prot_H-elongata_contig61751.13734.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig61751.13734.1
Unique Name	prot_H-elongata_contig61751.13734.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	69

Homology

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BLAST of mRNA_H-elongata_contig61751.13734.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 7.660e-10
Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0

Query:    2 VSFDWEVDLTRPETKVLDGPDPVTTDGSAEFLFACELDGESLEYNRECLYEYQI 55
            V  DWEVDLTRPET+V+  P PV T G A F FAC L GE  E +  C Y+YQ+
Sbjct: 1021 VKVDWEVDLTRPETRVVSRPSPVMTTGVAAFQFACSLAGE--EPSHGCFYQYQM 1072

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BLAST of mRNA_H-elongata_contig61751.13734.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 7.660e-10
Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0

Query:    5 DWEVDLTRPETKVLDGPDPVTTDGSAEFLFACELDGESLEYNRECLYEYQISTART 60
            DWEVDLTRPET+V+  P PV T G A F FAC L GE  E +  C Y+YQ+  A +
Sbjct: 1218 DWEVDLTRPETRVVSRPSPVMTTGVAAFQFACSLAGE--EPSHGCFYQYQMMVANS 1271

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig61751.13734.1 vs. uniprot

BLAST of mRNA_H-elongata_contig61751.13734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K857_9PHAE	7.660e-10	57.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBK9_ECTSI	7.660e-10	55.36	OmpA domain-containing protein n=1 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig61751	contig	H-elongata_contig61751:424..630 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig61751.13734.1	mRNA_H-elongata_contig61751.13734.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig61751 424..630 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig61751.13734.1 ID=prot_H-elongata_contig61751.13734.1|Name=mRNA_H-elongata_contig61751.13734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
MVSFDWEVDLTRPETKVLDGPDPVTTDGSAEFLFACELDGESLEYNRECL
YEYQISTARTVSEAETEVD