bits (1251), Expect = 7.790e-158
Identity = 274/467 (58.67%), Postives = 335/467 (71.73%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERE 465
            ++EKL+R R +  DGL ALVISPTREL+LQIF+VLR+ GK H  SAGL+ GGK  FREEQ  LVR+N+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILDLGF++QL SILE+LPP+  RQTMLFSATQTKSVKDLA LSL++   EYVAV       ATP  L Q+YVV  L++K+DVLL FIK+H+K K IVFLS+C QVRF   + C LQPG P+ ALHGK K  +R ++Y +FL KP AVL ATDIAARGLDFP VDWV+Q+D PEDA  YIHRVGRTARYNK G+AL+ LVPSE +G+M  L+   +PI+   +NP K     S  +K A++VA D + K LA+K+F SYVR+V+L P+++ F  + LPL+ +A SLGL   PR+  L                        M  E EN  N+  REE R +KNVNR LQ+LKE+IKAEK+RKRL R+
Sbjct:  121 VLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHAFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLREP--EYVAVHEHSAN-ATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTT---SCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSK----------------------MKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERKRLARQ 558          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: W7TN44_9STRA (Atp-dependent rna helicase dbp4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN44_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 1.380e-157
Identity = 255/413 (61.74%), Postives = 308/413 (74.58%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPR---VSGLGNALGGGSSAGKR 408
            ++EKLYR      DGL AL+I+PTREL+LQIF+VLR  GK H  SA L+TGGKKEFREEQA + R+NI+VATPGRLLQHLE+TPGFD S LQVLVLDEADRILD+GF  QLN+IL YLPP   RQT+LFSATQTKSVKDLARLSL K N EYV V       ATP +LVQNY+V  L  KMD L  FIK+H+K K++VF SSC+QVR+      ALQPG P++ALHGK K ARRT IY +F+R+P AVL ATDIAARGLDFP+ DWV+QVDAPED   YIHRVGRTARY  GGR+LL L+PSEE G++  L+  ++PI R+T+NP K     SV +K AA+VAS+P+ KRLA+K+F SY+R+V LMP K  F +S L +E +A +LGL+  P    +  L    GG    G+R
Sbjct:   86 LLEKLYREGWALSDGLGALIITPTRELALQIFEVLRTVGKGHMFSAALLTGGKKEFREEQARVPRMNIIVATPGRLLQHLEETPGFDASQLQVLVLDEADRILDMGFSRQLNAILAYLPPGAGRQTLLFSATQTKSVKDLARLSLDK-NSEYVGVHDTAAH-ATPDRLVQNYLVAALADKMDTLWAFIKSHMKHKLVVFFSSCSQVRYVHACFRALQPGVPLLALHGKIKQARRTHIYFEFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDTAMYIHRVGRTARYRSGGRSLLFLLPSEEGGMLRRLEAAHVPISRVTVNPSKTT---SVRQKTAAVVASNPECKRLAQKAFVSYLRSVALMPLKDVFDISALDVEAFADALGLSKCPSTKFLKALKEGRGGRRKGGRR 493          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A662Y817_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y817_9STRA)

HSP 1 Score: 482 bits (1240), Expect = 4.990e-156
Identity = 273/467 (58.46%), Postives = 329/467 (70.45%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERE 465
            ++EKL+R R    DGL ALVISPTREL+LQIF+VLR  GK H  SAGL+ GGK  FREEQ  LVR+N+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILDLGF+ QL SILE+LPP+  RQT+LFSATQTKSVKDLA LSL++   EYVAV       ATP  L Q+YVV  L++K+DVLL F+K H+K K IVFLS+C QVRF   + C LQPG P+ ALHGK K  +R ++Y +FL KP AVL ATD+AARGLDFP VDWV+Q+D PEDA  YIHRVGRTARYNK G+ALL LVPSE +G+   L+   +PI+   +NP K     S  +K A++VA D D K LA+K+F SYVR+VHL P++  F+ +ELPL+ +A SLGL   PR+  L                        M  E E   N+  REE R +KNVNR LQ+LKE+IK EKQRKRL R+
Sbjct:  119 VLEKLFRLRWGVEDGLGALVISPTRELALQIFEVLRSVGKAHAFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFKTQLASILEHLPPAGARQTLLFSATQTKSVKDLAALSLREP--EYVAVHEHSAN-ATPKGLSQSYVVTPLERKLDVLLAFVKAHLKQKTIVFLSTCRQVRFVHSVFCKLQPGVPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDVAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALLCLVPSEVDGMTKRLEDAKVPIRETKLNPAKT---ASCRQKVASVVAGDKDIKALAQKAFMSYVRSVHLQPHRDVFQAAELPLDAFAESLGLPGAPRMPFLSK----------------------MQAESEQS-NEAMREELRGKKNVNRKLQQLKEKIKTEKQRKRLARQ 555          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: M4B426_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B426_HYAAE)

HSP 1 Score: 483 bits (1244), Expect = 6.490e-156
Identity = 300/579 (51.81%), Postives = 380/579 (65.63%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKK---LRITSDGIDASGESKKKIFDEDGS 574
            ++EKL+R R +  DGL ALVISPTREL+LQIF+VLR+ GK H  SAGL+ GGK  FREEQ  LVR+N+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILDLGF++QL +ILE+LPP+  RQTMLFSATQTKSVKDLA LSL++   EYVAV       ATP  L Q+YVV  L++K+DVLL FIK+H+K K IVFLS+C QVR+   + C LQPG P+ ALHGK K  +R ++Y +FL KP AVL ATDIAARGLDFP VDWV+Q+D PED   YIHRVGRTARYNK G+AL+ LVPSE +G++  L+   +PI    +NP K     S  +K A++VA D D K LA+K+F SYVR+V+L P+++ F  + LPL+ +A SLGL   PR+  L                        M  E E   N+  R+E R +KNVNR LQ+LKE+IKAEK RKRL R   Q  TM    D K++E+   +KV        +  +  + D  +A+   ++V K V        N   + E  D   L R++ KK   LR+ S+ I+ S    K +FDEDG+
Sbjct:  175 VLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHTFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTAILEHLPPAGARQTMLFSATQTKSVKDLAALSLREP--EYVAVHEHSTN-ATPKGLTQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRYVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDTANYIHRVGRTARYNKQGKALMCLVPSEVDGMLKRLEAAKVPISETKLNPAKTT---SCRQKVASVVAGDKDIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSK----------------------MKAEHEKGGNEALRDELRGKKNVNRKLQQLKEKIKAEKARKRLAR---QLATM----DPKEQEEAI-NKV-------EMNQEDNELDEVEAEEDSLMVVKRVH-------NWADDDEPLDLEALDRRKQKKQKRLRVDSEVINTS----KIVFDEDGN 698          
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A4D9CS04_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS04_9STRA)

HSP 1 Score: 478 bits (1230), Expect = 6.230e-155
Identity = 266/458 (58.08%), Postives = 327/458 (71.40%), Query Frame = 0
Query:    1 MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAE 456
            ++EKLYR      DGL AL+I+PTREL+LQIF+VLR  GK H  SA L+TGGKKEFREEQ  + R+NI+VATPGRLLQHLE+TPGFD S LQVLVLDEADRILD+GF  QLN+IL YLPP   RQT+LFSATQTKSVKDLARLSL K N EYV V       ATP +LVQNY+V  L  KMD L  FIK+H+K K++VF SSC+QVR+      ALQPG P++ALHGK K ARRT IY +F+R+P AVL ATDIAARGLDFP+ DWV+QVDAPED   YIHRVGRTARY  GGR+LL L+PSEE G++  L+  ++PI R+T+NP K     SV +K AA+VAS+P+ KRLA+K+F SY+R+V LMP K  F +S L +E +A +LGL+  P    L           K +++G+   +               RE  R +KN +R+L+RLKE+IK E
Sbjct:   36 LLEKLYREGWALSDGLGALIITPTRELALQIFEVLRIVGKGHMFSAALLTGGKKEFREEQVRVPRMNIIVATPGRLLQHLEETPGFDASQLQVLVLDEADRILDMGFSRQLNAILAYLPPGAGRQTLLFSATQTKSVKDLARLSLDK-NSEYVGVHDTAAH-ATPDRLVQNYLVAALADKMDTLWAFIKSHMKHKLVVFFSSCSQVRYVHACFRALQPGVPLLALHGKIKQARRTHIYFEFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDTAMYIHRVGRTARYRSGGRSLLFLLPSEEGGMLRRLEAAHVPITRVTVNPSKTT---SVRQKTAAVVASNPECKRLAQKAFVSYLRSVALMPLKDVFDISALDVEAFADALGLSKCPSTKFL-----------KALKEGEGGAE-------------EGREAVREKKNRSRALERLKEKIKME 464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH86_ECTSI3.680e-28269.45DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CCM6_9STRA8.270e-18155.50DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
K3WGR9_GLOUD3.090e-16346.83Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6U3TUF8_9STRA2.240e-15945.98Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1C504_PYTOL6.630e-15957.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2QKL7_PHYPN7.790e-15858.67Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]
W7TN44_9STRA1.380e-15761.74Atp-dependent rna helicase dbp4 n=1 Tax=Nannochlor... [more]
A0A662Y817_9STRA4.990e-15658.46Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
M4B426_HYAAE6.490e-15651.81Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A4D9CS04_9STRA6.230e-15558.08Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 432..466
NoneNo IPR availableGENE3D3.40.50.300coord: 162..390
e-value: 2.1E-43
score: 150.6
NoneNo IPR availableGENE3D3.40.50.300coord: 1..153
e-value: 2.2E-46
score: 159.8
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 2..385
NoneNo IPR availablePANTHERPTHR24031:SF614ATP-DEPENDENT RNA HELICASE DDX10-RELATEDcoord: 2..385
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..169
e-value: 2.4E-17
score: 73.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..149
score: 24.781
IPR025313Domain of unknown function DUF4217SMARTSM01178DUF4217_3coord: 331..394
e-value: 1.7E-16
score: 70.8
IPR025313Domain of unknown function DUF4217PFAMPF13959DUF4217coord: 335..392
e-value: 1.7E-14
score: 53.8
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 202..288
e-value: 4.4E-21
score: 86.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 178..288
e-value: 3.6E-21
score: 75.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 165..327
score: 17.032
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 14..138
e-value: 8.8E-28
score: 97.3
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 95..103
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6177contigH-elongata_contig6177:1384..8998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6177.13736.1mRNA_H-elongata_contig6177.13736.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6177 775..9090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6177.13736.1 ID=prot_H-elongata_contig6177.13736.1|Name=mRNA_H-elongata_contig6177.13736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=769bp
MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLIT
GGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEAD
RILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEY
VAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSS
CAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLAT
DIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPS
EEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLA
EKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALG
GGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLK
EQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGG
DVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKK
LRITSDGIDASGESKKKIFDEDGSLVDEDGSAVDEDAVSALESFAKGKET
ASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREK
HLTRRMKGKDEKEDASESLTLALSHSDMNNGTEGSSGSSEEGGDIEDSGA
SKGLSWNESDDDDDDEPIRYNSGGSICLEIDGQMGKRQTAGRSRGKSLRE
LQNQEDAVLAILASRTER*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR025313DUF4217
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR027417P-loop_NTPase