mRNA_H-elongata_contig61641.13716.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: D7FS31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS31_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.590e-64 Identity = 110/133 (82.71%), Postives = 116/133 (87.22%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHGGPSTQEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALPE-EKEAGAREK 396
SLLFAMFATLDAFDWLL KPLP+ DPPEVKLLQKHLRF VNQLR G IPREHSN IR+HL CGW GG STQEDV+ELFTFLVCLLRCPALPLSEALFHGG DAGDSRISTERAL+LALPE EKE R++
Sbjct: 704 SLLFAMFATLDAFDWLLFKPLPSTDPPEVKLLQKHLRFLVNQLREGATIPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKETEDRKR 836
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A6H5L1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X4_9PHAE) HSP 1 Score: 216 bits (550), Expect = 1.280e-62 Identity = 109/135 (80.74%), Postives = 116/135 (85.93%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPE--VKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHGGPSTQEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALPE-EKEAGAREK 396
SLLFAMFATLDAFDWLL KPLP+ DPPE VKLLQKHLRF VNQLR G +PREHSN IR+HL CGW GG STQEDV+ELFTFLVCLLRCPALPLSEALFHGG DAGDSRISTERAL+LALPE EKE R++
Sbjct: 663 SLLFAMFATLDAFDWLLFKPLPSTDPPEARVKLLQKHLRFLVNQLREGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKETEDRKR 797
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A836CLH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH8_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.170e-23 Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWH-----GGPS----TQEDVSELFTFLVCLLRCPALPLSEAL 294
SLLFAMFA AFDWLL+KPL DP + LLQ +LRF+V Q+RRG ++P +H+N IR L CGW GG S +Q+DVSEL+ FL+ L R P LP + L
Sbjct: 353 SLLFAMFACTSAFDWLLMKPLRRTDPASLHLLQMNLRFFVGQMRRGALVPGDHANVIRRCLVGCGWGTAAGVGGDSGALHSQQDVSELYGFLLSLFRAPTLPAVQLL 459
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: U9T6Q1_RHIID (USP domain-containing protein n=5 Tax=Rhizophagus TaxID=1129544 RepID=U9T6Q1_RHIID) HSP 1 Score: 97.1 bits (240), Expect = 4.800e-21 Identity = 55/126 (43.65%), Postives = 69/126 (54.76%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHG----GPSTQEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALP 366
S+LF MFA +FD LL + ++LQ HLR +VN+LR G I +R L +CGW G G TQED SE F FL CL P LPL LFHG DA D R+ TER + +++P
Sbjct: 87 SVLFTMFARTQSFDGLLFVQ---AEGVNARVLQTHLRLFVNRLRSGKFINSYMIKQLRECLISCGWIGEDNYGNPTQEDASEFFLFLSCLYELPYLPLGMHLFHGASADANDERVITERLIQVSIP 209
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A015LYV1_RHIIW (USP domain-containing protein n=8 Tax=Glomeraceae TaxID=36751 RepID=A0A015LYV1_RHIIW) HSP 1 Score: 97.1 bits (240), Expect = 5.670e-21 Identity = 55/126 (43.65%), Postives = 69/126 (54.76%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHG----GPSTQEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALP 366
S+LF MFA +FD LL + ++LQ HLR +VN+LR G I +R L +CGW G G TQED SE F FL CL P LPL LFHG DA D R+ TER + +++P
Sbjct: 120 SVLFTMFARTQSFDGLLFVQ---AEGVNARVLQTHLRLFVNRLRSGKFINSYMIKQLRECLISCGWIGEDNYGNPTQEDASEFFLFLSCLYELPYLPLGMHLFHGASADANDERVITERLIQVSIP 242
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A4V1IS80_9FUNG (USP domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1IS80_9FUNG) HSP 1 Score: 92.0 bits (227), Expect = 4.420e-19 Identity = 60/159 (37.74%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLK--PLPAKDPPEVKLLQ---------KHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHG----------------GPSTQEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALPEEKEAGAREK 396
+LL AMFA D LL + PLP DP L +LR +NQLR GT++ R + +R L + GW G +QED SELF FL + P LP+ E L+HG K D R+ TER + L++PEE EAG +EK
Sbjct: 185 ALLCAMFARETVHDVLLTREIPLPPGDPKATHLANLQTTYGIDMPNLRLVINQLRSGTLVSRHVMSVLREDLVSSGWTGRFQRTDIPPAPQYHQAASCSQEDSSELFLFLTDVFSAPFLPIEEVLYHGAKETHDDERVRTERLIQLSIPEESEAGKKEK 343
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A179FGH3_METCM (Ubiquitin C-terminal hydrolase family protein n=2 Tax=Metacordyceps chlamydosporia TaxID=280754 RepID=A0A179FGH3_METCM) HSP 1 Score: 92.0 bits (227), Expect = 4.450e-19 Identity = 57/127 (44.88%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHGGPST-QEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALPEEKE 378
SLLFAMFA LDAF+ +L P DP ++KL+ LR WVN LR G +I + + I+ L CGW Q+D SE F FL L+ P L L LFH GK D D ++ ER L LA+P + E
Sbjct: 167 SLLFAMFAKLDAFECMLKSTFPIDDP-KLKLVTL-LRIWVNLLRSGKLIRTDLTKLIQDTLSDCGWTDAKLLEQQDTSEAFAFLTETLQLPLLSLQVDLFHQGKGDKDDHKVVYERLLNLAVPPDPE 291
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: UPI001E8DE9BB (ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8DE9BB) HSP 1 Score: 92.0 bits (227), Expect = 4.460e-19 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLP---AKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGW-HGGPSTQEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALPEE 372
+LLF+MFA +DAF+ +L P AKD L K LR WVN LR G +I + + I++ L ACGW G Q+D SE F FL L+ P L L LFH GK D D ++ ER L LA+PE+
Sbjct: 150 TLLFSMFAKMDAFECMLKNDFPEDKAKDS-----LVKLLRMWVNMLRMGRLIRTDLTEEIQNSLAACGWPEAGLLEQQDTSEAFGFLTETLQLPLLSLQVDLFHHGKKDDADRKVVYERLLNLAVPED 272
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A0B2WIF8_METAS (Ubiquitin hydrolase family protein n=1 Tax=Metarhizium album (strain ARSEF 1941) TaxID=1081103 RepID=A0A0B2WIF8_METAS) HSP 1 Score: 91.3 bits (225), Expect = 8.270e-19 Identity = 55/123 (44.72%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHGGPST-QEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALP 366
SLLFAMFA LDAF+ +L PA D + L LR WVN LR G +I + + I+ L CGW Q+D SE F FL L+ P L L LFH GK D D ++ ER L LA+P
Sbjct: 144 SLLFAMFAKLDAFECMLKSTFPADDAR--RKLATLLRIWVNMLRSGKLIHTDLTKLIQETLSDCGWPDAKLLEQQDTSEAFAFLTETLQLPLLSLQVDLFHQGKGDKDDHKVVYERLLNLAIP 264
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Match: A0A0D9NJI1_METAN (USP domain-containing protein n=9 Tax=Metarhizium TaxID=5529 RepID=A0A0D9NJI1_METAN) HSP 1 Score: 90.9 bits (224), Expect = 1.120e-18 Identity = 56/123 (45.53%), Postives = 68/123 (55.28%), Query Frame = 1
Query: 1 SLLFAMFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNFIRSHLHACGWHGGPST-QEDVSELFTFLVCLLRCPALPLSEALFHGGKTDAGDSRISTERALYLALP 366
SLLFAMFA LDAF+ +L PA D +KL LR WVN LR G +I + + I+ L CGW Q+D SE F FL L+ P L L LFH GK D D ++ ER L LA+P
Sbjct: 97 SLLFAMFAKLDAFECMLKSTFPADDA-RLKLATL-LRIWVNMLRSGKLIRTDLTKLIQESLSDCGWADAKLLEQQDTSEAFAFLTETLQLPLLSLQVDLFHQGKGDKDDHKVVYERLLNLAIP 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61641.13716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61641.13716.1 >prot_H-elongata_contig61641.13716.1 ID=prot_H-elongata_contig61641.13716.1|Name=mRNA_H-elongata_contig61641.13716.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp MFATLDAFDWLLLKPLPAKDPPEVKLLQKHLRFWVNQLRRGTIIPREHSNback to top mRNA from alignment at H-elongata_contig61641:88..1786- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61641.13716.1 ID=mRNA_H-elongata_contig61641.13716.1|Name=mRNA_H-elongata_contig61641.13716.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1699bp|location=Sequence derived from alignment at H-elongata_contig61641:88..1786- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61641:88..1786- >mRNA_H-elongata_contig61641.13716.1 ID=mRNA_H-elongata_contig61641.13716.1|Name=mRNA_H-elongata_contig61641.13716.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig61641:88..1786- (Himanthalia elongata Himel1 dioecious)back to top |