mRNA_H-elongata_contig6177.13736.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: D8LH86_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH86_ECTSI) HSP 1 Score: 862 bits (2227), Expect = 3.270e-300 Identity = 487/688 (70.78%), Postives = 540/688 (78.49%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNAL----GGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKKLRITSDGIDASGESKKKIFDEDGSLVXXXXXXXXXXXVSALESFAKGKETASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREKHLTR 2054
VAAIPHALAGRDVLGAAKTGSGKTLAFLVP+VEKLYRSR+TFGDGL+ALVISPTRELSLQIF+VLR+FGKHHQLSAGLITGGKKEFREEQAS++++NILVATPGRLLQHLEQTPGFDPS LQVLVLDEADRILD+GFR+QLNSILEYLPPSRQTMLFSATQTKS+KDLARLSL+KGNVEYVAVRAGKDECATPAKLVQNYVVC+LDKK+DVLLGFIKTH+KSKMIVF +SCAQVRFAFELLCALQPG PVMALHGKCKHARRTQIYLDF+R+PGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYN GGRALL+++PSEEEGV+AGLKP NIPIKRLTINP+KVRMAGSVGKKA+ALVASDPD KRLAEKSFTSYVRAV LMPNKQAFRLSELPLE+YAFSLGLA PRV GL AL GGS K+ G ARA+KNVNRSLQRLKEQIKA+K RKRLER+ K E ++ + K V DGGLVLV+ +G +E ED L RKR KK+RITSDG+ A+G + K++FDEDG+ V +S L++FAK + AS A A LP A +A YV R+KARL AV +D+AR+R+ HL R
Sbjct: 76 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQASVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSIKDLARLSLRKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMMLPSEEEGVLAGLKPNNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAVQLMPNKQAFRLSELPLEEYAFSLGLAAAPRVPGLEKALVNIPSGGSGEDKKGGPGXXXXXXXXXXXXXX---------ARAKKNVNRSLQRLKEQIKADKLRKRLERKGKLE---EASKASLEPRKTKARAVKXXXXXXXXXXXXXXXXXXXXDGGLVLVQTERSEGVGSGAELE---EDGGAEELQRKRKKKMRITSDGVAAAGVATKRVFDEDGAAVDV---------ISPLQAFAKETGVPTGSASSASDAASLPAASEA---YVKRIKARLEAVDGEDKARDREXXXXXHLKR 736
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A836CCM6_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM6_9STRA) HSP 1 Score: 596 bits (1536), Expect = 2.750e-197 Identity = 350/611 (57.28%), Postives = 420/611 (68.74%), Query Frame = 3
Query: 6 AAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSE-LPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDD--DFGPLPRKRVK--KLRITSDGID-ASGESKKKIFDEDGSLV 1820
A+IPHALAGRDVLGAA TGSGKTLAFLVP++EKL+R R TFGDGL ALV+SPTREL+LQIF+VLR G H LSAGLI GGK++F EEQA + NIL+ATPGRLLQHLEQTPGFD S LQVLVLDEADR+LD+GFREQLNS+L YLP RQTMLFSATQT+SVKDLARLSL + VEY++ A+LVQNYVVC+L +K+DVL F+KTHIKSK IVF SSCAQVRF ELLCALQPG P++ALHGK K +RTQIY D++RK AVL ATD+AARGLDFP+VDWVIQ DAPEDA YIHR GRTARY GGRALL+L+PSEE+G++A L + IPI RLT+NPDK+R AGSV +A++ VA+D D +RLAEK+F SYVR+V LMP+++ F E L L +A SLGL PR+ G A V+ + REE RA+KNVNRSLQRLKEQI+AE+ KR +RE + A K K + GG D S + D G +LV VK + G +G D+ D +K+ K K RI +GI A+ + K +F+E G V
Sbjct: 74 ASIPHALAGRDVLGAASTGSGKTLAFLVPLLEKLHRMRWTFGDGLGALVVSPTRELALQIFEVLRVVGGKHLLSAGLIVGGKRDFTEEQAMVSATNILIATPGRLLQHLEQTPGFDASQLQVLVLDEADRLLDMGFREQLNSVLTYLPLQRQTMLFSATQTRSVKDLARLSLNRDTVEYIS-----------AQLVQNYVVCELRQKLDVLYSFLKTHIKSKTIVFFSSCAQVRFVHELLCALQPGVPLLALHGKLKQQKRTQIYFDYVRKASAVLFATDVAARGLDFPAVDWVIQADAPEDAASYIHRAGRTARYKSGGRALLLLLPSEEKGMVAALSKQKIPITRLTVNPDKMRAAGSVTARASSAVAADADKRRLAEKAFHSYVRSVQLMPDRRTFGGGEGLDLAGFATSLGLPAPPRLKGAVIAAA--------------------------VEGEEGREEVRAKKNVNRSLQRLKEQIRAERALKRAQREG-----LSAAAPEAPKAKKTSASSAVLNGGSKSALDDGSSQSDDGSGDDLLV---VKSREVPGDASDGSGADEAADRARSRKKKAKEPKQRINQEGIAVAAAAATKVVFNEAGEGV 639
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: K3WGR9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGR9_GLOUD) HSP 1 Score: 549 bits (1415), Expect = 2.550e-179 Identity = 335/690 (48.55%), Postives = 434/690 (62.90%), Query Frame = 3
Query: 9 AIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKKLRITSDGIDASGESKKKIFDEDGSLVXXXXXXXXXXXVSALESFAKGKETASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREKHLTRRMKGKDEK 2078
AIPHALAGRD+L AAKTGSGKTLAFL+P++EKLYRSR DGL ALVISPTREL+LQIF+VLR GK H SAGL+ GGK F+EEQ L+R+NIL+ TPGRLLQH+EQT FDPS LQ+LVLDEADRILD+GF++QL SI+ YLP RQTMLFSATQTKSVKDLA+LSL + EY+AV K ATP+ L Q++VVC L++K+DVLL FIK+H+K K IVFLS+C QVRF ++ C LQPG P++ALHGK K +R +IY +FL KP AVL ATDIAARGLDFP VDWV+Q+D PED YIHRVGRTARYNK G+ALL L+PSE +G+ + IPIK + +NP K + S +K ++VA+D D K L +K+F SYVR+V+L PN++ F S+LPL+++A S GL PR+ L M + + V REE R +KNVNR LQ LK++IKAEK+RKRLE++ L+ KDK+ Q++V ++ G D SD+D GL++V++ D +K+ KK+R+ D + +FD++G+ + A E ++ +AS+A ARL +DR E++RVR KH +RMK K E+
Sbjct: 77 AIPHALAGRDILAAAKTGSGKTLAFLIPILEKLYRSRWDVEDGLGALVISPTRELALQIFEVLRSLGKAHSFSAGLVIGGKN-FKEEQYRLIRMNILICTPGRLLQHMEQTANFDPSNLQILVLDEADRILDMGFQQQLTSIVAYLPTERQTMLFSATQTKSVKDLAKLSLNEP--EYIAVHE-KSAQATPSGLAQSFVVCGLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHQVFCKLQPGVPLLALHGKYKQGKRVEIYYEFLNKPAAVLFATDIAARGLDFPQVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALLTLLPSEVDGMTKAFEDAKIPIKEIKVNPAKTQ---SSRQKVTSVVAADKDIKALGQKAFMSYVRSVYLQPNREVFDASKLPLDEFALSYGLPGAPRMPFLAK----------------------MKEDQQEV----MREELRGKKNVNRKLQMLKDKIKAEKERKRLEKQ--------LSSLKKDKK---QAEVTVEKDGSE--------DESDSDDGLMVVKRRHNWDKEGXXXXXXXXXXDLDASRKKKKAKKIRV-----DNEVSYNRVVFDDEGNSMKVLEKMAAQRLDDASEFADVEAKSKQFQASVA---------------------ARLREKDAEDRRLEKERVRAKHHKKRMKEKGER 688
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A6U3TUF8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TUF8_9STRA) HSP 1 Score: 542 bits (1397), Expect = 6.980e-176 Identity = 335/701 (47.79%), Postives = 436/701 (62.20%), Query Frame = 3
Query: 6 AAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSR------QTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDF---GPLPRKRVKKLRITSDGIDASGESKKKIFDEDGSLVXXXXXXXXXXXVSALESFAKGKETASTKASIAKCAKGLPPALDARNAYVDRVKARLNAVADQDRARERQRVREKHLTRRMKGKDEKE 2081
A IPHALAGRD+LGAA+TGSGKTLAFLVP++E LYRSR T DG A+V+SPTREL++Q F+VLR G HH LSAGL+ GGKKEF EQ + R NIL+ATPGRLLQHLEQTP F+ ++VLVLDEADRILD+GFR Q+ +L+YLP R QTMLFSATQTK V DLA LSL K EYV V K+ ATP L Q+Y+V L+ K+D + F+K+H++ K I+F SSC+QVR +EL C LQPG P+MA+HGK RRTQIY DFL+KP AVL ATD+A+RGLDFP+VDWV+Q DAPED + YIHRVGRTARYN GGR+LL+L+PSE+ LK IPI +L+INP K + S KA+++VAS P LA+K+F SYVR VHLMPNK+ F +SEL L++YA SLGLA+ P++ L K V+ REE R +KNVN LQ+LKEQIKAE+ ++RLER K+ A D KEK G+ GG ++V+KN G+ E E+++ GP + K++RI ++GE+K+ FD+DG+ + + + + + TK + A+ A Y+ +V+ RL A + D+A E++R+R KH +R++ K E E
Sbjct: 103 ACIPHALAGRDILGAARTGSGKTLAFLVPLLESLYRSRYTPMDGPGAIVLSPTRELAVQTFEVLRSIGSHHDLSAGLLVGGKKEFGLEQMRVGRTNILIATPGRLLQHLEQTPNFNVDNVKVLVLDEADRILDMGFRNQMVRLLDYLPAGRKKGGDRQTMLFSATQTKRVADLAALSLDKP--EYVGVH-DKESSATPTSLRQSYIVVPLEHKLDAIFSFLKSHLQRKTIIFFSSCSQVRHTWELFCRLQPGVPLMAIHGKVSQERRTQIYFDFLKKPSAVLFATDVASRGLDFPNVDWVVQADAPEDMDMYIHRVGRTARYNAGGRSLLLLLPSEQVEFERLLKKSKIPIDKLSINPTKTVLVTS---KASSIVASSPQINALAKKAFQSYVRGVHLMPNKEMFVVSELNLDEYATSLGLASTPKMKFL-----------KEVKT---------------------REELRTKKNVNHKLQKLKEQIKAERLQRRLERLGKK------AEDEPKKEK------------GNXXXXXXXXXXXXTHGGFLVVKKNH-------GDTETTLEEEEIHLHGPSKSQLPKRIRIEGS---SAGENKRITFDDDGNEERTTIDELRKR--ADITNGSSDSDENVTKTTTAEENNAQDDLAGANEEYLRQVRKRLEATKEIDKAEEKERIRAKHKKKRIQDKGEME 735
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: W7TN44_9STRA (Atp-dependent rna helicase dbp4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN44_9STRA) HSP 1 Score: 528 bits (1360), Expect = 5.050e-175 Identity = 282/443 (63.66%), Postives = 338/443 (76.30%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPR---VSGLGNALGGGSSAGKR 1316
+AA+PHALAGRDVLGAAKTGSGKTLAF+VP++EKLYR DGL AL+I+PTREL+LQIF+VLR GK H SA L+TGGKKEFREEQA + R+NI+VATPGRLLQHLE+TPGFD S LQVLVLDEADRILD+GF QLN+IL YLPP RQT+LFSATQTKSVKDLARLSL K N EYV V ATP +LVQNY+V L KMD L FIK+H+K K++VF SSC+QVR+ ALQPG P++ALHGK K ARRT IY +F+R+P AVL ATDIAARGLDFP+ DWV+QVDAPED YIHRVGRTARY GGR+LL L+PSEE G++ L+ ++PI R+T+NP K SV +K AA+VAS+P+ KRLA+K+F SY+R+V LMP K F +S L +E +A +LGL+ P + L GG G+R
Sbjct: 56 LAAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWALSDGLGALIITPTRELALQIFEVLRTVGKGHMFSAALLTGGKKEFREEQARVPRMNIIVATPGRLLQHLEETPGFDASQLQVLVLDEADRILDMGFSRQLNAILAYLPPGAGRQTLLFSATQTKSVKDLARLSLDK-NSEYVGVHDTAAH-ATPDRLVQNYLVAALADKMDTLWAFIKSHMKHKLVVFFSSCSQVRYVHACFRALQPGVPLLALHGKIKQARRTHIYFEFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDTAMYIHRVGRTARYRSGGRSLLFLLPSEEGGMLRRLEAAHVPISRVTVNPSKTT---SVRQKTAAVVASNPECKRLAQKAFVSYLRSVALMPLKDVFDISALDVEAFADALGLSKCPSTKFLKALKEGRGGRRKGGRR 493
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A8K1C504_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C504_PYTOL) HSP 1 Score: 537 bits (1384), Expect = 1.050e-174 Identity = 290/495 (58.59%), Postives = 365/495 (73.74%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERE 1487
+ IPHALAGRD+L AAKTGSGKTLAFL+PM+EKLYR R DGL AL+ISPTREL+LQIF+VLR GK H SAGL+ GGK F+EEQ L+R+NILV TPGRLLQH+EQTP FD + LQ+LVLDEADRILD+GFREQL SI+ YLP RQTMLFSATQTKSVKDLA+LSLK+ EY+AV K ATP+ L Q+Y+VC L++K+DVL F+++H+K K+IVFL++C QVR+ + L C LQPG P+ +LHGK K +R ++Y +FL KP VL ATDIAARGLDFP+VDWV+Q+D PED YIHRVGRTARYNK G+AL+ L+PSE E + L IPIK + +NP K + S +K A++VA+D D K LA+K+F SYVR+V LMP K F S+LPLE+YA SLGL PR+ L ++++ DV D+++ R+E R++KNVNR L +LKE+IKAEK +K+L+RE
Sbjct: 77 IGTIPHALAGRDILAAAKTGSGKTLAFLIPMLEKLYRLRWDVEDGLGALIISPTRELALQIFEVLRSVGKTHTFSAGLVIGGKN-FKEEQYRLIRMNILVCTPGRLLQHMEQTPDFDAANLQLLVLDEADRILDMGFREQLTSIVSYLPRERQTMLFSATQTKSVKDLAKLSLKEP--EYIAVHE-KSTQATPSGLQQSYIVCPLEQKLDVLFSFLRSHLKQKIIVFLATCRQVRYIYSLFCKLQPGIPLCSLHGKYKQGKRVEVYYEFLNKPACVLFATDIAARGLDFPNVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALMCLLPSESEAMKKHLDDSKIPIKEIKLNPAKTQ---SCRQKVASVVAADKDIKALAQKAFMSYVRSVFLMPLKDVFDASQLPLEEYAVSLGLPGAPRMPFL-----------EKLKTQDV-------------DHEKLRDELRSKKNVNRKLAQLKEKIKAEKAKKKLDRE 540
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: W2QKL7_PHYPN (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2QKL7_PHYPN) HSP 1 Score: 535 bits (1379), Expect = 6.220e-174 Identity = 300/497 (60.36%), Postives = 363/497 (73.04%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERE 1487
V A+PHALAGRDVL AAKTGSGKTLAFL+P++EKL+R R + DGL ALVISPTREL+LQIF+VLR+ GK H SAGL+ GGK FREEQ LVR+N+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILDLGF++QL SILE+LPP+ RQTMLFSATQTKSVKDLA LSL++ EYVAV ATP L Q+YVV L++K+DVLL FIK+H+K K IVFLS+C QVRF + C LQPG P+ ALHGK K +R ++Y +FL KP AVL ATDIAARGLDFP VDWV+Q+D PEDA YIHRVGRTARYNK G+AL+ LVPSE +G+M L+ +PI+ +NP K S +K A++VA D + K LA+K+F SYVR+V+L P+++ F + LPL+ +A SLGL PR+ L M E EN N+ REE R +KNVNR LQ+LKE+IKAEK+RKRL R+
Sbjct: 91 VGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHAFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLREP--EYVAVHEHSAN-ATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTT---SCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSK----------------------MKAEHENGGNEALREELRGKKNVNRKLQQLKEKIKAEKERKRLARQ 558
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A4D9CS04_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS04_9STRA) HSP 1 Score: 530 bits (1366), Expect = 3.070e-172 Identity = 293/488 (60.04%), Postives = 357/488 (73.16%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAE 1460
+AA+PHALAGRDVLGAAKTGSGKTLAF+VP++EKLYR DGL AL+I+PTREL+LQIF+VLR GK H SA L+TGGKKEFREEQ + R+NI+VATPGRLLQHLE+TPGFD S LQVLVLDEADRILD+GF QLN+IL YLPP RQT+LFSATQTKSVKDLARLSL K N EYV V ATP +LVQNY+V L KMD L FIK+H+K K++VF SSC+QVR+ ALQPG P++ALHGK K ARRT IY +F+R+P AVL ATDIAARGLDFP+ DWV+QVDAPED YIHRVGRTARY GGR+LL L+PSEE G++ L+ ++PI R+T+NP K SV +K AA+VAS+P+ KRLA+K+F SY+R+V LMP K F +S L +E +A +LGL+ P L K +++G+ + RE R +KN +R+L+RLKE+IK E
Sbjct: 6 LAAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWALSDGLGALIITPTRELALQIFEVLRIVGKGHMFSAALLTGGKKEFREEQVRVPRMNIIVATPGRLLQHLEETPGFDASQLQVLVLDEADRILDMGFSRQLNAILAYLPPGAGRQTLLFSATQTKSVKDLARLSLDK-NSEYVGVHDTAAH-ATPDRLVQNYLVAALADKMDTLWAFIKSHMKHKLVVFFSSCSQVRYVHACFRALQPGVPLLALHGKIKQARRTHIYFEFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDTAMYIHRVGRTARYRSGGRSLLFLLPSEEGGMLRRLEAAHVPITRVTVNPSKTT---SVRQKTAAVVASNPECKRLAQKAFVSYLRSVALMPLKDVFDISALDVEAFADALGLSKCPSTKFL-----------KALKEGEGGAE-------------EGREAVREKKNRSRALERLKEKIKME 464
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: A0A662Y817_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y817_9STRA) HSP 1 Score: 531 bits (1368), Expect = 4.010e-172 Identity = 299/497 (60.16%), Postives = 357/497 (71.83%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERE 1487
V A+PHALAGRDVL AAKTGSGKTLAFL+P++EKL+R R DGL ALVISPTREL+LQIF+VLR GK H SAGL+ GGK FREEQ LVR+N+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILDLGF+ QL SILE+LPP+ RQT+LFSATQTKSVKDLA LSL++ EYVAV ATP L Q+YVV L++K+DVLL F+K H+K K IVFLS+C QVRF + C LQPG P+ ALHGK K +R ++Y +FL KP AVL ATD+AARGLDFP VDWV+Q+D PEDA YIHRVGRTARYNK G+ALL LVPSE +G+ L+ +PI+ +NP K S +K A++VA D D K LA+K+F SYVR+VHL P++ F+ +ELPL+ +A SLGL PR+ L M E E N+ REE R +KNVNR LQ+LKE+IK EKQRKRL R+
Sbjct: 89 VGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWGVEDGLGALVISPTRELALQIFEVLRSVGKAHAFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFKTQLASILEHLPPAGARQTLLFSATQTKSVKDLAALSLREP--EYVAVHEHSAN-ATPKGLSQSYVVTPLERKLDVLLAFVKAHLKQKTIVFLSTCRQVRFVHSVFCKLQPGVPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDVAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALLCLVPSEVDGMTKRLEDAKVPIRETKLNPAKT---ASCRQKVASVVAGDKDIKALAQKAFMSYVRSVHLQPHRDVFQAAELPLDAFAESLGLPGAPRMPFLSK----------------------MQAESEQS-NEAMREELRGKKNVNRKLQQLKEKIKTEKQRKRLARQ 555
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Match: M4B426_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B426_HYAAE) HSP 1 Score: 533 bits (1372), Expect = 5.660e-172 Identity = 326/609 (53.53%), Postives = 408/609 (67.00%), Query Frame = 3
Query: 3 VAAIPHALAGRDVLGAAKTGSGKTLAFLVPMVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITGGKKEFREEQASLVRVNILVATPGRLLQHLEQTPGFDPSTLQVLVLDEADRILDLGFREQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCKLDKKMDVLLGFIKTHIKSKMIVFLSSCAQVRFAFELLCALQPGTPVMALHGKCKHARRTQIYLDFLRKPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNKGGRALLILVPSEEEGVMAGLKPKNIPIKRLTINPDKVRMAGSVGKKAAALVASDPDNKRLAEKSFTSYVRAVHLMPNKQAFRLSELPLEDYAFSLGLATMPRVSGLGNALGGGSSAGKRVRDGDVSGDGHMFPEDENVDNQRQREEARARKNVNRSLQRLKEQIKAEKQRKRLERESKQNGTMELARDVKDKEKPPQSKVGTDEGGGSIGGDVQDSDNSDADGGLVLVRKNVKGSGITGGNVEGESEDDDFGPLPRKRVKK---LRITSDGIDASGESKKKIFDEDGS 1814
V A+PHALAGRDVL AAKTGSGKTLAFL+P++EKL+R R + DGL ALVISPTREL+LQIF+VLR+ GK H SAGL+ GGK FREEQ LVR+N+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILDLGF++QL +ILE+LPP+ RQTMLFSATQTKSVKDLA LSL++ EYVAV ATP L Q+YVV L++K+DVLL FIK+H+K K IVFLS+C QVR+ + C LQPG P+ ALHGK K +R ++Y +FL KP AVL ATDIAARGLDFP VDWV+Q+D PED YIHRVGRTARYNK G+AL+ LVPSE +G++ L+ +PI +NP K S +K A++VA D D K LA+K+F SYVR+V+L P+++ F + LPL+ +A SLGL PR+ L M E E N+ R+E R +KNVNR LQ+LKE+IKAEK RKRL R Q TM D K++E+ +KV + + + D +A+ ++V K V N + E D L R++ KK LR+ S+ I+ S K +FDEDG+
Sbjct: 145 VGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHTFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTAILEHLPPAGARQTMLFSATQTKSVKDLAALSLREP--EYVAVHEHSTN-ATPKGLTQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRYVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDTANYIHRVGRTARYNKQGKALMCLVPSEVDGMLKRLEAAKVPISETKLNPAKTT---SCRQKVASVVAGDKDIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSK----------------------MKAEHEKGGNEALRDELRGKKNVNRKLQQLKEKIKAEKARKRLAR---QLATM----DPKEQEEAI-NKV-------EMNQEDNELDEVEAEEDSLMVVKRVH-------NWADDDEPLDLEALDRRKQKKQKRLRVDSEVINTS----KIVFDEDGN 698 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6177.13736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6177.13736.1 >prot_H-elongata_contig6177.13736.1 ID=prot_H-elongata_contig6177.13736.1|Name=mRNA_H-elongata_contig6177.13736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=769bp MVEKLYRSRVTFGDGLSALVISPTRELSLQIFQVLRDFGKHHQLSAGLITback to top mRNA from alignment at H-elongata_contig6177:775..9090- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6177.13736.1 ID=mRNA_H-elongata_contig6177.13736.1|Name=mRNA_H-elongata_contig6177.13736.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8316bp|location=Sequence derived from alignment at H-elongata_contig6177:775..9090- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6177:775..9090- >mRNA_H-elongata_contig6177.13736.1 ID=mRNA_H-elongata_contig6177.13736.1|Name=mRNA_H-elongata_contig6177.13736.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4614bp|location=Sequence derived from alignment at H-elongata_contig6177:775..9090- (Himanthalia elongata Himel1 dioecious)back to top |