prot_H-elongata_contig61683.13721.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61683.13721.1
Unique Nameprot_H-elongata_contig61683.13721.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length209
Homology
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BLAST of mRNA_H-elongata_contig61683.13721.1 vs. uniprot
Match: D7G5A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A1_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.650e-22
Identity = 67/151 (44.37%), Postives = 85/151 (56.29%), Query Frame = 0 
Query:    6 RAARAVFCSALILSQHVMVNANSWFMGHPS--RSSTLAVAAPGGRDRPVRDWKAISRNANKRTEESGQQAAKKVTGAVEVLEQAPPDSSTRDVEETGEAEAAPADILYLEKTAPGSLVVVLSKVAVFATVGIYGAKKAVAFTKAFFKARKE 154
            R  RA+FCSAL+LSQH +V+AN+W  G  S  RSSTLAV  PGGR+RP+RDWKAI R A ++ +                              ET  AEA     L +E+     + ++L+KV V AT G+YG KK VAF KAF KARK+
Sbjct:    8 RVPRALFCSALLLSQHAVVDANNWATGRASSSRSSTLAVMQPGGRNRPIRDWKAIKREAEEKRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETVSAEA-----LDMEEDTAEDIGIMLAKVVVIATAGVYGIKKVVAFAKAFTKARKD 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61683.13721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5A1_ECTSI2.650e-2244.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61683contigH-elongata_contig61683:719..3162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61683.13721.1mRNA_H-elongata_contig61683.13721.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61683 418..3564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61683.13721.1 ID=prot_H-elongata_contig61683.13721.1|Name=mRNA_H-elongata_contig61683.13721.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
MIKLNRAARAVFCSALILSQHVMVNANSWFMGHPSRSSTLAVAAPGGRDR
PVRDWKAISRNANKRTEESGQQAAKKVTGAVEVLEQAPPDSSTRDVEETG
EAEAAPADILYLEKTAPGSLVVVLSKVAVFATVGIYGAKKAVAFTKAFFK
ARKEAAAEASTAGMSTETGDEAEGQDEATERGGEEAEEALAVTDSDGDDN
DQESHPSR*
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