prot_H-elongata_contig6164.13715.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6164.13715.1
Unique Nameprot_H-elongata_contig6164.13715.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A836CIL5_9STRA (Dynein light chain roadblock n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL5_9STRA)

HSP 1 Score: 169 bits (428), Expect = 8.770e-53
Identity = 80/101 (79.21%), Postives = 92/101 (91.09%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAGVA 101
            ++VEETLERIKVQPGVEGYVICDM+GQVLRR PTMSQETAE YA +M HLA KARGVVRDLNPK E+ Y+RIRAKRHE++ AFD++FLAI+IQRWQPAG +
Sbjct:    2 AQVEETLERIKVQPGVEGYVICDMQGQVLRRFPTMSQETAEMYAASMMHLAHKARGVVRDLNPKSELNYLRIRAKRHEVMVAFDKEFLAIVIQRWQPAGTS 102          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: D7FWL6_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL6_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.720e-47
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRD 86
            SEVEETLERIKVQPGVEGYVICDMEGQVLRR PTMSQETAE YAEAMRHLALKARGVVRD+NPKGE+KYMRIRAKRHE+L AF  +
Sbjct:    2 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGELKYMRIRAKRHEVLVAFGEE 87          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A6T7GUX9_9STRA (Dynein light chain roadblock n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7GUX9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.830e-45
Identity = 72/99 (72.73%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAG 99
            SEVEETLER+KVQ GVEGYVIC+ +G VLRR P MSQE AE YA++MRHLA KARGVVRDLNP+ E++Y+RIRAKRHE++ AFD +FL I+IQ+W PAG
Sbjct:    2 SEVEETLERVKVQNGVEGYVICNRQGLVLRRFPQMSQEHAEQYADSMRHLANKARGVVRDLNPQNELRYLRIRAKRHEVMIAFDNEFLVIVIQKWTPAG 100          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A6U1LT09_9STRA (Dynein light chain roadblock n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LT09_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.130e-44
Identity = 69/99 (69.70%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAG 99
            SEVEETLER+KVQPGVEGYVIC+ +GQVLRR P+M Q+ AE YA++MR LA KARGVVRDLNP+ E++Y+RIRA+R E++ A+D +FL I+IQRWQPA 
Sbjct:    2 SEVEETLERVKVQPGVEGYVICNKQGQVLRRFPSMRQDLAELYADSMRCLAAKARGVVRDLNPQHELRYLRIRARREEVMVAYDNEFLVIVIQRWQPAA 100          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: F0Y2Y8_AURAN (Dynein light chain roadblock n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Y8_AURAN)

HSP 1 Score: 147 bits (371), Expect = 4.170e-44
Identity = 69/99 (69.70%), Postives = 84/99 (84.85%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAG 99
            SEVEETLER+K+Q GVEGYVIC  +GQVLRRLP+M+Q  AE YA+ M  L+ KARGVVRDLNPK E++Y+R+RAKRHE+L AFD++FL I+IQRW PA 
Sbjct:    2 SEVEETLERVKIQAGVEGYVICSKQGQVLRRLPSMTQAQAEIYADFMSQLSRKARGVVRDLNPKNELRYLRLRAKRHEVLVAFDQEFLVIVIQRWTPAS 100          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A7S3H6W3_9STRA (Dynein light chain roadblock n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6W3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.850e-40
Identity = 67/99 (67.68%), Postives = 79/99 (79.80%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAG 99
            SEVEET+ERIKVQ GVEGYVIC+ +GQVLRR PTMS E AE YA  M  L  +ARGVVRDL+PK E+ Y+R+RAKRHEI+ A+D  F+ I+IQRW PA 
Sbjct:    2 SEVEETIERIKVQSGVEGYVICNKQGQVLRRFPTMSLEDAERYATTMISLTTQARGVVRDLDPKNELSYLRVRAKRHEIMVAYDVQFIVIVIQRWTPAA 100          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A812SWU6_SYMMI (DYNLRB1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SWU6_SYMMI)

HSP 1 Score: 128 bits (322), Expect = 7.180e-37
Identity = 63/83 (75.90%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAF 83
            SEVEET+ERIKVQPGVEGYVIC+ +GQVLRR PTM+QETAE Y+EAM  L+ +AR VVRDLNPK E+KY+R+RAKRHEI+ AF
Sbjct:    1 SEVEETIERIKVQPGVEGYVICNKQGQVLRRFPTMTQETAEQYSEAMMSLSSQARSVVRDLNPKNELKYLRVRAKRHEIMVAF 83          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A7S0SZ17_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ17_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.460e-34
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPA 98
            SEVE T+ERIK   GVEGYVIC+  GQVLRR PTMS + A+ YA  M  L  +ARGV+RDL+PK ++KY+R+R+K+HEI+ AFD  F+ II+QRW  A
Sbjct:    8 SEVEATIERIKRLNGVEGYVICNQVGQVLRRFPTMSPDVADEYATKMLSLTTQARGVIRDLSPKNDLKYLRVRSKKHEIMVAFDTQFVVIILQRWSAA 105          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A7S2F8W6_9STRA (Dynein light chain roadblock n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8W6_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.230e-34
Identity = 61/100 (61.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQE--TAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPA 98
            SEVEETLERIK + GVEGYVIC+  G VLRR P   ++   A  YAE+MR LA KAR VVRDL+P+ E++Y+RIRAK HE++ AFD +FL ++IQ+W+PA
Sbjct:    7 SEVEETLERIKEKEGVEGYVICNRHGDVLRRYPNEPKDFQDAAVYAESMRILAWKARSVVRDLDPENELQYLRIRAKTHEVIVAFDLEFLVVVIQKWEPA 106          
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Match: A0A7S1XSI3_9STRA (Dynein light chain roadblock n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSI3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.880e-34
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0
Query:    1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHLALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAGVA 101
            S+VEETLERIK++PGV GYVIC+ +G VLRR P+M+ E A+ YA AM+ LA KA GVVRD+NP   ++Y+RIR KR E++ A D  FL I+IQRW PA  A
Sbjct:    2 SDVEETLERIKMKPGVIGYVICNSDGTVLRRFPSMTPEQAQQYAAAMQKLAAKAGGVVRDMNPTDALEYLRIRCKRQEVVVARDDRFLVIVIQRWMPAEQA 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6164.13715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIL5_9STRA8.770e-5379.21Dynein light chain roadblock n=1 Tax=Tribonema min... [more]
D7FWL6_ECTSI1.720e-4789.53Robl_LC7 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6T7GUX9_9STRA1.830e-4572.73Dynein light chain roadblock n=1 Tax=Florenciella ... [more]
A0A6U1LT09_9STRA2.130e-4469.70Dynein light chain roadblock n=1 Tax=Fibrocapsa ja... [more]
F0Y2Y8_AURAN4.170e-4469.70Dynein light chain roadblock n=1 Tax=Aureococcus a... [more]
A0A7S3H6W3_9STRA5.850e-4067.68Dynein light chain roadblock n=1 Tax=Spumella elon... [more]
A0A812SWU6_SYMMI7.180e-3775.90DYNLRB1 protein (Fragment) n=1 Tax=Symbiodinium mi... [more]
A0A7S0SZ17_9STRA3.460e-3460.20Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2F8W6_9STRA4.230e-3461.00Dynein light chain roadblock n=1 Tax=Dictyocha spe... [more]
A0A7S1XSI3_9STRA4.880e-3460.40Dynein light chain roadblock n=1 Tax=Phaeomonas pa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004942Roadblock/LAMTOR2 domainSMARTSM00960Robl_LC7_a_2coord: 3..93
e-value: 1.9E-13
score: 60.7
IPR004942Roadblock/LAMTOR2 domainPFAMPF03259Robl_LC7coord: 3..86
e-value: 1.2E-16
score: 60.3
NoneNo IPR availableGENE3D3.30.450.30coord: 1..96
e-value: 6.5E-27
score: 95.5
NoneNo IPR availablePANTHERPTHR10779DYNEIN LIGHT CHAIN ROADBLOCKcoord: 1..95
NoneNo IPR availableSUPERFAMILY103196Roadblock/LC7 domaincoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6164contigH-elongata_contig6164:3565..5001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6164.13715.1mRNA_H-elongata_contig6164.13715.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6164 3565..5001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6164.13715.1 ID=prot_H-elongata_contig6164.13715.1|Name=mRNA_H-elongata_contig6164.13715.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
SEVEETLERIKVQPGVEGYVICDMEGQVLRRLPTMSQETAEFYAEAMRHL
ALKARGVVRDLNPKGEMKYMRIRAKRHEILAAFDRDFLAIIIQRWQPAGV
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004942Roadblock/LAMTOR2_dom