prot_H-elongata_contig61704.13724.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig61704.13724.1
Unique Name	prot_H-elongata_contig61704.13724.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	239

Homology

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BLAST of mRNA_H-elongata_contig61704.13724.1 vs. uniprot
Match: D8LT42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT42_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 2.010e-37
Identity = 89/158 (56.33%), Postives = 106/158 (67.09%), Query Frame = 0

Query:    3 PSLRRAVERLLEDKARVEEALGAEGRRAEEERCRSRLWSNQVQELSLQAVKSAERCRELKAETLELRTELERTNDMLEQAKTLGAEAMARKEELRLAWMEAGLLKEELGAVRADCGRLVQLVSSTKEYSRFRRLWDDSGGLTIIENAIRGGPDFSIQS 160
            P L   V RL E     E ALG EG+RAEEE+ RS  W  +V +LSLQAV+SAERCR L AE  +L+ E+ER  + LE+AK   + A A    LRL  +E  LL EELGAVRADCGRLVQLVSSTKEY+ FRR+WDDSGGLT   N     P F+ ++
Sbjct:  133 PVLAAEVSRLREVTGNAESALGKEGKRAEEEKRRSEAWRARVDKLSLQAVQSAERCRTLSAENHQLKEEIERVREHLEEAKRRCSAAGATSNALRLKTIETELLSEELGAVRADCGRLVQLVSSTKEYAEFRRVWDDSGGLTRPYNGGAKTPFFAAKN 290

[Close]

BLAST of mRNA_H-elongata_contig61704.13724.1 vs. uniprot
Match: A0A6H5KFY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY4_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 2.910e-35
Identity = 109/257 (42.41%), Postives = 137/257 (53.31%), Query Frame = 0

Query:    1 RIPSLRRAVERLLEDKARVEEALGAEGRRAEEERCRSRLWSNQVQELSLQA---------VKSAERCRELKAETLELRTELERTNDMLEQAKTLGAEAMARKEELRLAWMEAGLLKEELGAVRADCGRLVQLVSSTKEYSRFRRLWDDSGGLTIIENAIRGGPDFSIQSHRQAPTAAXXXXXXXSAGIAPAVKGVLCGVNKKKIGTNDQSMGATIGSAAAAAVA------------WDEAMRSEWSSPSEKIFSVAT 236
            R+P L   V RL E     E ALG EG+RAEEE+ RS  W  +V +LSLQA         V+SAE CR L AE  +L+ E++R  + LE+AK   + A A    LRL  +E  LL EELGAVRADC RLV+LVSSTKEY+ FRR+WDDSGGLT   N   GG   S  + +   + +       +A  +   +     V+  K       M  T       A A            W++AMRSEWSSPSEK+   AT
Sbjct:  104 RVPVLAAEVGRLREVTGNTESALGKEGKRAEEEQRRSEAWIARVDKLSLQARLGGRATGAVQSAEHCRTLSAENHQLKEEIKRVREHLEEAKRQCSAAGATSNALRLKTIEVELLSEELGAVRADCSRLVRLVSSTKEYAEFRRVWDDSGGLTRPYN---GGAKSSNFADKNGVSISHGVIIKATA--SQEEETTKSAVSFSKAAPFSGGMPHTXXXXXXPAAAERGTPITRSSDPWEQAMRSEWSSPSEKLIGAAT 355

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig61704.13724.1 vs. uniprot

BLAST of mRNA_H-elongata_contig61704.13724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LT42_ECTSI	2.010e-37	56.33	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KFY4_9PHAE	2.910e-35	42.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..22
None	No IPR available	COILS	Coil	Coil	coord: 44..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig61704	contig	H-elongata_contig61704:196..1907 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig61704.13724.1	mRNA_H-elongata_contig61704.13724.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig61704 196..1907 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig61704.13724.1 ID=prot_H-elongata_contig61704.13724.1|Name=mRNA_H-elongata_contig61704.13724.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=239bp
RIPSLRRAVERLLEDKARVEEALGAEGRRAEEERCRSRLWSNQVQELSLQ
AVKSAERCRELKAETLELRTELERTNDMLEQAKTLGAEAMARKEELRLAW
MEAGLLKEELGAVRADCGRLVQLVSSTKEYSRFRRLWDDSGGLTIIENAI
RGGPDFSIQSHRQAPTAAAADDDDDSAGIAPAVKGVLCGVNKKKIGTNDQ
SMGATIGSAAAAAVAWDEAMRSEWSSPSEKIFSVATLTA