prot_H-elongata_contig11752.1370.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11752.1370.1
Unique Nameprot_H-elongata_contig11752.1370.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length339
Homology
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: D8LLN5_ECTSI (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN5_ECTSI)

HSP 1 Score: 460 bits (1183), Expect = 2.400e-156
Identity = 263/381 (69.03%), Postives = 292/381 (76.64%), Query Frame = 0
Query:    1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDG------SSSYQEA----------SERSSVLSA-----EEDN--GRREG----PPSHPSKSK-----------SKRQEPRRKSR-----ILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            +DVQLA+DGTRKLVSVLTSGEG GKKVETVIIPMLRGPQ++PRYTVCVSSQVGCAMNCQFC+TGRLGLMANLQAAQ+VEQVL AKRYLE+VGDP PVTGVVFMGMGEPFDNYDR VMRAVKILTDPRAGVRL+ SSVTVSTVGLVP+IERFC DP N ASLA+SLH+V   VRDK+IP+NRRYPLEQLSETLR HFP RSS     E  G      SS+   A          +ER S+        +E N   RR+G    PPS P++ +           SKR+ P+RK R     ILAVEYTLLGGVNDS  DA R+A+WLEG+ CVVNLITFN H GTPF P+S E ++AFRRAL  RG LCT RDSRGDDGMAACG
Sbjct:  189 EDVQLAADGTRKLVSVLTSGEGAGKKVETVIIPMLRGPQREPRYTVCVSSQVGCAMNCQFCFTGRLGLMANLQAAQIVEQVLVAKRYLETVGDPSPVTGVVFMGMGEPFDNYDR-VMRAVKILTDPRAGVRLKASSVTVSTVGLVPQIERFCKDPANGASLAISLHSVVDEVRDKLIPVNRRYPLEQLSETLRTHFP-RSSKPAADEPTGVALDHASSAAAPALGPKDVATGSAERKSMAGPGRKLEQETNLLARRDGAERRPPSIPTEPQQRPRSLADGGGSKREGPQRKGRRRRPRILAVEYTLLGGVNDSLGDAGRLAEWLEGVACVVNLITFNAHAGTPFSPSSPEAAEAFRRALAARGQLCTFRDSRGDDGMAACG 567          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A836CLG8_9STRA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLG8_9STRA)

HSP 1 Score: 301 bits (771), Expect = 5.070e-98
Identity = 162/334 (48.50%), Postives = 208/334 (62.28%), Query Frame = 0
Query:    6 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRA-GVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            A DGT KLV   + G  +G  VETV+IPML+GPQ++ RYTVCVSSQVGCAMNCQFC+TGR+GL+ANLQAAQ+VEQV+ AKR+L  +GD  P+TGVVFMGMGEPFDNY+  V +AV+++T+    G+RL    VTVSTVG+VP I +FC DP+ RA+LAVSLH      RD ++P+N+R+ LE L +                                             PP  P+  +          R+L ++YTLL GVN+S +D  R+      + CVVNLITFN H GTPFR A   T+ AF  A+   G LCT+R+S+GDDG +ACG
Sbjct:    3 AQDGTIKLVCKASHGTALGGAVETVVIPMLQGPQQKKRYTVCVSSQVGCAMNCQFCHTGRMGLLANLQAAQIVEQVVIAKRHLNEIGDTTPITGVVFMGMGEPFDNYEN-VSKAVQVMTEKSGTGLRLSAGRVTVSTVGIVPRIRQFCEDPNMRANLAVSLHATEDTTRDWLVPVNQRHDLETLMQP--------------------------------------------PPGTPANGQR---------RLLVIQYTLLRGVNNSLEDGVRLGALARRLHCVVNLITFNDHPGTPFRRAEEHTAAAFSAAVSASGTLCTLRESKGDDGASACG 282          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A061QU93_9CHLO (23S rRNA (Adenine2503-C2)-methyltransferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QU93_9CHLO)

HSP 1 Score: 276 bits (707), Expect = 5.740e-86
Identity = 156/337 (46.29%), Postives = 202/337 (59.94%), Query Frame = 0
Query:    2 DVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            DV  ASDGTRKLV  ++ G   G KVE V+IP+LR   ++ R T+CVSSQ+GCAMNCQFC TGR+GL  NL  AQ+VEQ++ A+RYL SVGD  P+T VVFMGMGEP  N D  V+ A  I   P  G+ +  + ++VSTVGLVPE+ERFC +  + A LAVSLH  +  VRD ++P+NRRYP+ +L  +LR  FP +         DG+ S +                                       R + +EY +L G+ND+ DDA R+ + LEGI   +NL+ FNPH GT F  ++ E    FR  L+  G +CTVRDSRGDD MAACG
Sbjct:  170 DVHEASDGTRKLVFRVSEGPAAGGKVEAVLIPILRSSGRKERITLCVSSQLGCAMNCQFCLTGRMGLGGNLLTAQIVEQLVEARRYLASVGDKTPITNVVFMGMGEPLHNLDA-VLAATSIFCHPM-GLHMSHNKISVSTVGLVPEMERFCRE--SSAQLAVSLHATTDEVRDWIVPVNRRYPIHELMASLRSLFPSQ---------DGAGSTR---------------------------------------RHVLIEYLMLRGINDTEDDARRLLELLEGIEAKINLLIFNPHVGTMFAASTDEQIARFRSILIQGGRVCTVRDSRGDDQMAACG 454          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A8J4CAH3_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CAH3_9CHLO)

HSP 1 Score: 266 bits (679), Expect = 1.570e-81
Identity = 154/344 (44.77%), Postives = 193/344 (56.10%), Query Frame = 0
Query:    1 QDVQLASDGTRKLVSVLTSGE------GVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            Q +  A DGTRKLV  L  GE      G    VETV+IPM     +  RYT C+S+QVGCAMNCQFCYTGR+GL+ANL  AQ+VEQV+ A+RYL     P+ +  +VFMGMGEP  NYD  VM A++IL     G+ L  + + VSTVGLVPE+ +F A     A LAVSLH  +  VRD ++P NRRYPL+QL   LR  FP                                                   + R+    + +EY LL GVND+ +DA+R+      I C+VNLI FNPH+GTPFR ++ E+ +AFR   L  G  CTVR S+GDD MAACG
Sbjct:  180 QSIHTARDGTRKLVFALLEGEHGSPAGGTHGTVETVLIPMTNRSGQNLRYTACLSTQVGCAMNCQFCYTGRMGLLANLATAQIVEQVVEARRYLAEQSVPIRIANIVFMGMGEPLHNYDA-VMAAIEILA---TGLELSRNKIIVSTVGLVPEMRKFIAA--GTAKLAVSLHATTDEVRDWIVPTNRRYPLDQLLGALREAFP--------------------------------------------------YDKRKGDNFVVIEYVLLAGVNDTLEDAQRLLAITTDIYCLVNLIVFNPHEGTPFRRSTEESVRAFRGVFLAAGRPCTVRTSKGDDEMAACG 467          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A250XDL1_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDL1_9CHLO)

HSP 1 Score: 262 bits (670), Expect = 1.650e-81
Identity = 150/338 (44.38%), Postives = 198/338 (58.58%), Query Frame = 0
Query:    1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            ++V  A DGTRK+   LT G   G  +ETV+IP++R   ++ R T+C+S+QVGCAMNCQFCYTGR+GL+ NL  AQ+VEQ++ AKRYL   GD  P+T VVFMGMGEP  N + +V+ A++I+  P  G+ +    +TVSTVGLVPEI  F +   ++  LAVSLH  +  VRD ++P+NRR+ LE L   L   FP           DG                 ED                       +SRI+ +EY +L GVND+ +DA R+ + L  +R  +NLI FNPH GT F P+  E    FR  L+  G +CTVRDSRGDD MAACG
Sbjct:   96 KEVVTAKDGTRKMAFKLTEGPAKGGVIETVLIPVVREAGQRCRITICLSTQVGCAMNCQFCYTGRMGLLGNLSTAQVVEQIVHAKRYLAEQGDRTPLTNVVFMGMGEPLHNME-VVLNAIEIMKCP-LGLHMSPGKLTVSTVGLVPEIREFVSR-SSKVQLAVSLHATTDEVRDWIVPVNRRHNLESLVSCLGELFP----------IDG-----------------ED-----------------------RSRIVLIEYIMLRGVNDTEEDAHRLLNLLSKVRAKINLILFNPHAGTKFLPSETEVVSRFRSILIQGGRVCTVRDSRGDDEMAACG 380          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A4D9CUA2_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 7.150e-81
Identity = 156/349 (44.70%), Postives = 203/349 (58.17%), Query Frame = 0
Query:    4 QLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLE-------------SVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQ-LSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            ++A DGT+KLV  +T G G G+ VE V+IPM+RGP+++PR+T+CVSSQ GCAM C FC+TG++GL+ +L A Q+V Q + A+R                  G+  P+  VVFMGMGEPFDNY   V +A+ ILT+ R  + L  + +TVSTVGLVP I+RF  +   R  LAVSLH  +  VR   +PINRRYPL   L  +LRRHFP                         +  A    GRRE                RR+   +A+EY LL GVND   DAER+A   EG+ CV+NLI FN H+G  F PAS +  ++FRR L G G L TVR+S+G + M ACG
Sbjct:   80 KIAGDGTQKLVMQVTDGPGKGQAVEAVLIPMVRGPEQRPRFTLCVSSQSGCAMACAFCHTGKMGLLTSLTAGQIVGQWVLARRLXXXXXXXXXXXXXEGETGNERPILRVVFMGMGEPFDNYAE-VTKALSILTEQRGKLLLGPNKITVSTVGLVPFIDRFVEE--TRCMLAVSLHATTDEVRSSFMPINRRYPLSSSLLPSLRRHFP-------------------------LPRAATSTGRRE----------------RRRRGPVALEYLLLAGVNDDEKDAERLAAMTEGMDCVINLIHFNSHEGADFLPASPDAIRSFRRILKGHGRLSTVRESKGAEEMGACG 384          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A2K3E0Y6_CHLRE (Radical SAM core domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E0Y6_CHLRE)

HSP 1 Score: 266 bits (679), Expect = 8.130e-81
Identity = 159/360 (44.17%), Postives = 208/360 (57.78%), Query Frame = 0
Query:    6 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSAL-------------------------RKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKR--QEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            ASDGTRKLV  L  GE  G  +ETV+IP++R    + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL  AQ+VEQV+ A+R+L   GD  P+T +VFMGMGEP  N +  V+ A  I++    G+ +  + +T+STVGLVPE+    A    R  +A+SLH  +  VRD ++P+NRRY L  L+  L   FP    A                                 ++      E    L   E  G  + P S  S S      +   ++ R L VEYT+L G+ND+ DDA R+AD L  + C VNLI FNPHKGT F+P++ E   AFR AL+  G++CT+RDSRGDD MAACG
Sbjct:  186 ASDGTRKLVFTLLGGEAAGGSIETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLSTAQIVEQVVEARRFLAQEGDRTPLTNLVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKITISTVGLVPEMRAVLAR--TRVQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEEEAAIGSLXXXXXXXXXXXXXXXXXXXXXXXXXLGAAADVSSGPESERWLPPVEQLGS-DAPSSSSSGSXXXXXGKGSSKEGRSLLVEYTMLHGINDTLDDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRSALIRSGMVCTIRDSRGDDEMAACG 540          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A835TBN4_CHLIN (Radical SAM core domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TBN4_CHLIN)

HSP 1 Score: 266 bits (679), Expect = 8.130e-81
Identity = 158/361 (43.77%), Postives = 206/361 (57.06%), Query Frame = 0
Query:    6 ASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQ----------------------------EASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            ASDGTRKLV  L  GE  G  VETV+IP++R    + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL  AQ+VEQV+ A+R+L   GD  P+T +VFMGMGEP  N +  V+ A  I++    G+ +  + +T+STVGLVPE+    A    R  +A+SLH  +  VRD ++P+NRRY L  L+  L   FP                                              E+ E    L   E  G      S  S S    +   ++ R L VEYT+L G+ND+ +DA R+AD L  + C VNLI FNPHKGT F+P++ E   AFR AL+ +G++CT+RDSRGDD MAACG
Sbjct:  184 ASDGTRKLVFTLVGGEAAGGNVETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGDRTPLTNMVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKITISTVGLVPEMRTVLAR--TRVQVALSLHATTDEVRDWIVPVNRRYDLATLTAALEEMFPKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPESQESERWLPPVEQLGGDAPSSSRGSSSNEAGKGSSKEGRSLLVEYTMLHGINDTLEDAHRLADMLRRVNCKVNLIVFNPHKGTRFQPSTDEDISAFRSALIQQGMVCTIRDSRGDDEMAACG 540          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: D8UF95_VOLCA (Radical SAM core domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UF95_VOLCA)

HSP 1 Score: 257 bits (656), Expect = 1.010e-80
Identity = 149/336 (44.35%), Postives = 195/336 (58.04%), Query Frame = 0
Query:    3 VQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            V  A+DGTRKLV  LT GE  G  VETV+IP++R    + R T+CVSSQVGCAMNCQFCYTGR+GL+ NL  AQ+VEQV+ A+R+L   G+   +T +VFMGMGEP  N +  V+ A  I++    G+ +  + VT+STVGLVPE+    A   +R  +A+SLH  +  VRD ++P+NRRY L  L+  L              E  G+SS                                        SR L +EYT+L G+ND+  DA R+   L  + C VNLI FNPH GT F+P++ E   AFR AL+  G++CT+RDSRGDD MAACG
Sbjct:    8 VARAADGTRKLVFTLTEGEAAGGSVETVLIPIVRQQGLRDRLTICVSSQVGCAMNCQFCYTGRMGLLGNLTTAQIVEQVVEARRFLAQEGERTQLTNLVFMGMGEPLHNTEA-VLAAADIVSH-YLGLHISHNKVTISTVGLVPEMRSVVAR--SRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAAL--------------EELGNSS----------------------------------------SRSLLIEYTMLHGINDTLQDAHRLVAMLARVNCKVNLIMFNPHAGTRFQPSTEEAVTAFRSALVQAGMVCTIRDSRGDDEMAACG 285          
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Match: A0A835XTN2_9CHLO (Radical SAM core domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XTN2_9CHLO)

HSP 1 Score: 263 bits (673), Expect = 6.620e-80
Identity = 163/374 (43.58%), Postives = 212/374 (56.68%), Query Frame = 0
Query:    1 QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSSQVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGVVFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIERFCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFP---GRSSALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSH-----------PSKSKSKRQ----------------------EPRRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTPFRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG 338
            + V  A+DGTRKLV  LT GE  G  VETV+IP++R    + R T+CVSSQVGCAMNCQFC+TGR+GL+ +L AAQ+VEQV++A+R+L + GD  P+T +VFMGMGEP  N +  V+ A +I+     G+ L  + +T+STVGLVPE+ +  A   +R  +A+SLH  +  VRD ++P+NRRY L  L+  L   FP   G  +    T      +   AS                G P             PS S S                         EP    R L VEYT+L GVND+ +DA R+A  L  + C VNLI FNPH GT FRP++ E   AFR  L+  GL+CT+RDSRGDD MAACG
Sbjct:  186 KQVVSAADGTRKLVFTLTEGEAKGGSVETVLIPVVRQAGLRDRLTICVSSQVGCAMNCQFCFTGRMGLLGSLSAAQIVEQVVAARRFLAAEGDRTPLTNLVFMGMGEPLHNTEA-VLTAAEIMNH-HLGLHLSYNKITISTVGLVPEMRQVAAR--SRVQMALSLHATTDEVRDWIVPVNRRYDLATLTAALEEIFPRKEGPRTPPAPTHAPADCAEPSASXXXXXXXXXXXXXSAAGEPQRWLPPLERLAPAPSTSPSSXXXXXXXXSSTPSTAAGPGPVGGWEPGSGGRSLLVEYTMLYGVNDTQEDARRLASMLSRVNCKVNLICFNPHAGTRFRPSTDEAICAFRSVLIQSGLVCTIRDSRGDDEMAACG 555          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11752.1370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLN5_ECTSI2.400e-15669.03Radical SAM core domain-containing protein n=2 Tax... [more]
A0A836CLG8_9STRA5.070e-9848.50Radical SAM core domain-containing protein (Fragme... [more]
A0A061QU93_9CHLO5.740e-8646.2923S rRNA (Adenine2503-C2)-methyltransferase n=1 Ta... [more]
A0A8J4CAH3_9CHLO1.570e-8144.77Radical SAM core domain-containing protein n=1 Tax... [more]
A0A250XDL1_9CHLO1.650e-8144.38Radical SAM core domain-containing protein n=1 Tax... [more]
A0A4D9CUA2_9STRA7.150e-8144.70Radical SAM core domain-containing protein n=1 Tax... [more]
A0A2K3E0Y6_CHLRE8.130e-8144.17Radical SAM core domain-containing protein n=2 Tax... [more]
A0A835TBN4_CHLIN8.130e-8143.77Radical SAM core domain-containing protein n=1 Tax... [more]
D8UF95_VOLCA1.010e-8044.35Radical SAM core domain-containing protein (Fragme... [more]
A0A835XTN2_9CHLO6.620e-8043.58Radical SAM core domain-containing protein n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 239..331
e-value: 2.6E-19
score: 71.4
coord: 1..208
e-value: 2.4E-59
score: 202.7
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 49..192
e-value: 1.1E-8
score: 35.6
IPR004383Ribosomal RNA large subunit methyltransferase RlmN/CfrPIRSFPIRSF006004Cfrcoord: 1..204
e-value: 2.7E-57
score: 190.4
coord: 243..338
e-value: 2.6E-22
score: 75.3
NoneNo IPR availablePANTHERPTHR30544:SF3RADICAL SAM SUPERFAMILY PROTEINcoord: 1..338
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 43..194
IPR040072Methyltransferase (Class A)PANTHERPTHR3054423S RRNA METHYLTRANSFERASEcoord: 1..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11752contigH-elongata_contig11752:459..4714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11752.1370.1mRNA_H-elongata_contig11752.1370.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11752 459..4714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11752.1370.1 ID=prot_H-elongata_contig11752.1370.1|Name=mRNA_H-elongata_contig11752.1370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=339bp
QDVQLASDGTRKLVSVLTSGEGVGKKVETVIIPMLRGPQKQPRYTVCVSS
QVGCAMNCQFCYTGRLGLMANLQAAQMVEQVLSAKRYLESVGDPVPVTGV
VFMGMGEPFDNYDRLVMRAVKILTDPRAGVRLRGSSVTVSTVGLVPEIER
FCADPDNRASLAVSLHTVSGAVRDKVIPINRRYPLEQLSETLRRHFPGRS
SALRKTETDGSSSYQEASERSSVLSAEEDNGRREGPPSHPSKSKSKRQEP
RRKSRILAVEYTLLGGVNDSADDAERVADWLEGIRCVVNLITFNPHKGTP
FRPASLETSKAFRRALLGRGLLCTVRDSRGDDGMAACG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR007197rSAM
IPR004383rRNA_lsu_MTrfase_RlmN/Cfr
IPR040072Methyltransferase_A